RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 HSBP1L1C9JCN9 74 aa10.16□□□□□ -0.78
TM6SF1-201ENST00000258909 RPL37P61927 97 aaKnown RBP10.16□□□□□ -0.78
TM6SF1-201ENST00000258909 hADV29S1A0JD25 119 aa10.15□□□□□ -0.78
TM6SF1-201ENST00000258909 C12orf57Q99622 126 aa10.13□□□□□ -0.79
TM6SF1-201ENST00000258909 IGFL1Q6UW32 110 aa10.1□□□□□ -0.79
TM6SF1-201ENST00000258909 CLEC2BQ92478 149 aa10.09□□□□□ -0.79
TM6SF1-201ENST00000258909 TRBV7-7A0A0K0K1E9 115 aa10.08□□□□□ -0.8
TM6SF1-201ENST00000258909 OCIAD2Q56VL3 154 aa10.08□□□□□ -0.8
TM6SF1-201ENST00000258909 Q6JHZ5 121 aa10.08□□□□□ -0.8
TM6SF1-201ENST00000258909 HIST1H4GQ99525 98 aa10.07□□□□□ -0.8
TM6SF1-201ENST00000258909 SCGB1D1O95968 90 aa10.05□□□□□ -0.8
TM6SF1-201ENST00000258909 S100A6P06703 90 aa10.05□□□□□ -0.8
TM6SF1-201ENST00000258909 CFC1BP0CG36 223 aa10.05□□□□□ -0.8
TM6SF1-201ENST00000258909 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.05□□□□□ -0.8
TM6SF1-201ENST00000258909 CRCT1Q9UGL9 99 aa10.04□□□□□ -0.8
TM6SF1-201ENST00000258909 COX6B2Q6YFQ2 88 aa10.04□□□□□ -0.8
TM6SF1-201ENST00000258909 H3BUT2 72 aa10.03□□□□□ -0.8
TM6SF1-201ENST00000258909 BVES-AS1Q5T3Y7 98 aa10.03□□□□□ -0.8
TM6SF1-201ENST00000258909 SNHG12Q9BXW3 62 aa10.03□□□□□ -0.8
TM6SF1-201ENST00000258909 M0R2T5 61 aa10.02□□□□□ -0.81
TM6SF1-201ENST00000258909 LORP23490 312 aaPredicted RBP10.02□□□□□ -0.81
TM6SF1-201ENST00000258909 KRTAP10-6P60371 365 aaPredicted RBP10.02□□□□□ -0.81
TM6SF1-201ENST00000258909 FLGP20930 4061 aaPredicted RBP10.01□□□□□ -0.81
TM6SF1-201ENST00000258909 OBSCN-AS1Q96MR7 158 aa10.01□□□□□ -0.81
TM6SF1-201ENST00000258909 COX8AP10176 69 aa10□□□□□ -0.81
TM6SF1-201ENST00000258909 PPDPFLQ8WWR9 84 aa9.98□□□□□ -0.81
TM6SF1-201ENST00000258909 CFC1P0CG37 223 aa9.97□□□□□ -0.81
TM6SF1-201ENST00000258909 C14orf144Q96I85 54 aa9.96□□□□□ -0.82
TM6SF1-201ENST00000258909 LST1O00453 97 aa9.95□□□□□ -0.82
TM6SF1-201ENST00000258909 S100A1P23297 94 aa9.95□□□□□ -0.82
TM6SF1-201ENST00000258909 RAB37Q96AX2 223 aa9.94□□□□□ -0.82
TM6SF1-201ENST00000258909 DLEU1O43261 78 aa9.93□□□□□ -0.82
TM6SF1-201ENST00000258909 ATP11AUNQ6ZP68 121 aa9.93□□□□□ -0.82
TM6SF1-201ENST00000258909 Q75L30 129 aa9.92□□□□□ -0.82
TM6SF1-201ENST00000258909 FAM218AQ96MZ4 157 aa9.92□□□□□ -0.82
TM6SF1-201ENST00000258909 Q6Q795 121 aa9.91□□□□□ -0.82
TM6SF1-201ENST00000258909 Q96NJ1 140 aa9.91□□□□□ -0.82
TM6SF1-201ENST00000258909 PAM16Q9Y3D7 125 aa9.91□□□□□ -0.82
TM6SF1-201ENST00000258909 NDUFV3P56181 108 aaKnown RBP9.89□□□□□ -0.83
TM6SF1-201ENST00000258909 H0YGX0 51 aa9.88□□□□□ -0.83
TM6SF1-201ENST00000258909 SPATA45Q537H7 98 aa9.88□□□□□ -0.83
TM6SF1-201ENST00000258909 A0A0B4J2C4 111 aa9.87□□□□□ -0.83
TM6SF1-201ENST00000258909 SNCGO76070 127 aa9.87□□□□□ -0.83
TM6SF1-201ENST00000258909 HIGD1BQ9P298 99 aa9.87□□□□□ -0.83
TM6SF1-201ENST00000258909 C2orf91Q6ZV80 131 aa9.86□□□□□ -0.83
TM6SF1-201ENST00000258909 SS18L2Q9UHA2 77 aa9.86□□□□□ -0.83
TM6SF1-201ENST00000258909 TEN1Q86WV5 123 aa9.85□□□□□ -0.83
TM6SF1-201ENST00000258909 A0A087WSZ3 146 aa9.85□□□□□ -0.83
TM6SF1-201ENST00000258909 H3BMG7 143 aa9.82□□□□□ -0.84
TM6SF1-201ENST00000258909 FABP2P12104 132 aa9.82□□□□□ -0.84
TM6SF1-201ENST00000258909 VAMP8Q9BV40 100 aa9.82□□□□□ -0.84
TM6SF1-201ENST00000258909 CEND1Q8N111 149 aa9.81□□□□□ -0.84
TM6SF1-201ENST00000258909 C20orf166-AS1Q96NR2 134 aa9.8□□□□□ -0.84
TM6SF1-201ENST00000258909 PRO1854Q9UHT4 67 aa9.8□□□□□ -0.84
TM6SF1-201ENST00000258909 A8MUU9 505 aa9.78□□□□□ -0.84
TM6SF1-201ENST00000258909 FXYD2P54710 66 aa9.78□□□□□ -0.84
TM6SF1-201ENST00000258909 DSCR10P59022 87 aa9.78□□□□□ -0.84
TM6SF1-201ENST00000258909 A0A1B0GX51 115 aa9.76□□□□□ -0.85
TM6SF1-201ENST00000258909 A0A1W2PNM2 257 aa9.76□□□□□ -0.85
TM6SF1-201ENST00000258909 TRIAP1O43715 76 aa9.76□□□□□ -0.85
TM6SF1-201ENST00000258909 A0A1B0GV72 72 aa9.75□□□□□ -0.85
TM6SF1-201ENST00000258909 TMEM238LA0A1B0GVL6 79 aa9.74□□□□□ -0.85
TM6SF1-201ENST00000258909 A6NJY4 79 aa9.74□□□□□ -0.85
TM6SF1-201ENST00000258909 GHRHP01286 108 aa9.73□□□□□ -0.85
TM6SF1-201ENST00000258909 SIGMAR1Q99720 223 aa9.73□□□□□ -0.85
TM6SF1-201ENST00000258909 ANKRD29Q8N6D5 301 aa9.69□□□□□ -0.86
TM6SF1-201ENST00000258909 K7ERJ3 54 aa9.68□□□□□ -0.86
TM6SF1-201ENST00000258909 TRBV20-1A0A075B6N2 111 aa9.67□□□□□ -0.86
TM6SF1-201ENST00000258909 DNAL4O96015 105 aa9.67□□□□□ -0.86
TM6SF1-201ENST00000258909 IGKV4-1P06312 121 aa9.67□□□□□ -0.86
TM6SF1-201ENST00000258909 ORMDL1Q9P0S3 153 aa9.67□□□□□ -0.86
TM6SF1-201ENST00000258909 KRTAP16-1A8MUX0 517 aa9.66□□□□□ -0.86
TM6SF1-201ENST00000258909 PSMB2P49721 201 aa9.66□□□□□ -0.86
TM6SF1-201ENST00000258909 LINC00313P59037 77 aa9.66□□□□□ -0.86
TM6SF1-201ENST00000258909 DEFB116Q30KQ4 102 aa9.66□□□□□ -0.86
TM6SF1-201ENST00000258909 TRBV7-4A0A0J9YYF1 115 aa9.65□□□□□ -0.87
TM6SF1-201ENST00000258909 NOTCH2NLQ7Z3S9 236 aa9.64□□□□□ -0.87
TM6SF1-201ENST00000258909 HSD52Q0P140 79 aa9.63□□□□□ -0.87
TM6SF1-201ENST00000258909 KRTAP9-8Q9BYQ0 159 aa9.62□□□□□ -0.87
TM6SF1-201ENST00000258909 PYY3Q5JQD4 70 aa9.61□□□□□ -0.87
TM6SF1-201ENST00000258909 CCKP06307 115 aa9.6□□□□□ -0.87
TM6SF1-201ENST00000258909 TMEM256-PLSCR3K7ERE1 68 aa9.59□□□□□ -0.87
TM6SF1-201ENST00000258909 LINC00472Q9H8W2 130 aa9.59□□□□□ -0.87
TM6SF1-201ENST00000258909 USH2AO75445 5202 aa9.59□□□□□ -0.87
TM6SF1-201ENST00000258909 COX6CP09669 75 aa9.59□□□□□ -0.87
TM6SF1-201ENST00000258909 H3BQ85 93 aa9.58□□□□□ -0.88
TM6SF1-201ENST00000258909 TRACP01848 142 aa9.58□□□□□ -0.88
TM6SF1-201ENST00000258909 IGHV6-1A0A0B4J1U7 121 aa9.57□□□□□ -0.88
TM6SF1-201ENST00000258909 SSPOA2VEC9 5147 aa9.57□□□□□ -0.88
TM6SF1-201ENST00000258909 FAM236DA0A1B0GTK5 79 aa9.56□□□□□ -0.88
TM6SF1-201ENST00000258909 FAM236CP0DP71 79 aa9.56□□□□□ -0.88
TM6SF1-201ENST00000258909 VPS25Q9BRG1 176 aa9.54□□□□□ -0.88
TM6SF1-201ENST00000258909 UBE2V1Q13404 147 aa9.53□□□□□ -0.88
TM6SF1-201ENST00000258909 HRES1P13985 223 aa9.52□□□□□ -0.89
TM6SF1-201ENST00000258909 SCGB1C2P0DMR2 95 aa9.49□□□□□ -0.89
TM6SF1-201ENST00000258909 MPLKIPQ8TAP9 179 aa9.49□□□□□ -0.89
TM6SF1-201ENST00000258909 UQCR10Q9UDW1 63 aa9.49□□□□□ -0.89
TM6SF1-201ENST00000258909 RBM12B-AS1Q9P1G2 102 aa9.48□□□□□ -0.89
TM6SF1-201ENST00000258909 MT2AP02795 61 aa9.47□□□□□ -0.89
TM6SF1-201ENST00000258909 RBM3P98179 157 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms