RNA–Protein interactions for RNA: ENST00000261226.8

TMCC3-201, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC3, Length 5,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-201ENST00000261226 CDH23Q9H251 3354 aa8.88□□□□□ -0.99
TMCC3-201ENST00000261226 CELSR3Q9NYQ7 3312 aa8.88□□□□□ -0.99
TMCC3-201ENST00000261226 RBM12B-AS1Q9P1G2 102 aa8.88□□□□□ -0.99
TMCC3-201ENST00000261226 LINC00304Q8N9R0 145 aa8.87□□□□□ -0.99
TMCC3-201ENST00000261226 NBEAQ8NFP9 2946 aa8.86□□□□□ -0.99
TMCC3-201ENST00000261226 MMP24-AS1A0A0U1RRL7 71 aa8.84□□□□□ -0.99
TMCC3-201ENST00000261226 SPRR1AP35321 89 aa8.83□□□□□ -1
TMCC3-201ENST00000261226 CRIPTQ9P021 101 aa8.83□□□□□ -1
TMCC3-201ENST00000261226 UNC79Q9P2D8 2635 aa8.83□□□□□ -1
TMCC3-201ENST00000261226 Q5VV11 94 aa8.83□□□□□ -1
TMCC3-201ENST00000261226 ZNF292O60281 2723 aa8.83□□□□□ -1
TMCC3-201ENST00000261226 HRES1P13985 223 aa8.81□□□□□ -1
TMCC3-201ENST00000261226 LINC01558Q9Y6Z2 57 aa8.81□□□□□ -1
TMCC3-201ENST00000261226 HELZ2Q9BYK8 2649 aaKnown RBP8.81□□□□□ -1
TMCC3-201ENST00000261226 DNAH14Q0VDD8 3507 aa8.81□□□□□ -1
TMCC3-201ENST00000261226 NBEAL2Q6ZNJ1 2754 aa8.8□□□□□ -1
TMCC3-201ENST00000261226 VCANP13611 3396 aa8.78□□□□□ -1
TMCC3-201ENST00000261226 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.78□□□□□ -1
TMCC3-201ENST00000261226 WWC2-AS2Q96NR7 200 aa8.77□□□□□ -1
TMCC3-201ENST00000261226 A0A0D9SG42 100 aa8.77□□□□□ -1.01
TMCC3-201ENST00000261226 PRAC1Q96KF2 57 aa8.75□□□□□ -1.01
TMCC3-201ENST00000261226 SMR3BP02814 79 aaPredicted RBP8.75□□□□□ -1.01
TMCC3-201ENST00000261226 LAMA1P25391 3075 aa8.75□□□□□ -1.01
TMCC3-201ENST00000261226 LINC00472Q9H8W2 130 aa8.75□□□□□ -1.01
TMCC3-201ENST00000261226 KALRNO60229 2985 aa8.74□□□□□ -1.01
TMCC3-201ENST00000261226 TEX15Q9BXT5 2789 aa8.73□□□□□ -1.01
TMCC3-201ENST00000261226 SPINK7P58062 85 aa8.72□□□□□ -1.01
TMCC3-201ENST00000261226 NBEAL1Q6ZS30 2694 aa8.71□□□□□ -1.01
TMCC3-201ENST00000261226 NOTCH1P46531 2555 aa8.71□□□□□ -1.01
TMCC3-201ENST00000261226 KRTAP26-1Q6PEX3 210 aa8.7□□□□□ -1.02
TMCC3-201ENST00000261226 LINC01554Q52M75 96 aa8.69□□□□□ -1.02
TMCC3-201ENST00000261226 SPRR1BP22528 89 aa8.67□□□□□ -1.02
TMCC3-201ENST00000261226 TNP2Q05952 138 aa8.66□□□□□ -1.02
TMCC3-201ENST00000261226 A0A1B0GU33 70 aa8.66□□□□□ -1.02
TMCC3-201ENST00000261226 SZT2Q5T011 3432 aa8.63□□□□□ -1.03
TMCC3-201ENST00000261226 Q5W150 140 aa8.62□□□□□ -1.03
TMCC3-201ENST00000261226 TEP1Q99973 2627 aaKnown RBP8.6□□□□□ -1.03
TMCC3-201ENST00000261226 STAB1Q9NY15 2570 aa8.59□□□□□ -1.03
TMCC3-201ENST00000261226 COL6A5A8TX70 2615 aa8.59□□□□□ -1.03
TMCC3-201ENST00000261226 KRTAP1-5Q9BYS1 174 aa8.59□□□□□ -1.04
TMCC3-201ENST00000261226 CSAG1Q6PB30 78 aa8.58□□□□□ -1.04
TMCC3-201ENST00000261226 KRTAP4-16G5E9R7 235 aaPredicted RBP8.57□□□□□ -1.04
TMCC3-201ENST00000261226 SETXQ7Z333 2677 aaKnown RBP8.57□□□□□ -1.04
TMCC3-201ENST00000261226 ADGRG4Q8IZF6 3080 aa8.57□□□□□ -1.04
TMCC3-201ENST00000261226 FRYLO94915 3013 aa8.57□□□□□ -1.04
TMCC3-201ENST00000261226 PLAC8Q9NZF1 115 aa8.56□□□□□ -1.04
TMCC3-201ENST00000261226 UBR5O95071 2799 aaPredicted RBP8.56□□□□□ -1.04
TMCC3-201ENST00000261226 ZCCHC13Q8WW36 166 aaKnown RBP8.55□□□□□ -1.04
TMCC3-201ENST00000261226 BOD1L1Q8NFC6 3051 aa8.55□□□□□ -1.04
TMCC3-201ENST00000261226 KRTAP29-1A8MX34 341 aaPredicted RBP8.54□□□□□ -1.04
TMCC3-201ENST00000261226 H3BS24 57 aa8.54□□□□□ -1.04
TMCC3-201ENST00000261226 DMXL2Q8TDJ6 3036 aa8.52□□□□□ -1.05
TMCC3-201ENST00000261226 ATMQ13315 3056 aa8.51□□□□□ -1.05
TMCC3-201ENST00000261226 COX6B2Q6YFQ2 88 aa8.51□□□□□ -1.05
TMCC3-201ENST00000261226 LRBAP50851 2863 aa8.49□□□□□ -1.05
TMCC3-201ENST00000261226 ASH1LQ9NR48 2969 aaKnown RBP8.49□□□□□ -1.05
TMCC3-201ENST00000261226 Q6ZR54 194 aa8.47□□□□□ -1.05
TMCC3-201ENST00000261226 ITPR1Q14643 2758 aa8.47□□□□□ -1.05
TMCC3-201ENST00000261226 IGSF10Q6WRI0 2623 aa8.46□□□□□ -1.05
TMCC3-201ENST00000261226 BAHCC1Q9P281 2608 aa8.46□□□□□ -1.05
TMCC3-201ENST00000261226 DMAC1Q96GE9 116 aa8.46□□□□□ -1.06
TMCC3-201ENST00000261226 TACC2O95359 2948 aa8.45□□□□□ -1.06
TMCC3-201ENST00000261226 COL6A3P12111 3177 aa8.45□□□□□ -1.06
TMCC3-201ENST00000261226 SPEGQ15772 3267 aa8.43□□□□□ -1.06
TMCC3-201ENST00000261226 J3QL48 77 aa8.42□□□□□ -1.06
TMCC3-201ENST00000261226 PANO1I0J062 215 aa8.41□□□□□ -1.06
TMCC3-201ENST00000261226 LINC00483Q53H64 154 aa8.4□□□□□ -1.06
TMCC3-201ENST00000261226 COL12A1Q99715 3063 aa8.39□□□□□ -1.07
TMCC3-201ENST00000261226 FLNCQ14315 2725 aa8.39□□□□□ -1.07
TMCC3-201ENST00000261226 LUZP6Q538Z0 58 aa8.38□□□□□ -1.07
TMCC3-201ENST00000261226 LCE6AA0A183 80 aa8.37□□□□□ -1.07
TMCC3-201ENST00000261226 A0A087X002 238 aa8.37□□□□□ -1.07
TMCC3-201ENST00000261226 NOTCH2NLQ7Z3S9 236 aa8.37□□□□□ -1.07
TMCC3-201ENST00000261226 STAB2Q8WWQ8 2551 aa8.36□□□□□ -1.07
TMCC3-201ENST00000261226 CFAP47Q6ZTR5 3102 aa8.36□□□□□ -1.07
TMCC3-201ENST00000261226 FLG2Q5D862 2391 aaPredicted RBP8.35□□□□□ -1.07
TMCC3-201ENST00000261226 DMBT1Q9UGM3 2413 aaPredicted RBP8.35□□□□□ -1.07
TMCC3-201ENST00000261226 REV3LO60673 3130 aa8.34□□□□□ -1.07
TMCC3-201ENST00000261226 Q6ZSA8 131 aa8.34□□□□□ -1.08
TMCC3-201ENST00000261226 NSD1Q96L73 2696 aaPredicted RBP8.33□□□□□ -1.08
TMCC3-201ENST00000261226 A8MU10 97 aa8.33□□□□□ -1.08
TMCC3-201ENST00000261226 KRTAP11-1Q8IUC1 163 aa8.32□□□□□ -1.08
TMCC3-201ENST00000261226 KRTAP7-1Q8IUC3 87 aa8.32□□□□□ -1.08
TMCC3-201ENST00000261226 A6NN06 94 aa8.32□□□□□ -1.08
TMCC3-201ENST00000261226 S4R3F8 94 aa8.31□□□□□ -1.08
TMCC3-201ENST00000261226 UTP20O75691 2785 aaKnown RBP8.29□□□□□ -1.08
TMCC3-201ENST00000261226 ZZEF1O43149 2961 aa8.29□□□□□ -1.08
TMCC3-201ENST00000261226 APCP25054 2843 aa8.29□□□□□ -1.08
TMCC3-201ENST00000261226 CAMK2N1Q7Z7J9 78 aa8.28□□□□□ -1.08
TMCC3-201ENST00000261226 H1FX-AS1Q4G0G2 97 aa8.28□□□□□ -1.08
TMCC3-201ENST00000261226 RPL37P61927 97 aaKnown RBP8.27□□□□□ -1.09
TMCC3-201ENST00000261226 SPATA8Q6RVD6 105 aa8.27□□□□□ -1.09
TMCC3-201ENST00000261226 ASB16-AS1Q495Z4 193 aa8.26□□□□□ -1.09
TMCC3-201ENST00000261226 ROMO1P60602 79 aa8.26□□□□□ -1.09
TMCC3-201ENST00000261226 KRTAP10-2P60368 255 aa8.25□□□□□ -1.09
TMCC3-201ENST00000261226 KRTAP10-1P60331 282 aa8.24□□□□□ -1.09
TMCC3-201ENST00000261226 HIVEP1P15822 2718 aa8.24□□□□□ -1.09
TMCC3-201ENST00000261226 ITPR2Q14571 2701 aa8.22□□□□□ -1.09
TMCC3-201ENST00000261226 ADM2Q7Z4H4 148 aa8.2□□□□□ -1.1
TMCC3-201ENST00000261226 CELSR2Q9HCU4 2923 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms