RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 PRO0628Q9UI54 55 aa10.29□□□□□ -0.76
SNCAIP-202ENST00000261368 KRTAP4-16G5E9R7 235 aaPredicted RBP10.29□□□□□ -0.76
SNCAIP-202ENST00000261368 SPRR1AP35321 89 aa10.28□□□□□ -0.76
SNCAIP-202ENST00000261368 PSPHP1O15172 72 aa10.26□□□□□ -0.77
SNCAIP-202ENST00000261368 TNP2Q05952 138 aa10.25□□□□□ -0.77
SNCAIP-202ENST00000261368 SRRM2Q9UQ35 2752 aaKnown RBP10.25□□□□□ -0.77
SNCAIP-202ENST00000261368 IGLV5-37A0A075B6J1 123 aa10.24□□□□□ -0.77
SNCAIP-202ENST00000261368 SPRR4Q96PI1 79 aa10.24□□□□□ -0.77
SNCAIP-202ENST00000261368 TENM2Q9NT68 2774 aa10.24□□□□□ -0.77
SNCAIP-202ENST00000261368 A0A1B0GW54 56 aa10.24□□□□□ -0.77
SNCAIP-202ENST00000261368 C1orf64Q8NEQ6 169 aa10.23□□□□□ -0.77
SNCAIP-202ENST00000261368 C16orf90A8MZG2 172 aa10.21□□□□□ -0.77
SNCAIP-202ENST00000261368 CASC2Q6XLA1 102 aa10.21□□□□□ -0.77
SNCAIP-202ENST00000261368 IGLV9-49A0A0B4J1Y8 123 aa10.21□□□□□ -0.78
SNCAIP-202ENST00000261368 K7EIL1 84 aa10.21□□□□□ -0.78
SNCAIP-202ENST00000261368 KRTAP1-5Q9BYS1 174 aa10.2□□□□□ -0.78
SNCAIP-202ENST00000261368 B9D2Q9BPU9 175 aa10.19□□□□□ -0.78
SNCAIP-202ENST00000261368 H0Y9P7 68 aa10.18□□□□□ -0.78
SNCAIP-202ENST00000261368 NDUFS5O43920 106 aa10.18□□□□□ -0.78
SNCAIP-202ENST00000261368 hDV103S1A0JD37 113 aa10.15□□□□□ -0.79
SNCAIP-202ENST00000261368 NDUFB1O75438 58 aa10.14□□□□□ -0.79
SNCAIP-202ENST00000261368 C14orf177Q52M58 125 aa10.14□□□□□ -0.79
SNCAIP-202ENST00000261368 CSMD3Q7Z407 3707 aa10.12□□□□□ -0.79
SNCAIP-202ENST00000261368 PCOTHQ58A44 107 aa10.11□□□□□ -0.79
SNCAIP-202ENST00000261368 KRTAP11-1Q8IUC1 163 aa10.1□□□□□ -0.79
SNCAIP-202ENST00000261368 CDK2AP2O75956 126 aa10.09□□□□□ -0.79
SNCAIP-202ENST00000261368 C1orf195Q5TG92 126 aa10.09□□□□□ -0.79
SNCAIP-202ENST00000261368 PRR15Q8IV56 129 aa10.07□□□□□ -0.8
SNCAIP-202ENST00000261368 TRAV22A0A0B4J277 110 aa10.05□□□□□ -0.8
SNCAIP-202ENST00000261368 A8MUN3 132 aa10.05□□□□□ -0.8
SNCAIP-202ENST00000261368 CNBPP62633 177 aaKnown RBP10.05□□□□□ -0.8
SNCAIP-202ENST00000261368 A8MWP4 228 aa10.05□□□□□ -0.8
SNCAIP-202ENST00000261368 ANK2Q01484 3957 aa10.04□□□□□ -0.8
SNCAIP-202ENST00000261368 IGHV6-1A0A0B4J1U7 121 aa10.03□□□□□ -0.8
SNCAIP-202ENST00000261368 ZCCHC13Q8WW36 166 aaKnown RBP10.03□□□□□ -0.8
SNCAIP-202ENST00000261368 COL7A1Q02388 2944 aa10.03□□□□□ -0.8
SNCAIP-202ENST00000261368 SPINK6Q6UWN8 80 aa10.03□□□□□ -0.8
SNCAIP-202ENST00000261368 ANAPC11Q9NYG5 84 aa10.01□□□□□ -0.81
SNCAIP-202ENST00000261368 CHKB-CPT1BH3BT56 60 aa10□□□□□ -0.81
SNCAIP-202ENST00000261368 PANO1I0J062 215 aa10□□□□□ -0.81
SNCAIP-202ENST00000261368 C9orf163Q8N9P6 203 aa10□□□□□ -0.81
SNCAIP-202ENST00000261368 LCE6AA0A183 80 aa9.99□□□□□ -0.81
SNCAIP-202ENST00000261368 MDFIQ99750 246 aa9.99□□□□□ -0.81
SNCAIP-202ENST00000261368 PRR15LQ9BU68 103 aa9.99□□□□□ -0.81
SNCAIP-202ENST00000261368 APLNQ9ULZ1 77 aa9.97□□□□□ -0.81
SNCAIP-202ENST00000261368 IGLV8-61A0A075B6I0 122 aa9.97□□□□□ -0.81
SNCAIP-202ENST00000261368 NBDYA0A0U1RRE5 68 aa9.97□□□□□ -0.81
SNCAIP-202ENST00000261368 SPTSSBQ8NFR3 76 aa9.97□□□□□ -0.81
SNCAIP-202ENST00000261368 MOBPQ13875 183 aa9.96□□□□□ -0.81
SNCAIP-202ENST00000261368 LINC00472Q9H8W2 130 aa9.95□□□□□ -0.82
SNCAIP-202ENST00000261368 CYP4F30PQ9H0H9 118 aa9.94□□□□□ -0.82
SNCAIP-202ENST00000261368 KRTAP29-1A8MX34 341 aaPredicted RBP9.94□□□□□ -0.82
SNCAIP-202ENST00000261368 Q1T7F1 81 aa9.93□□□□□ -0.82
SNCAIP-202ENST00000261368 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.93□□□□□ -0.82
SNCAIP-202ENST00000261368 V9GYY9 64 aa9.93□□□□□ -0.82
SNCAIP-202ENST00000261368 A6NED7 52 aa9.9□□□□□ -0.83
SNCAIP-202ENST00000261368 MMP24-AS1A0A0U1RRL7 71 aa9.89□□□□□ -0.83
SNCAIP-202ENST00000261368 DNAH10Q8IVF4 4471 aa9.88□□□□□ -0.83
SNCAIP-202ENST00000261368 H3BPC8 53 aa9.87□□□□□ -0.83
SNCAIP-202ENST00000261368 COA5Q86WW8 74 aa9.87□□□□□ -0.83
SNCAIP-202ENST00000261368 SPRR1BP22528 89 aa9.87□□□□□ -0.83
SNCAIP-202ENST00000261368 PMAIP1Q13794 54 aa9.86□□□□□ -0.83
SNCAIP-202ENST00000261368 CIRBP-AS1Q8TBR5 109 aa9.86□□□□□ -0.83
SNCAIP-202ENST00000261368 SPAG11AQ6PDA7 123 aa9.86□□□□□ -0.83
SNCAIP-202ENST00000261368 C8orf17Q9NRJ1 99 aa9.85□□□□□ -0.83
SNCAIP-202ENST00000261368 NUPR2A6NF83 97 aa9.84□□□□□ -0.83
SNCAIP-202ENST00000261368 A8MU10 97 aa9.83□□□□□ -0.84
SNCAIP-202ENST00000261368 PSORS1C2Q9UIG4 136 aa9.83□□□□□ -0.84
SNCAIP-202ENST00000261368 ZNF706Q9Y5V0 76 aaPredicted RBP9.83□□□□□ -0.84
SNCAIP-202ENST00000261368 SPANXA2-OT1Q8N9U9 137 aa9.82□□□□□ -0.84
SNCAIP-202ENST00000261368 RETNLBQ9BQ08 111 aa9.82□□□□□ -0.84
SNCAIP-202ENST00000261368 LIMD2Q9BT23 127 aa9.82□□□□□ -0.84
SNCAIP-202ENST00000261368 RTL8CO15255 209 aa9.82□□□□□ -0.84
SNCAIP-202ENST00000261368 Q8N9P0 234 aaPredicted RBP9.8□□□□□ -0.84
SNCAIP-202ENST00000261368 HUWE1Q7Z6Z7 4374 aaKnown RBP9.8□□□□□ -0.84
SNCAIP-202ENST00000261368 TGP01266 2768 aa9.79□□□□□ -0.84
SNCAIP-202ENST00000261368 TP53AIP1Q9HCN2 124 aa9.79□□□□□ -0.84
SNCAIP-202ENST00000261368 A0A087WTM6 91 aa9.79□□□□□ -0.84
SNCAIP-202ENST00000261368 A0A1B0GVX0 72 aa9.79□□□□□ -0.84
SNCAIP-202ENST00000261368 Q5VV11 94 aa9.79□□□□□ -0.84
SNCAIP-202ENST00000261368 SPACA4Q8TDM5 124 aa9.78□□□□□ -0.84
SNCAIP-202ENST00000261368 IGLV5-52A0A0A0MRZ9 124 aa9.77□□□□□ -0.85
SNCAIP-202ENST00000261368 CD164Q04900 197 aa9.77□□□□□ -0.85
SNCAIP-202ENST00000261368 LYSTQ99698 3801 aa9.77□□□□□ -0.85
SNCAIP-202ENST00000261368 MRPL34Q9BQ48 92 aaKnown RBP9.77□□□□□ -0.85
SNCAIP-202ENST00000261368 A0A087X002 238 aa9.74□□□□□ -0.85
SNCAIP-202ENST00000261368 NOTCH2NLQ7Z3S9 236 aa9.74□□□□□ -0.85
SNCAIP-202ENST00000261368 IGLV7-46A0A075B6I9 117 aa9.73□□□□□ -0.85
SNCAIP-202ENST00000261368 ZNF861PO60384 105 aa9.72□□□□□ -0.85
SNCAIP-202ENST00000261368 KRTAP13-1Q8IUC0 172 aa9.72□□□□□ -0.85
SNCAIP-202ENST00000261368 LY6G6CO95867 125 aa9.71□□□□□ -0.85
SNCAIP-202ENST00000261368 Q6ZRN7 208 aaPredicted RBP9.71□□□□□ -0.86
SNCAIP-202ENST00000261368 WWC2-AS2Q96NR7 200 aa9.71□□□□□ -0.86
SNCAIP-202ENST00000261368 Q96NJ1 140 aa9.7□□□□□ -0.86
SNCAIP-202ENST00000261368 SEC61GP60059 68 aa9.68□□□□□ -0.86
SNCAIP-202ENST00000261368 CMYA5Q8N3K9 4069 aa9.67□□□□□ -0.86
SNCAIP-202ENST00000261368 PRR26Q8N8Z3 221 aa9.66□□□□□ -0.86
SNCAIP-202ENST00000261368 C1orf134Q5TEV5 83 aa9.65□□□□□ -0.86
SNCAIP-202ENST00000261368 LOC101927531A0A1B0GV80 90 aa9.64□□□□□ -0.87
SNCAIP-202ENST00000261368 DNAH9Q9NYC9 4486 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms