RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ITPR2Q14571 2701 aa4.64□□□□□ -1.67
GPNMB-201ENST00000258733 SSBP3-AS1Q7Z2R9 100 aa4.64□□□□□ -1.67
GPNMB-201ENST00000258733 CSMD1Q96PZ7 3565 aa4.64□□□□□ -1.67
GPNMB-201ENST00000258733 LRBAP50851 2863 aa4.64□□□□□ -1.67
GPNMB-201ENST00000258733 IGLV8-61A0A075B6I0 122 aa4.63□□□□□ -1.67
GPNMB-201ENST00000258733 IGLV7-43P04211 117 aa4.63□□□□□ -1.67
GPNMB-201ENST00000258733 Q96NJ1 140 aa4.63□□□□□ -1.67
GPNMB-201ENST00000258733 CCL19Q99731 98 aa4.63□□□□□ -1.67
GPNMB-201ENST00000258733 TACC2O95359 2948 aa4.63□□□□□ -1.67
GPNMB-201ENST00000258733 F8P00451 2351 aa4.63□□□□□ -1.67
GPNMB-201ENST00000258733 FLNCQ14315 2725 aa4.63□□□□□ -1.67
GPNMB-201ENST00000258733 DCHS2Q6V1P9 2916 aa4.62□□□□□ -1.67
GPNMB-201ENST00000258733 FLG2Q5D862 2391 aaPredicted RBP4.62□□□□□ -1.67
GPNMB-201ENST00000258733 C6orf48Q9UBA6 75 aa4.62□□□□□ -1.67
GPNMB-201ENST00000258733 PDZD2O15018 2839 aa4.62□□□□□ -1.67
GPNMB-201ENST00000258733 POLQO75417 2590 aa4.62□□□□□ -1.67
GPNMB-201ENST00000258733 TP53AIP1Q9HCN2 124 aa4.62□□□□□ -1.67
GPNMB-201ENST00000258733 PANO1I0J062 215 aa4.61□□□□□ -1.67
GPNMB-201ENST00000258733 COL12A1Q99715 3063 aa4.61□□□□□ -1.67
GPNMB-201ENST00000258733 LRRK2Q5S007 2527 aa4.61□□□□□ -1.67
GPNMB-201ENST00000258733 SVEP1Q4LDE5 3571 aa4.6□□□□□ -1.67
GPNMB-201ENST00000258733 FAM168BA1KXE4 195 aa4.6□□□□□ -1.67
GPNMB-201ENST00000258733 TLN1Q9Y490 2541 aaKnown RBP4.6□□□□□ -1.67
GPNMB-201ENST00000258733 H3BUA1 57 aa4.6□□□□□ -1.67
GPNMB-201ENST00000258733 NBDYA0A0U1RRE5 68 aa4.59□□□□□ -1.67
GPNMB-201ENST00000258733 AKAP9Q99996 3911 aa4.59□□□□□ -1.67
GPNMB-201ENST00000258733 HIVEP1P15822 2718 aa4.59□□□□□ -1.68
GPNMB-201ENST00000258733 LYNX1G3V0Z9 82 aa4.59□□□□□ -1.68
GPNMB-201ENST00000258733 LYNX1P0DP58 116 aa4.59□□□□□ -1.68
GPNMB-201ENST00000258733 NOTCH2Q04721 2471 aa4.59□□□□□ -1.68
GPNMB-201ENST00000258733 SPG11Q96JI7 2443 aa4.58□□□□□ -1.68
GPNMB-201ENST00000258733 ALMS1Q8TCU4 4167 aa4.58□□□□□ -1.68
GPNMB-201ENST00000258733 UNQ6190/PRO20217Q6UXQ8 127 aa4.58□□□□□ -1.68
GPNMB-201ENST00000258733 KRTAP11-1Q8IUC1 163 aa4.58□□□□□ -1.68
GPNMB-201ENST00000258733 C5orf56Q8N8D9 126 aa4.58□□□□□ -1.68
GPNMB-201ENST00000258733 SETD2Q9BYW2 2564 aaPredicted RBP4.57□□□□□ -1.68
GPNMB-201ENST00000258733 C15orf56Q8N910 161 aa4.57□□□□□ -1.68
GPNMB-201ENST00000258733 ANGP03950 147 aaKnown RBP4.56□□□□□ -1.68
GPNMB-201ENST00000258733 CAMK2N1Q7Z7J9 78 aa4.56□□□□□ -1.68
GPNMB-201ENST00000258733 HRNRQ86YZ3 2850 aaPredicted RBP4.56□□□□□ -1.68
GPNMB-201ENST00000258733 MMP24-AS1A0A0U1RRL7 71 aa4.55□□□□□ -1.68
GPNMB-201ENST00000258733 CLPSL2Q6UWE3 100 aa4.55□□□□□ -1.68
GPNMB-201ENST00000258733 ANKHD1Q8IWZ3 2542 aaKnown RBP4.55□□□□□ -1.68
GPNMB-201ENST00000258733 NBASA2RRP1 2371 aa4.55□□□□□ -1.68
GPNMB-201ENST00000258733 HIVEP3Q5T1R4 2406 aa4.54□□□□□ -1.68
GPNMB-201ENST00000258733 USMG5Q96IX5 58 aa4.54□□□□□ -1.68
GPNMB-201ENST00000258733 FBN1P35555 2871 aaKnown RBP4.54□□□□□ -1.68
GPNMB-201ENST00000258733 VPS13CQ709C8 3753 aa4.54□□□□□ -1.68
GPNMB-201ENST00000258733 A0A1W2PPR1 153 aa4.52□□□□□ -1.69
GPNMB-201ENST00000258733 UTP20O75691 2785 aaKnown RBP4.52□□□□□ -1.69
GPNMB-201ENST00000258733 A0A1W2PNN7 141 aa4.51□□□□□ -1.69
GPNMB-201ENST00000258733 A0A1B0GUV1 79 aa4.51□□□□□ -1.69
GPNMB-201ENST00000258733 APCP25054 2843 aa4.51□□□□□ -1.69
GPNMB-201ENST00000258733 GVQW2A0A096LPI5 108 aaPredicted RBP4.51□□□□□ -1.69
GPNMB-201ENST00000258733 IGFL1Q6UW32 110 aa4.51□□□□□ -1.69
GPNMB-201ENST00000258733 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
GPNMB-201ENST00000258733 Q6ZRX8 168 aa4.5□□□□□ -1.69
GPNMB-201ENST00000258733 A0A0G2JQZ4 141 aa4.5□□□□□ -1.69
GPNMB-201ENST00000258733 FAM229AH3BQW9 127 aa4.49□□□□□ -1.69
GPNMB-201ENST00000258733 CELSR1Q9NYQ6 3014 aa4.48□□□□□ -1.69
GPNMB-201ENST00000258733 H0YAA0 97 aa4.47□□□□□ -1.69
GPNMB-201ENST00000258733 CELSR2Q9HCU4 2923 aa4.47□□□□□ -1.69
GPNMB-201ENST00000258733 DEFB131AP59861 70 aa4.46□□□□□ -1.7
GPNMB-201ENST00000258733 TPRXLQ17RH7 258 aa4.46□□□□□ -1.7
GPNMB-201ENST00000258733 LY6G6CO95867 125 aa4.45□□□□□ -1.7
GPNMB-201ENST00000258733 CSMD2Q7Z408 3487 aa4.43□□□□□ -1.7
GPNMB-201ENST00000258733 CRYBG3Q68DQ2 2970 aa4.43□□□□□ -1.7
GPNMB-201ENST00000258733 MAP1AP78559 2803 aaPredicted RBP4.43□□□□□ -1.7
GPNMB-201ENST00000258733 BRD3OSQ6XYD6 125 aa4.43□□□□□ -1.7
GPNMB-201ENST00000258733 KRTAP17-1Q9BYP8 105 aa4.43□□□□□ -1.7
GPNMB-201ENST00000258733 FN1P02751 2386 aaKnown RBP4.43□□□□□ -1.7
GPNMB-201ENST00000258733 MTORP42345 2549 aa4.42□□□□□ -1.7
GPNMB-201ENST00000258733 DEFB136Q30KP8 78 aa4.42□□□□□ -1.7
GPNMB-201ENST00000258733 NOP10Q9NPE3 64 aaKnown RBP4.42□□□□□ -1.7
GPNMB-201ENST00000258733 KRTAP10-9P60411 292 aa4.41□□□□□ -1.7
GPNMB-201ENST00000258733 Q6ZSA8 131 aa4.4□□□□□ -1.7
GPNMB-201ENST00000258733 CENPEQ02224 2701 aa4.4□□□□□ -1.7
GPNMB-201ENST00000258733 ANK2Q01484 3957 aa4.4□□□□□ -1.71
GPNMB-201ENST00000258733 H3BUX3 64 aa4.4□□□□□ -1.71
GPNMB-201ENST00000258733 NOTCH3Q9UM47 2321 aa4.4□□□□□ -1.71
GPNMB-201ENST00000258733 K7EIL1 84 aa4.39□□□□□ -1.71
GPNMB-201ENST00000258733 Q6YL49 198 aa4.39□□□□□ -1.71
GPNMB-201ENST00000258733 MRPL34Q9BQ48 92 aaKnown RBP4.38□□□□□ -1.71
GPNMB-201ENST00000258733 A0A1B0GU33 70 aa4.38□□□□□ -1.71
GPNMB-201ENST00000258733 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
GPNMB-201ENST00000258733 NIPBLQ6KC79 2804 aaeCLIP4.37□□□□□ -1.71
GPNMB-201ENST00000258733 SPRR1AP35321 89 aa4.36□□□□□ -1.71
GPNMB-201ENST00000258733 BIRC6Q9NR09 4857 aa4.35□□□□□ -1.71
GPNMB-201ENST00000258733 LY6EQ16553 131 aa4.35□□□□□ -1.71
GPNMB-201ENST00000258733 ANAPC11Q9NYG5 84 aa4.35□□□□□ -1.71
GPNMB-201ENST00000258733 KRTAP13-3Q3SY46 172 aa4.34□□□□□ -1.71
GPNMB-201ENST00000258733 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.72
GPNMB-201ENST00000258733 ATRQ13535 2644 aa4.33□□□□□ -1.72
GPNMB-201ENST00000258733 C4orf3Q8WVX3 66 aa4.33□□□□□ -1.72
GPNMB-201ENST00000258733 NSD1Q96L73 2696 aaPredicted RBP4.32□□□□□ -1.72
GPNMB-201ENST00000258733 CSPG4Q6UVK1 2322 aa4.32□□□□□ -1.72
GPNMB-201ENST00000258733 ZANQ9Y493 2812 aa4.32□□□□□ -1.72
GPNMB-201ENST00000258733 LELP1Q5T871 98 aa4.32□□□□□ -1.72
GPNMB-201ENST00000258733 C16orf74Q96GX8 76 aa4.32□□□□□ -1.72
GPNMB-201ENST00000258733 C10orf99Q6UWK7 81 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms