RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 A0A1W2PNM2 257 aa2.47□□□□□ -2.01
RNF38-201ENST00000259605 KRTAP10-2P60368 255 aa2.47□□□□□ -2.01
RNF38-201ENST00000259605 C20orf166-AS1Q96NR2 134 aa2.46□□□□□ -2.02
RNF38-201ENST00000259605 H1FX-AS1Q4G0G2 97 aa2.46□□□□□ -2.02
RNF38-201ENST00000259605 CEP350Q5VT06 3117 aa2.45□□□□□ -2.02
RNF38-201ENST00000259605 USP34Q70CQ2 3546 aa2.45□□□□□ -2.02
RNF38-201ENST00000259605 TEP1Q99973 2627 aaKnown RBP2.45□□□□□ -2.02
RNF38-201ENST00000259605 SPANXA2-OT1Q8N9U9 137 aa2.45□□□□□ -2.02
RNF38-201ENST00000259605 UNC79Q9P2D8 2635 aa2.44□□□□□ -2.02
RNF38-201ENST00000259605 CFAP46Q8IYW2 2715 aa2.44□□□□□ -2.02
RNF38-201ENST00000259605 SPRR1BP22528 89 aa2.43□□□□□ -2.02
RNF38-201ENST00000259605 KMT2BQ9UMN6 2715 aaPredicted RBP2.43□□□□□ -2.02
RNF38-201ENST00000259605 PRO2289Q9P1D8 64 aa2.43□□□□□ -2.02
RNF38-201ENST00000259605 TNRC18O15417 2968 aaPredicted RBP2.43□□□□□ -2.02
RNF38-201ENST00000259605 ITPR3Q14573 2671 aa2.42□□□□□ -2.02
RNF38-201ENST00000259605 FLNAP21333 2647 aaKnown RBP2.42□□□□□ -2.02
RNF38-201ENST00000259605 PCSK5Q92824 1860 aa2.41□□□□□ -2.02
RNF38-201ENST00000259605 Q5W150 140 aa2.4□□□□□ -2.02
RNF38-201ENST00000259605 A6NN06 94 aa2.4□□□□□ -2.03
RNF38-201ENST00000259605 ASB16-AS1Q495Z4 193 aa2.4□□□□□ -2.03
RNF38-201ENST00000259605 COL6A5A8TX70 2615 aa2.39□□□□□ -2.03
RNF38-201ENST00000259605 GOLGB1Q14789 3259 aaKnown RBP2.39□□□□□ -2.03
RNF38-201ENST00000259605 RPL37P61927 97 aaKnown RBP2.39□□□□□ -2.03
RNF38-201ENST00000259605 Q75L30 129 aa2.39□□□□□ -2.03
RNF38-201ENST00000259605 A0A0G2JQZ4 141 aa2.38□□□□□ -2.03
RNF38-201ENST00000259605 ADM2Q7Z4H4 148 aa2.38□□□□□ -2.03
RNF38-201ENST00000259605 SPRR1AP35321 89 aa2.38□□□□□ -2.03
RNF38-201ENST00000259605 STAB2Q8WWQ8 2551 aa2.38□□□□□ -2.03
RNF38-201ENST00000259605 IGSF10Q6WRI0 2623 aa2.38□□□□□ -2.03
RNF38-201ENST00000259605 PANO1I0J062 215 aa2.37□□□□□ -2.03
RNF38-201ENST00000259605 Q5VV11 94 aa2.37□□□□□ -2.03
RNF38-201ENST00000259605 KRTAP1-5Q9BYS1 174 aa2.37□□□□□ -2.03
RNF38-201ENST00000259605 SRCAPQ6ZRS2 3230 aa2.36□□□□□ -2.03
RNF38-201ENST00000259605 A0A087X002 238 aa2.35□□□□□ -2.03
RNF38-201ENST00000259605 A8MUU9 505 aa2.35□□□□□ -2.03
RNF38-201ENST00000259605 TNP1P09430 55 aa2.35□□□□□ -2.03
RNF38-201ENST00000259605 KRTAP29-1A8MX34 341 aaPredicted RBP2.35□□□□□ -2.03
RNF38-201ENST00000259605 GCN1Q92616 2671 aaKnown RBP2.34□□□□□ -2.03
RNF38-201ENST00000259605 MMP24-AS1A0A0U1RRL7 71 aa2.34□□□□□ -2.03
RNF38-201ENST00000259605 CHD6Q8TD26 2715 aa2.34□□□□□ -2.04
RNF38-201ENST00000259605 KRTAP10-10P60014 251 aa2.33□□□□□ -2.04
RNF38-201ENST00000259605 Q8N9P0 234 aaPredicted RBP2.33□□□□□ -2.04
RNF38-201ENST00000259605 NBEAL1Q6ZS30 2694 aa2.33□□□□□ -2.04
RNF38-201ENST00000259605 TPRXLQ17RH7 258 aa2.33□□□□□ -2.04
RNF38-201ENST00000259605 LCE2BO14633 110 aa2.32□□□□□ -2.04
RNF38-201ENST00000259605 NOTCH2NLQ7Z3S9 236 aa2.32□□□□□ -2.04
RNF38-201ENST00000259605 OCR1Q9BZK8 76 aa2.32□□□□□ -2.04
RNF38-201ENST00000259605 PRAC1Q96KF2 57 aa2.32□□□□□ -2.04
RNF38-201ENST00000259605 KRTAP16-1A8MUX0 517 aa2.31□□□□□ -2.04
RNF38-201ENST00000259605 LCE2CQ5TA81 110 aa2.31□□□□□ -2.04
RNF38-201ENST00000259605 LINC00472Q9H8W2 130 aa2.31□□□□□ -2.04
RNF38-201ENST00000259605 TEX15Q9BXT5 2789 aa2.31□□□□□ -2.04
RNF38-201ENST00000259605 CR1P17927 2039 aa2.31□□□□□ -2.04
RNF38-201ENST00000259605 KRTAP10-8P60410 259 aa2.31□□□□□ -2.04
RNF38-201ENST00000259605 P0C880 135 aa2.3□□□□□ -2.04
RNF38-201ENST00000259605 ROMO1P60602 79 aa2.3□□□□□ -2.04
RNF38-201ENST00000259605 Q6ZRN7 208 aaPredicted RBP2.3□□□□□ -2.04
RNF38-201ENST00000259605 Q8NDZ9 215 aa2.3□□□□□ -2.04
RNF38-201ENST00000259605 LINC01558Q9Y6Z2 57 aa2.29□□□□□ -2.04
RNF38-201ENST00000259605 MAP1AP78559 2803 aaPredicted RBP2.28□□□□□ -2.04
RNF38-201ENST00000259605 A8MU10 97 aa2.27□□□□□ -2.05
RNF38-201ENST00000259605 LCE2AQ5TA79 106 aaPredicted RBP2.27□□□□□ -2.05
RNF38-201ENST00000259605 ASH1LQ9NR48 2969 aaKnown RBP2.27□□□□□ -2.05
RNF38-201ENST00000259605 KRTAP26-1Q6PEX3 210 aa2.26□□□□□ -2.05
RNF38-201ENST00000259605 NSD1Q96L73 2696 aaPredicted RBP2.26□□□□□ -2.05
RNF38-201ENST00000259605 ZNF292O60281 2723 aa2.26□□□□□ -2.05
RNF38-201ENST00000259605 SPATA8Q6RVD6 105 aa2.26□□□□□ -2.05
RNF38-201ENST00000259605 PP632Q6XCG6 107 aa2.24□□□□□ -2.05
RNF38-201ENST00000259605 KRTAP4-8Q9BYQ9 185 aa2.24□□□□□ -2.05
RNF38-201ENST00000259605 BPTFQ12830 3046 aa2.22□□□□□ -2.05
RNF38-201ENST00000259605 XP32Q5T750 250 aa2.22□□□□□ -2.05
RNF38-201ENST00000259605 A0A1B0GVY2 172 aa2.22□□□□□ -2.05
RNF38-201ENST00000259605 TENM4Q6N022 2769 aa2.22□□□□□ -2.05
RNF38-201ENST00000259605 WDR87Q6ZQQ6 2873 aa2.22□□□□□ -2.05
RNF38-201ENST00000259605 KRTAP13-2Q52LG2 175 aa2.21□□□□□ -2.06
RNF38-201ENST00000259605 FLNCQ14315 2725 aa2.2□□□□□ -2.06
RNF38-201ENST00000259605 FBN3Q75N90 2809 aa2.2□□□□□ -2.06
RNF38-201ENST00000259605 KRTAP25-1Q3LHN0 102 aa2.18□□□□□ -2.06
RNF38-201ENST00000259605 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
RNF38-201ENST00000259605 PCNTO95613 3336 aa2.18□□□□□ -2.06
RNF38-201ENST00000259605 KRTAP4-16G5E9R7 235 aaPredicted RBP2.18□□□□□ -2.06
RNF38-201ENST00000259605 CENPEQ02224 2701 aa2.17□□□□□ -2.06
RNF38-201ENST00000259605 AKAP13Q12802 2813 aa2.16□□□□□ -2.06
RNF38-201ENST00000259605 ITPR2Q14571 2701 aa2.16□□□□□ -2.06
RNF38-201ENST00000259605 KRTAP13-1Q8IUC0 172 aa2.15□□□□□ -2.07
RNF38-201ENST00000259605 NDUFAF8A1L188 74 aa2.15□□□□□ -2.07
RNF38-201ENST00000259605 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.15□□□□□ -2.07
RNF38-201ENST00000259605 KRTAP13-3Q3SY46 172 aa2.15□□□□□ -2.07
RNF38-201ENST00000259605 LORP23490 312 aaPredicted RBP2.14□□□□□ -2.07
RNF38-201ENST00000259605 KRTAP4-5Q9BYR2 181 aa2.13□□□□□ -2.07
RNF38-201ENST00000259605 C10orf95Q9H7T3 257 aa2.12□□□□□ -2.07
RNF38-201ENST00000259605 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
RNF38-201ENST00000259605 KRTAP9-8Q9BYQ0 159 aa2.12□□□□□ -2.07
RNF38-201ENST00000259605 UTP20O75691 2785 aaKnown RBP2.12□□□□□ -2.07
RNF38-201ENST00000259605 UTRNP46939 3433 aa2.11□□□□□ -2.07
RNF38-201ENST00000259605 TRANK1O15050 2925 aa2.11□□□□□ -2.07
RNF38-201ENST00000259605 KRTAP1-4P0C5Y4 121 aa2.11□□□□□ -2.07
RNF38-201ENST00000259605 CENPFP49454 3210 aa2.1□□□□□ -2.07
RNF38-201ENST00000259605 CHD9Q3L8U1 2897 aa2.1□□□□□ -2.07
RNF38-201ENST00000259605 UBR5O95071 2799 aaPredicted RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms