RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 C1orf134Q5TEV5 83 aa10.38□□□□□ -0.75
PDZRN3-201ENST00000263666 KRTAP26-1Q6PEX3 210 aa10.38□□□□□ -0.75
PDZRN3-201ENST00000263666 EPM2AB3EWF7 344 aa10.38□□□□□ -0.75
PDZRN3-201ENST00000263666 IGFL1Q6UW32 110 aa10.38□□□□□ -0.75
PDZRN3-201ENST00000263666 BCE1O60756 84 aa10.37□□□□□ -0.75
PDZRN3-201ENST00000263666 H0Y9P7 68 aa10.36□□□□□ -0.75
PDZRN3-201ENST00000263666 AKAP9Q99996 3911 aa10.36□□□□□ -0.75
PDZRN3-201ENST00000263666 IGHV6-1A0A0B4J1U7 121 aa10.35□□□□□ -0.75
PDZRN3-201ENST00000263666 Q5XG85 94 aa10.35□□□□□ -0.75
PDZRN3-201ENST00000263666 IGLV5-52A0A0A0MRZ9 124 aa10.33□□□□□ -0.76
PDZRN3-201ENST00000263666 NBDYA0A0U1RRE5 68 aa10.33□□□□□ -0.76
PDZRN3-201ENST00000263666 F8WDY8 70 aa10.32□□□□□ -0.76
PDZRN3-201ENST00000263666 FAM229BQ4G0N7 80 aa10.32□□□□□ -0.76
PDZRN3-201ENST00000263666 OCR1Q9BZK8 76 aa10.32□□□□□ -0.76
PDZRN3-201ENST00000263666 IGLV5-48A0A075B6I7 105 aa10.3□□□□□ -0.76
PDZRN3-201ENST00000263666 RETNLBQ9BQ08 111 aa10.29□□□□□ -0.76
PDZRN3-201ENST00000263666 ANAPC11Q9NYG5 84 aa10.29□□□□□ -0.76
PDZRN3-201ENST00000263666 C16orf90A8MZG2 172 aa10.29□□□□□ -0.76
PDZRN3-201ENST00000263666 CHKB-CPT1BH3BT56 60 aa10.29□□□□□ -0.76
PDZRN3-201ENST00000263666 DSCR10P59022 87 aa10.29□□□□□ -0.76
PDZRN3-201ENST00000263666 PRO0628Q9UI54 55 aa10.29□□□□□ -0.76
PDZRN3-201ENST00000263666 FP248Q71RG6 208 aaPredicted RBP10.28□□□□□ -0.76
PDZRN3-201ENST00000263666 C1orf64Q8NEQ6 169 aa10.28□□□□□ -0.76
PDZRN3-201ENST00000263666 WWC2-AS2Q96NR7 200 aa10.27□□□□□ -0.76
PDZRN3-201ENST00000263666 C1orf195Q5TG92 126 aa10.26□□□□□ -0.77
PDZRN3-201ENST00000263666 PRR15LQ9BU68 103 aa10.25□□□□□ -0.77
PDZRN3-201ENST00000263666 CIRBP-AS1Q8TBR5 109 aa10.25□□□□□ -0.77
PDZRN3-201ENST00000263666 SRRM2Q9UQ35 2752 aaKnown RBP10.24□□□□□ -0.77
PDZRN3-201ENST00000263666 KRTAP1-5Q9BYS1 174 aa10.24□□□□□ -0.77
PDZRN3-201ENST00000263666 TLX1NBP0CAT3 122 aa10.23□□□□□ -0.77
PDZRN3-201ENST00000263666 MOBPQ13875 183 aa10.23□□□□□ -0.77
PDZRN3-201ENST00000263666 ANK3Q12955 4377 aaKnown RBP10.23□□□□□ -0.77
PDZRN3-201ENST00000263666 A6NED7 52 aa10.21□□□□□ -0.77
PDZRN3-201ENST00000263666 A8MUN3 132 aa10.2□□□□□ -0.78
PDZRN3-201ENST00000263666 APLNQ9ULZ1 77 aa10.19□□□□□ -0.78
PDZRN3-201ENST00000263666 C4orf48Q5BLP8 95 aa10.18□□□□□ -0.78
PDZRN3-201ENST00000263666 hDV103S1A0JD37 113 aa10.17□□□□□ -0.78
PDZRN3-201ENST00000263666 PLA2G2DQ9UNK4 145 aa10.16□□□□□ -0.78
PDZRN3-201ENST00000263666 KRTAP7-1Q8IUC3 87 aa10.15□□□□□ -0.78
PDZRN3-201ENST00000263666 RTL8CO15255 209 aa10.13□□□□□ -0.79
PDZRN3-201ENST00000263666 SPRR1AP35321 89 aa10.13□□□□□ -0.79
PDZRN3-201ENST00000263666 PMAIP1Q13794 54 aa10.13□□□□□ -0.79
PDZRN3-201ENST00000263666 SPRR4Q96PI1 79 aa10.12□□□□□ -0.79
PDZRN3-201ENST00000263666 A0A1B0GW54 56 aa10.12□□□□□ -0.79
PDZRN3-201ENST00000263666 SPAG11AQ6PDA7 123 aa10.12□□□□□ -0.79
PDZRN3-201ENST00000263666 PRR15Q8IV56 129 aa10.12□□□□□ -0.79
PDZRN3-201ENST00000263666 V9GYY9 64 aa10.12□□□□□ -0.79
PDZRN3-201ENST00000263666 TRAV22A0A0B4J277 110 aa10.11□□□□□ -0.79
PDZRN3-201ENST00000263666 A8MWP4 228 aa10.1□□□□□ -0.79
PDZRN3-201ENST00000263666 KRTAP4-16G5E9R7 235 aaPredicted RBP10.1□□□□□ -0.79
PDZRN3-201ENST00000263666 CSMD3Q7Z407 3707 aa10.09□□□□□ -0.79
PDZRN3-201ENST00000263666 IGLV5-37A0A075B6J1 123 aa10.09□□□□□ -0.79
PDZRN3-201ENST00000263666 C9orf163Q8N9P6 203 aa10.08□□□□□ -0.8
PDZRN3-201ENST00000263666 KRTAP11-1Q8IUC1 163 aa10.07□□□□□ -0.8
PDZRN3-201ENST00000263666 TNP2Q05952 138 aa10.07□□□□□ -0.8
PDZRN3-201ENST00000263666 ZNF706Q9Y5V0 76 aaPredicted RBP10.07□□□□□ -0.8
PDZRN3-201ENST00000263666 TGP01266 2768 aa10.06□□□□□ -0.8
PDZRN3-201ENST00000263666 PANO1I0J062 215 aa10.05□□□□□ -0.8
PDZRN3-201ENST00000263666 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.05□□□□□ -0.8
PDZRN3-201ENST00000263666 A0A087WTM6 91 aa10.03□□□□□ -0.8
PDZRN3-201ENST00000263666 CNBPP62633 177 aaKnown RBP10.02□□□□□ -0.81
PDZRN3-201ENST00000263666 COL7A1Q02388 2944 aa10.02□□□□□ -0.81
PDZRN3-201ENST00000263666 COA5Q86WW8 74 aa9.99□□□□□ -0.81
PDZRN3-201ENST00000263666 PSORS1C2Q9UIG4 136 aa9.99□□□□□ -0.81
PDZRN3-201ENST00000263666 C8orf17Q9NRJ1 99 aa9.96□□□□□ -0.82
PDZRN3-201ENST00000263666 SPINK1P00995 79 aa9.93□□□□□ -0.82
PDZRN3-201ENST00000263666 SPACA4Q8TDM5 124 aa9.92□□□□□ -0.82
PDZRN3-201ENST00000263666 IGKV2D-30A0A075B6S6 120 aa9.92□□□□□ -0.82
PDZRN3-201ENST00000263666 IGKV2-30P06310 120 aa9.92□□□□□ -0.82
PDZRN3-201ENST00000263666 LIMD2Q9BT23 127 aa9.9□□□□□ -0.82
PDZRN3-201ENST00000263666 MRPL34Q9BQ48 92 aaKnown RBP9.89□□□□□ -0.83
PDZRN3-201ENST00000263666 LINC00472Q9H8W2 130 aa9.88□□□□□ -0.83
PDZRN3-201ENST00000263666 MMP24-AS1A0A0U1RRL7 71 aa9.87□□□□□ -0.83
PDZRN3-201ENST00000263666 A0A1B0GVX0 72 aa9.87□□□□□ -0.83
PDZRN3-201ENST00000263666 TP53AIP1Q9HCN2 124 aa9.86□□□□□ -0.83
PDZRN3-201ENST00000263666 PRR26Q8N8Z3 221 aa9.86□□□□□ -0.83
PDZRN3-201ENST00000263666 H3BPC8 53 aa9.85□□□□□ -0.83
PDZRN3-201ENST00000263666 ZNF861PO60384 105 aa9.85□□□□□ -0.83
PDZRN3-201ENST00000263666 A8MU10 97 aa9.84□□□□□ -0.83
PDZRN3-201ENST00000263666 IGLV8-61A0A075B6I0 122 aa9.83□□□□□ -0.84
PDZRN3-201ENST00000263666 ZCCHC13Q8WW36 166 aaKnown RBP9.81□□□□□ -0.84
PDZRN3-201ENST00000263666 SMR3BP02814 79 aaPredicted RBP9.81□□□□□ -0.84
PDZRN3-201ENST00000263666 Q1T7F1 81 aa9.8□□□□□ -0.84
PDZRN3-201ENST00000263666 CYP4F30PQ9H0H9 118 aa9.8□□□□□ -0.84
PDZRN3-201ENST00000263666 CD164Q04900 197 aa9.8□□□□□ -0.84
PDZRN3-201ENST00000263666 A0A087X002 238 aa9.79□□□□□ -0.84
PDZRN3-201ENST00000263666 NOTCH2NLQ7Z3S9 236 aa9.79□□□□□ -0.84
PDZRN3-201ENST00000263666 SEC61GP60059 68 aa9.79□□□□□ -0.84
PDZRN3-201ENST00000263666 KRTAP29-1A8MX34 341 aaPredicted RBP9.78□□□□□ -0.84
PDZRN3-201ENST00000263666 Q8N9P0 234 aaPredicted RBP9.78□□□□□ -0.84
PDZRN3-201ENST00000263666 LINC00313P59037 77 aa9.76□□□□□ -0.85
PDZRN3-201ENST00000263666 FBN3Q75N90 2809 aa9.74□□□□□ -0.85
PDZRN3-201ENST00000263666 Q5VV11 94 aa9.74□□□□□ -0.85
PDZRN3-201ENST00000263666 SPRR1BP22528 89 aa9.73□□□□□ -0.85
PDZRN3-201ENST00000263666 SPANXA2-OT1Q8N9U9 137 aa9.73□□□□□ -0.85
PDZRN3-201ENST00000263666 LOC101927531A0A1B0GV80 90 aa9.73□□□□□ -0.85
PDZRN3-201ENST00000263666 IGLV7-43P04211 117 aa9.72□□□□□ -0.85
PDZRN3-201ENST00000263666 DMBT1Q9UGM3 2413 aaPredicted RBP9.72□□□□□ -0.85
PDZRN3-201ENST00000263666 FAM229AH3BQW9 127 aa9.69□□□□□ -0.86
PDZRN3-201ENST00000263666 PLA2G1BP04054 148 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms