RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 KRTAP1-1Q07627 177 aa9.24□□□□□ -0.93
C12orf49-201ENST00000261318 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.23□□□□□ -0.93
C12orf49-201ENST00000261318 TRIOO75962 3097 aa9.23□□□□□ -0.93
C12orf49-201ENST00000261318 SPRR1AP35321 89 aa9.23□□□□□ -0.93
C12orf49-201ENST00000261318 TEX15Q9BXT5 2789 aa9.22□□□□□ -0.93
C12orf49-201ENST00000261318 TRANK1O15050 2925 aa9.22□□□□□ -0.93
C12orf49-201ENST00000261318 PRAC1Q96KF2 57 aa9.18□□□□□ -0.94
C12orf49-201ENST00000261318 VPS13AQ96RL7 3174 aa9.18□□□□□ -0.94
C12orf49-201ENST00000261318 XIRP2A4UGR9 3374 aa9.18□□□□□ -0.94
C12orf49-201ENST00000261318 RANBP2P49792 3224 aaKnown RBP9.17□□□□□ -0.94
C12orf49-201ENST00000261318 LINC00472Q9H8W2 130 aa9.17□□□□□ -0.94
C12orf49-201ENST00000261318 CHD9Q3L8U1 2897 aa9.17□□□□□ -0.94
C12orf49-201ENST00000261318 DMAC1Q96GE9 116 aa9.17□□□□□ -0.94
C12orf49-201ENST00000261318 UNC79Q9P2D8 2635 aa9.16□□□□□ -0.94
C12orf49-201ENST00000261318 MAP1AP78559 2803 aaPredicted RBP9.16□□□□□ -0.94
C12orf49-201ENST00000261318 LAMA3Q16787 3333 aa9.16□□□□□ -0.94
C12orf49-201ENST00000261318 TNP2Q05952 138 aa9.16□□□□□ -0.94
C12orf49-201ENST00000261318 HTTP42858 3142 aa9.15□□□□□ -0.94
C12orf49-201ENST00000261318 ZCCHC13Q8WW36 166 aaKnown RBP9.15□□□□□ -0.94
C12orf49-201ENST00000261318 SPINK7P58062 85 aa9.15□□□□□ -0.94
C12orf49-201ENST00000261318 CSAG1Q6PB30 78 aa9.15□□□□□ -0.95
C12orf49-201ENST00000261318 OXTP01178 125 aa9.14□□□□□ -0.95
C12orf49-201ENST00000261318 Q6ZSA8 131 aa9.14□□□□□ -0.95
C12orf49-201ENST00000261318 H3BS24 57 aa9.14□□□□□ -0.95
C12orf49-201ENST00000261318 Q5W150 140 aa9.14□□□□□ -0.95
C12orf49-201ENST00000261318 STAB1Q9NY15 2570 aa9.13□□□□□ -0.95
C12orf49-201ENST00000261318 FRYQ5TBA9 3013 aa9.13□□□□□ -0.95
C12orf49-201ENST00000261318 CAMK2N1Q7Z7J9 78 aa9.12□□□□□ -0.95
C12orf49-201ENST00000261318 LINC00483Q53H64 154 aa9.12□□□□□ -0.95
C12orf49-201ENST00000261318 NOTCH1P46531 2555 aa9.11□□□□□ -0.95
C12orf49-201ENST00000261318 PLAC8Q9NZF1 115 aa9.1□□□□□ -0.95
C12orf49-201ENST00000261318 BRCA2P51587 3418 aa9.1□□□□□ -0.95
C12orf49-201ENST00000261318 SPRR1BP22528 89 aa9.1□□□□□ -0.95
C12orf49-201ENST00000261318 WDFY4Q6ZS81 3184 aa9.1□□□□□ -0.95
C12orf49-201ENST00000261318 FREM2Q5SZK8 3169 aa9.09□□□□□ -0.95
C12orf49-201ENST00000261318 CELSR3Q9NYQ7 3312 aa9.09□□□□□ -0.95
C12orf49-201ENST00000261318 S4R3F8 94 aa9.07□□□□□ -0.96
C12orf49-201ENST00000261318 PRUNE2Q8WUY3 3088 aa9.07□□□□□ -0.96
C12orf49-201ENST00000261318 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
C12orf49-201ENST00000261318 NBEAL2Q6ZNJ1 2754 aa9.03□□□□□ -0.96
C12orf49-201ENST00000261318 DSPP15924 2871 aaKnown RBP9.03□□□□□ -0.96
C12orf49-201ENST00000261318 COL6A5A8TX70 2615 aa9.02□□□□□ -0.97
C12orf49-201ENST00000261318 KRTAP26-1Q6PEX3 210 aa9□□□□□ -0.97
C12orf49-201ENST00000261318 DNAH14Q0VDD8 3507 aa8.97□□□□□ -0.97
C12orf49-201ENST00000261318 KALRNO60229 2985 aa8.96□□□□□ -0.97
C12orf49-201ENST00000261318 ZNF292O60281 2723 aa8.96□□□□□ -0.98
C12orf49-201ENST00000261318 TEP1Q99973 2627 aaKnown RBP8.96□□□□□ -0.98
C12orf49-201ENST00000261318 Q6ZR54 194 aa8.95□□□□□ -0.98
C12orf49-201ENST00000261318 A0A0A0MQY5 61 aa8.94□□□□□ -0.98
C12orf49-201ENST00000261318 ROMO1P60602 79 aa8.94□□□□□ -0.98
C12orf49-201ENST00000261318 RPL37P61927 97 aaKnown RBP8.92□□□□□ -0.98
C12orf49-201ENST00000261318 SETXQ7Z333 2677 aaKnown RBP8.91□□□□□ -0.98
C12orf49-201ENST00000261318 UNC80Q8N2C7 3258 aa8.91□□□□□ -0.98
C12orf49-201ENST00000261318 CDH23Q9H251 3354 aa8.9□□□□□ -0.98
C12orf49-201ENST00000261318 ASB16-AS1Q495Z4 193 aa8.9□□□□□ -0.98
C12orf49-201ENST00000261318 R4GN34 69 aa8.9□□□□□ -0.98
C12orf49-201ENST00000261318 KRTAP1-5Q9BYS1 174 aa8.89□□□□□ -0.99
C12orf49-201ENST00000261318 H1FX-AS1Q4G0G2 97 aa8.88□□□□□ -0.99
C12orf49-201ENST00000261318 KRTAP4-16G5E9R7 235 aaPredicted RBP8.88□□□□□ -0.99
C12orf49-201ENST00000261318 STAB2Q8WWQ8 2551 aa8.87□□□□□ -0.99
C12orf49-201ENST00000261318 KRTAP29-1A8MX34 341 aaPredicted RBP8.86□□□□□ -0.99
C12orf49-201ENST00000261318 APCP25054 2843 aa8.85□□□□□ -0.99
C12orf49-201ENST00000261318 LAMA1P25391 3075 aa8.85□□□□□ -0.99
C12orf49-201ENST00000261318 M0R2T5 61 aa8.85□□□□□ -0.99
C12orf49-201ENST00000261318 ITPR2Q14571 2701 aa8.85□□□□□ -0.99
C12orf49-201ENST00000261318 KMT2BQ9UMN6 2715 aaPredicted RBP8.84□□□□□ -0.99
C12orf49-201ENST00000261318 REV3LO60673 3130 aa8.83□□□□□ -1
C12orf49-201ENST00000261318 NBEAQ8NFP9 2946 aa8.79□□□□□ -1
C12orf49-201ENST00000261318 ITPR1Q14643 2758 aa8.78□□□□□ -1
C12orf49-201ENST00000261318 LRBAP50851 2863 aa8.78□□□□□ -1
C12orf49-201ENST00000261318 VCANP13611 3396 aa8.77□□□□□ -1.01
C12orf49-201ENST00000261318 SPATA8Q6RVD6 105 aa8.74□□□□□ -1.01
C12orf49-201ENST00000261318 UBR5O95071 2799 aaPredicted RBP8.72□□□□□ -1.01
C12orf49-201ENST00000261318 M0QZ58 72 aa8.72□□□□□ -1.01
C12orf49-201ENST00000261318 SEC61BP60468 96 aaKnown RBP8.7□□□□□ -1.02
C12orf49-201ENST00000261318 KRTAP10-1P60331 282 aa8.69□□□□□ -1.02
C12orf49-201ENST00000261318 BAHCC1Q9P281 2608 aa8.69□□□□□ -1.02
C12orf49-201ENST00000261318 ASH1LQ9NR48 2969 aaKnown RBP8.69□□□□□ -1.02
C12orf49-201ENST00000261318 A6NN06 94 aa8.68□□□□□ -1.02
C12orf49-201ENST00000261318 PANO1I0J062 215 aa8.67□□□□□ -1.02
C12orf49-201ENST00000261318 KRTAP10-2P60368 255 aa8.67□□□□□ -1.02
C12orf49-201ENST00000261318 ADM2Q7Z4H4 148 aa8.67□□□□□ -1.02
C12orf49-201ENST00000261318 UTP20O75691 2785 aaKnown RBP8.66□□□□□ -1.02
C12orf49-201ENST00000261318 LCE6AA0A183 80 aa8.66□□□□□ -1.02
C12orf49-201ENST00000261318 DMXL2Q8TDJ6 3036 aa8.66□□□□□ -1.02
C12orf49-201ENST00000261318 FRYLO94915 3013 aa8.66□□□□□ -1.02
C12orf49-201ENST00000261318 IGSF10Q6WRI0 2623 aa8.65□□□□□ -1.02
C12orf49-201ENST00000261318 A0A087X002 238 aa8.65□□□□□ -1.02
C12orf49-201ENST00000261318 NOTCH2NLQ7Z3S9 236 aa8.65□□□□□ -1.02
C12orf49-201ENST00000261318 NSD1Q96L73 2696 aaPredicted RBP8.64□□□□□ -1.03
C12orf49-201ENST00000261318 Q5VSD8 79 aa8.63□□□□□ -1.03
C12orf49-201ENST00000261318 COL6A3P12111 3177 aa8.62□□□□□ -1.03
C12orf49-201ENST00000261318 BOD1L1Q8NFC6 3051 aa8.62□□□□□ -1.03
C12orf49-201ENST00000261318 TACC2O95359 2948 aa8.61□□□□□ -1.03
C12orf49-201ENST00000261318 KRTAP25-1Q3LHN0 102 aa8.6□□□□□ -1.03
C12orf49-201ENST00000261318 ADGRG4Q8IZF6 3080 aa8.6□□□□□ -1.03
C12orf49-201ENST00000261318 KRTAP16-1A8MUX0 517 aa8.56□□□□□ -1.04
C12orf49-201ENST00000261318 SZT2Q5T011 3432 aa8.56□□□□□ -1.04
C12orf49-201ENST00000261318 KRTAP11-1Q8IUC1 163 aa8.54□□□□□ -1.04
C12orf49-201ENST00000261318 A8MU10 97 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms