RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 CSMD1Q96PZ7 3565 aa7.02□□□□□ -1.29
KPNA3-201ENST00000261667 IGLV7-46A0A075B6I9 117 aa7.02□□□□□ -1.29
KPNA3-201ENST00000261667 DEFB131BA0A096LNP1 70 aa7.02□□□□□ -1.29
KPNA3-201ENST00000261667 A0A0G2JQZ4 141 aa7.02□□□□□ -1.29
KPNA3-201ENST00000261667 A0A1W2PNN7 141 aa7.02□□□□□ -1.29
KPNA3-201ENST00000261667 FLNCQ14315 2725 aa7.02□□□□□ -1.29
KPNA3-201ENST00000261667 C14orf177Q52M58 125 aa7.01□□□□□ -1.29
KPNA3-201ENST00000261667 HELZ2Q9BYK8 2649 aaKnown RBP7.01□□□□□ -1.29
KPNA3-201ENST00000261667 COL12A1Q99715 3063 aa7.01□□□□□ -1.29
KPNA3-201ENST00000261667 UTP20O75691 2785 aaKnown RBP7.01□□□□□ -1.29
KPNA3-201ENST00000261667 CRYBG3Q68DQ2 2970 aa7.01□□□□□ -1.29
KPNA3-201ENST00000261667 DSCR10P59022 87 aa7□□□□□ -1.29
KPNA3-201ENST00000261667 TEP1Q99973 2627 aaKnown RBP7□□□□□ -1.29
KPNA3-201ENST00000261667 KMT2BQ9UMN6 2715 aaPredicted RBP6.99□□□□□ -1.29
KPNA3-201ENST00000261667 CIRBP-AS1Q8TBR5 109 aa6.99□□□□□ -1.29
KPNA3-201ENST00000261667 FAM104AQ969W3 186 aa6.99□□□□□ -1.29
KPNA3-201ENST00000261667 IGFL1Q6UW32 110 aa6.99□□□□□ -1.29
KPNA3-201ENST00000261667 MRPL34Q9BQ48 92 aaKnown RBP6.99□□□□□ -1.29
KPNA3-201ENST00000261667 CELSR1Q9NYQ6 3014 aa6.97□□□□□ -1.29
KPNA3-201ENST00000261667 GVQW2A0A096LPI5 108 aaPredicted RBP6.97□□□□□ -1.29
KPNA3-201ENST00000261667 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
KPNA3-201ENST00000261667 NBPF19A0A087WUL8 3843 aa6.97□□□□□ -1.29
KPNA3-201ENST00000261667 A0A0A0MQY5 61 aa6.96□□□□□ -1.3
KPNA3-201ENST00000261667 CR1P17927 2039 aa6.96□□□□□ -1.3
KPNA3-201ENST00000261667 IGLV5-48A0A075B6I7 105 aa6.94□□□□□ -1.3
KPNA3-201ENST00000261667 ZNF469Q96JG9 3925 aaPredicted RBP6.94□□□□□ -1.3
KPNA3-201ENST00000261667 C8orf17Q9NRJ1 99 aa6.94□□□□□ -1.3
KPNA3-201ENST00000261667 ADM2Q7Z4H4 148 aa6.93□□□□□ -1.3
KPNA3-201ENST00000261667 TENM4Q6N022 2769 aa6.93□□□□□ -1.3
KPNA3-201ENST00000261667 FLNAP21333 2647 aaKnown RBP6.92□□□□□ -1.3
KPNA3-201ENST00000261667 ITPR3Q14573 2671 aa6.92□□□□□ -1.3
KPNA3-201ENST00000261667 KRTAP16-1A8MUX0 517 aa6.92□□□□□ -1.3
KPNA3-201ENST00000261667 AKAP9Q99996 3911 aa6.91□□□□□ -1.3
KPNA3-201ENST00000261667 PLA2G1BP04054 148 aaKnown RBP6.89□□□□□ -1.31
KPNA3-201ENST00000261667 HRES1P13985 223 aa6.89□□□□□ -1.31
KPNA3-201ENST00000261667 LINC00612Q8N6U2 182 aa6.89□□□□□ -1.31
KPNA3-201ENST00000261667 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
KPNA3-201ENST00000261667 ASB16-AS1Q495Z4 193 aa6.88□□□□□ -1.31
KPNA3-201ENST00000261667 FAM168BA1KXE4 195 aa6.86□□□□□ -1.31
KPNA3-201ENST00000261667 IGLV1-50A0A075B6I6 118 aa6.85□□□□□ -1.31
KPNA3-201ENST00000261667 DMAC1Q96GE9 116 aa6.85□□□□□ -1.31
KPNA3-201ENST00000261667 SPRR4Q96PI1 79 aa6.85□□□□□ -1.31
KPNA3-201ENST00000261667 STAB1Q9NY15 2570 aa6.84□□□□□ -1.31
KPNA3-201ENST00000261667 PDZD2O15018 2839 aa6.84□□□□□ -1.31
KPNA3-201ENST00000261667 A0A1B0GVX0 72 aa6.84□□□□□ -1.31
KPNA3-201ENST00000261667 LINC01556Q5JQF7 62 aa6.84□□□□□ -1.31
KPNA3-201ENST00000261667 ZCCHC13Q8WW36 166 aaKnown RBP6.84□□□□□ -1.31
KPNA3-201ENST00000261667 RTL8CO15255 209 aa6.83□□□□□ -1.32
KPNA3-201ENST00000261667 FLG2Q5D862 2391 aaPredicted RBP6.83□□□□□ -1.32
KPNA3-201ENST00000261667 APCP25054 2843 aa6.83□□□□□ -1.32
KPNA3-201ENST00000261667 KRTAP1-3Q8IUG1 177 aa6.82□□□□□ -1.32
KPNA3-201ENST00000261667 CHD6Q8TD26 2715 aa6.82□□□□□ -1.32
KPNA3-201ENST00000261667 APLNQ9ULZ1 77 aa6.81□□□□□ -1.32
KPNA3-201ENST00000261667 CUBNO60494 3623 aa6.81□□□□□ -1.32
KPNA3-201ENST00000261667 LUZP6Q538Z0 58 aa6.81□□□□□ -1.32
KPNA3-201ENST00000261667 TEX15Q9BXT5 2789 aa6.8□□□□□ -1.32
KPNA3-201ENST00000261667 Q8NDZ9 215 aa6.8□□□□□ -1.32
KPNA3-201ENST00000261667 CNBPP62633 177 aaKnown RBP6.79□□□□□ -1.32
KPNA3-201ENST00000261667 ZANQ9Y493 2812 aa6.79□□□□□ -1.32
KPNA3-201ENST00000261667 ANK3Q12955 4377 aaKnown RBP6.78□□□□□ -1.32
KPNA3-201ENST00000261667 MXRA5Q9NR99 2828 aa6.78□□□□□ -1.32
KPNA3-201ENST00000261667 DMBT1Q9UGM3 2413 aaPredicted RBP6.76□□□□□ -1.33
KPNA3-201ENST00000261667 COL6A5A8TX70 2615 aa6.75□□□□□ -1.33
KPNA3-201ENST00000261667 DNAH10OSP0CZ25 163 aa6.75□□□□□ -1.33
KPNA3-201ENST00000261667 ROMO1P60602 79 aa6.74□□□□□ -1.33
KPNA3-201ENST00000261667 PRR34Q9NV39 138 aa6.74□□□□□ -1.33
KPNA3-201ENST00000261667 TLX1NBP0CAT3 122 aa6.72□□□□□ -1.33
KPNA3-201ENST00000261667 NOTCH1P46531 2555 aa6.72□□□□□ -1.33
KPNA3-201ENST00000261667 A0A0D9SG42 100 aa6.72□□□□□ -1.33
KPNA3-201ENST00000261667 A0A1B0GU33 70 aa6.72□□□□□ -1.33
KPNA3-201ENST00000261667 NDUFAF8A1L188 74 aa6.72□□□□□ -1.33
KPNA3-201ENST00000261667 C15orf56Q8N910 161 aa6.72□□□□□ -1.33
KPNA3-201ENST00000261667 MMP24-AS1A0A0U1RRL7 71 aa6.71□□□□□ -1.33
KPNA3-201ENST00000261667 SPACA4Q8TDM5 124 aa6.71□□□□□ -1.34
KPNA3-201ENST00000261667 NBEAL1Q6ZS30 2694 aa6.71□□□□□ -1.34
KPNA3-201ENST00000261667 CHTF8P0CG12 524 aa6.7□□□□□ -1.34
KPNA3-201ENST00000261667 SPATA8Q6RVD6 105 aa6.7□□□□□ -1.34
KPNA3-201ENST00000261667 KRTAP25-1Q3LHN0 102 aa6.69□□□□□ -1.34
KPNA3-201ENST00000261667 Q6ZR54 194 aa6.69□□□□□ -1.34
KPNA3-201ENST00000261667 Q8N1X5 172 aa6.68□□□□□ -1.34
KPNA3-201ENST00000261667 BAHCC1Q9P281 2608 aa6.68□□□□□ -1.34
KPNA3-201ENST00000261667 LCE6AA0A183 80 aa6.68□□□□□ -1.34
KPNA3-201ENST00000261667 LY6G6CO95867 125 aa6.68□□□□□ -1.34
KPNA3-201ENST00000261667 KRTAP1-1Q07627 177 aa6.68□□□□□ -1.34
KPNA3-201ENST00000261667 GCN1Q92616 2671 aaKnown RBP6.67□□□□□ -1.34
KPNA3-201ENST00000261667 CSNK1G2-AS1Q8NCQ2 148 aa6.66□□□□□ -1.34
KPNA3-201ENST00000261667 H3BNG1 76 aa6.65□□□□□ -1.34
KPNA3-201ENST00000261667 PLA2G2DQ9UNK4 145 aa6.64□□□□□ -1.35
KPNA3-201ENST00000261667 Q96NJ1 140 aa6.64□□□□□ -1.35
KPNA3-201ENST00000261667 GIG44P09565 113 aaPredicted RBP6.63□□□□□ -1.35
KPNA3-201ENST00000261667 ITPR2Q14571 2701 aa6.63□□□□□ -1.35
KPNA3-201ENST00000261667 OTOGQ6ZRI0 2925 aa6.63□□□□□ -1.35
KPNA3-201ENST00000261667 IGLV7-43P04211 117 aa6.62□□□□□ -1.35
KPNA3-201ENST00000261667 IGLV5-37A0A075B6J1 123 aa6.62□□□□□ -1.35
KPNA3-201ENST00000261667 NUPR2A6NF83 97 aa6.62□□□□□ -1.35
KPNA3-201ENST00000261667 UNC79Q9P2D8 2635 aa6.62□□□□□ -1.35
KPNA3-201ENST00000261667 C19orf73Q9NVV2 129 aa6.62□□□□□ -1.35
KPNA3-201ENST00000261667 KRTAP29-1A8MX34 341 aaPredicted RBP6.6□□□□□ -1.35
KPNA3-201ENST00000261667 LINC00472Q9H8W2 130 aa6.59□□□□□ -1.35
KPNA3-201ENST00000261667 KRTAP24-1Q3LI83 254 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 205.5 ms