RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 REG3GQ6UW15 175 aa10.1□□□□□ -0.79
LMNB1-201ENST00000261366 TRAV22A0A0B4J277 110 aa10.09□□□□□ -0.79
LMNB1-201ENST00000261366 V9GYY9 64 aa10.09□□□□□ -0.79
LMNB1-201ENST00000261366 A0A096LNI7 61 aa10.09□□□□□ -0.79
LMNB1-201ENST00000261366 A8MU10 97 aa10.08□□□□□ -0.8
LMNB1-201ENST00000261366 A8MUN3 132 aa10.08□□□□□ -0.8
LMNB1-201ENST00000261366 LINC00588Q9Y4M8 146 aa10.08□□□□□ -0.8
LMNB1-201ENST00000261366 TLX1NBP0CAT3 122 aa10.06□□□□□ -0.8
LMNB1-201ENST00000261366 DNAH10OSP0CZ25 163 aa10.06□□□□□ -0.8
LMNB1-201ENST00000261366 COL7A1Q02388 2944 aa10.06□□□□□ -0.8
LMNB1-201ENST00000261366 A0A1B0GW54 56 aa10.05□□□□□ -0.8
LMNB1-201ENST00000261366 MP68P56378 58 aa10.05□□□□□ -0.8
LMNB1-201ENST00000261366 Q1T7F1 81 aa10.04□□□□□ -0.8
LMNB1-201ENST00000261366 PLA2G2DQ9UNK4 145 aa10.04□□□□□ -0.8
LMNB1-201ENST00000261366 F8WDY8 70 aa10.04□□□□□ -0.8
LMNB1-201ENST00000261366 IGLV5-37A0A075B6J1 123 aa10.01□□□□□ -0.81
LMNB1-201ENST00000261366 UBE2AP49459 152 aa10□□□□□ -0.81
LMNB1-201ENST00000261366 H0Y9P7 68 aa9.99□□□□□ -0.81
LMNB1-201ENST00000261366 B9D2Q9BPU9 175 aa9.99□□□□□ -0.81
LMNB1-201ENST00000261366 TENM2Q9NT68 2774 aa9.99□□□□□ -0.81
LMNB1-201ENST00000261366 MGAM2Q2M2H8 2515 aa9.98□□□□□ -0.81
LMNB1-201ENST00000261366 DNAH10Q8IVF4 4471 aa9.98□□□□□ -0.81
LMNB1-201ENST00000261366 CASC2Q6XLA1 102 aa9.98□□□□□ -0.81
LMNB1-201ENST00000261366 LYSTQ99698 3801 aa9.98□□□□□ -0.81
LMNB1-201ENST00000261366 SEC61GP60059 68 aa9.97□□□□□ -0.81
LMNB1-201ENST00000261366 CHTF8P0CG12 524 aa9.97□□□□□ -0.81
LMNB1-201ENST00000261366 CYP4F30PQ9H0H9 118 aa9.97□□□□□ -0.81
LMNB1-201ENST00000261366 PRR15Q8IV56 129 aa9.96□□□□□ -0.81
LMNB1-201ENST00000261366 NDUFB1O75438 58 aa9.96□□□□□ -0.81
LMNB1-201ENST00000261366 DNAH3Q8TD57 4116 aa9.96□□□□□ -0.82
LMNB1-201ENST00000261366 H0Y9J4 135 aa9.95□□□□□ -0.82
LMNB1-201ENST00000261366 KRTAP11-1Q8IUC1 163 aa9.94□□□□□ -0.82
LMNB1-201ENST00000261366 PMAIP1Q13794 54 aa9.93□□□□□ -0.82
LMNB1-201ENST00000261366 PHF5AQ7RTV0 110 aaKnown RBP9.93□□□□□ -0.82
LMNB1-201ENST00000261366 CHKB-CPT1BH3BT56 60 aa9.93□□□□□ -0.82
LMNB1-201ENST00000261366 STAB2Q8WWQ8 2551 aa9.93□□□□□ -0.82
LMNB1-201ENST00000261366 CNBPP62633 177 aaKnown RBP9.92□□□□□ -0.82
LMNB1-201ENST00000261366 PRR15LQ9BU68 103 aa9.91□□□□□ -0.82
LMNB1-201ENST00000261366 KRTAP29-1A8MX34 341 aaPredicted RBP9.91□□□□□ -0.82
LMNB1-201ENST00000261366 Q5VV11 94 aa9.91□□□□□ -0.82
LMNB1-201ENST00000261366 PCOTHQ58A44 107 aa9.9□□□□□ -0.82
LMNB1-201ENST00000261366 SPTSSBQ8NFR3 76 aa9.89□□□□□ -0.83
LMNB1-201ENST00000261366 KRTAP1-5Q9BYS1 174 aa9.88□□□□□ -0.83
LMNB1-201ENST00000261366 K7EIL1 84 aa9.86□□□□□ -0.83
LMNB1-201ENST00000261366 Q8N9P0 234 aaPredicted RBP9.86□□□□□ -0.83
LMNB1-201ENST00000261366 C16orf90A8MZG2 172 aa9.85□□□□□ -0.83
LMNB1-201ENST00000261366 HUWE1Q7Z6Z7 4374 aaKnown RBP9.85□□□□□ -0.83
LMNB1-201ENST00000261366 A8MWP4 228 aa9.85□□□□□ -0.83
LMNB1-201ENST00000261366 DNAH1Q9P2D7 4330 aa9.82□□□□□ -0.84
LMNB1-201ENST00000261366 IGLV8-61A0A075B6I0 122 aa9.82□□□□□ -0.84
LMNB1-201ENST00000261366 LINC00472Q9H8W2 130 aa9.82□□□□□ -0.84
LMNB1-201ENST00000261366 IGLV9-49A0A0B4J1Y8 123 aa9.81□□□□□ -0.84
LMNB1-201ENST00000261366 COA5Q86WW8 74 aa9.8□□□□□ -0.84
LMNB1-201ENST00000261366 A6NED7 52 aa9.79□□□□□ -0.84
LMNB1-201ENST00000261366 NDUFS5O43920 106 aa9.79□□□□□ -0.84
LMNB1-201ENST00000261366 SPANXA2-OT1Q8N9U9 137 aa9.77□□□□□ -0.84
LMNB1-201ENST00000261366 MMP24-AS1A0A0U1RRL7 71 aa9.77□□□□□ -0.85
LMNB1-201ENST00000261366 C9orf163Q8N9P6 203 aa9.77□□□□□ -0.85
LMNB1-201ENST00000261366 SPAG11AQ6PDA7 123 aa9.77□□□□□ -0.85
LMNB1-201ENST00000261366 UBE2DNLQ8IWF7 75 aa9.76□□□□□ -0.85
LMNB1-201ENST00000261366 LIMD2Q9BT23 127 aa9.76□□□□□ -0.85
LMNB1-201ENST00000261366 DNAH9Q9NYC9 4486 aa9.75□□□□□ -0.85
LMNB1-201ENST00000261366 PANO1I0J062 215 aa9.73□□□□□ -0.85
LMNB1-201ENST00000261366 LCA10Q71F78 164 aa9.73□□□□□ -0.85
LMNB1-201ENST00000261366 H3BPC8 53 aa9.73□□□□□ -0.85
LMNB1-201ENST00000261366 CD164Q04900 197 aa9.73□□□□□ -0.85
LMNB1-201ENST00000261366 IGHV6-1A0A0B4J1U7 121 aa9.72□□□□□ -0.85
LMNB1-201ENST00000261366 MDFIQ99750 246 aa9.72□□□□□ -0.85
LMNB1-201ENST00000261366 ANAPC11Q9NYG5 84 aa9.69□□□□□ -0.86
LMNB1-201ENST00000261366 IGLV7-46A0A075B6I9 117 aa9.68□□□□□ -0.86
LMNB1-201ENST00000261366 SPRR1BP22528 89 aa9.67□□□□□ -0.86
LMNB1-201ENST00000261366 DNAH7Q8WXX0 4024 aa9.64□□□□□ -0.87
LMNB1-201ENST00000261366 A0A087X002 238 aa9.63□□□□□ -0.87
LMNB1-201ENST00000261366 Q75L30 129 aa9.63□□□□□ -0.87
LMNB1-201ENST00000261366 NOTCH2NLQ7Z3S9 236 aa9.63□□□□□ -0.87
LMNB1-201ENST00000261366 Q96NJ1 140 aa9.63□□□□□ -0.87
LMNB1-201ENST00000261366 C8orf17Q9NRJ1 99 aa9.63□□□□□ -0.87
LMNB1-201ENST00000261366 MOBPQ13875 183 aa9.63□□□□□ -0.87
LMNB1-201ENST00000261366 SPINK6Q6UWN8 80 aa9.61□□□□□ -0.87
LMNB1-201ENST00000261366 LOC101927531A0A1B0GV80 90 aa9.61□□□□□ -0.87
LMNB1-201ENST00000261366 CDK2AP2O75956 126 aa9.6□□□□□ -0.87
LMNB1-201ENST00000261366 SPINK7P58062 85 aa9.59□□□□□ -0.87
LMNB1-201ENST00000261366 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.59□□□□□ -0.87
LMNB1-201ENST00000261366 HRES1P13985 223 aa9.58□□□□□ -0.88
LMNB1-201ENST00000261366 KTN1-AS1Q86SY8 53 aa9.58□□□□□ -0.88
LMNB1-201ENST00000261366 ATP11AUNQ6ZP68 121 aa9.57□□□□□ -0.88
LMNB1-201ENST00000261366 C14orf177Q52M58 125 aa9.57□□□□□ -0.88
LMNB1-201ENST00000261366 PRR26Q8N8Z3 221 aa9.56□□□□□ -0.88
LMNB1-201ENST00000261366 TP53AIP1Q9HCN2 124 aa9.56□□□□□ -0.88
LMNB1-201ENST00000261366 PLECQ15149 4684 aaKnown RBP9.55□□□□□ -0.88
LMNB1-201ENST00000261366 A0A1B0GVX0 72 aa9.55□□□□□ -0.88
LMNB1-201ENST00000261366 APLNQ9ULZ1 77 aa9.54□□□□□ -0.88
LMNB1-201ENST00000261366 KRTAP13-1Q8IUC0 172 aa9.54□□□□□ -0.88
LMNB1-201ENST00000261366 RBM12B-AS1Q9P1G2 102 aa9.54□□□□□ -0.88
LMNB1-201ENST00000261366 CDC42SE1Q9NRR8 79 aa9.53□□□□□ -0.88
LMNB1-201ENST00000261366 FRAS1Q86XX4 4008 aa9.53□□□□□ -0.88
LMNB1-201ENST00000261366 MRPL34Q9BQ48 92 aaKnown RBP9.53□□□□□ -0.88
LMNB1-201ENST00000261366 LINC01558Q9Y6Z2 57 aa9.52□□□□□ -0.89
LMNB1-201ENST00000261366 Q6ZR54 194 aa9.51□□□□□ -0.89
LMNB1-201ENST00000261366 A6NN06 94 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms