RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 KRTAP10-11P60412 298 aa6.27□□□□□ -1.41
TRPM1-201ENST00000256552 MKI67P46013 3256 aaKnown RBP6.26□□□□□ -1.41
TRPM1-201ENST00000256552 SEC61BP60468 96 aaKnown RBP6.25□□□□□ -1.41
TRPM1-201ENST00000256552 S4R3F8 94 aa6.24□□□□□ -1.41
TRPM1-201ENST00000256552 Q5W150 140 aa6.23□□□□□ -1.41
TRPM1-201ENST00000256552 H1FX-AS1Q4G0G2 97 aa6.22□□□□□ -1.41
TRPM1-201ENST00000256552 HTTP42858 3142 aa6.22□□□□□ -1.41
TRPM1-201ENST00000256552 KRTAP26-1Q6PEX3 210 aa6.22□□□□□ -1.41
TRPM1-201ENST00000256552 NDUFAF8A1L188 74 aa6.22□□□□□ -1.41
TRPM1-201ENST00000256552 EPG5Q9HCE0 2579 aa6.22□□□□□ -1.41
TRPM1-201ENST00000256552 CHD9Q3L8U1 2897 aa6.22□□□□□ -1.41
TRPM1-201ENST00000256552 Q6ZSA8 131 aa6.21□□□□□ -1.42
TRPM1-201ENST00000256552 A0A087WTM6 91 aa6.21□□□□□ -1.42
TRPM1-201ENST00000256552 SPRR1BP22528 89 aa6.21□□□□□ -1.42
TRPM1-201ENST00000256552 K7EIL1 84 aa6.2□□□□□ -1.42
TRPM1-201ENST00000256552 R4GN34 69 aa6.18□□□□□ -1.42
TRPM1-201ENST00000256552 KRTAP4-16G5E9R7 235 aaPredicted RBP6.17□□□□□ -1.42
TRPM1-201ENST00000256552 FREM2Q5SZK8 3169 aa6.17□□□□□ -1.42
TRPM1-201ENST00000256552 KRTAP24-1Q3LI83 254 aa6.16□□□□□ -1.42
TRPM1-201ENST00000256552 PLAC8Q9NZF1 115 aa6.16□□□□□ -1.42
TRPM1-201ENST00000256552 TRIOO75962 3097 aa6.16□□□□□ -1.42
TRPM1-201ENST00000256552 WWC2-AS2Q96NR7 200 aa6.14□□□□□ -1.43
TRPM1-201ENST00000256552 PLAC4Q8WY50 150 aa6.12□□□□□ -1.43
TRPM1-201ENST00000256552 A8MUU9 505 aa6.12□□□□□ -1.43
TRPM1-201ENST00000256552 NBEAQ8NFP9 2946 aa6.11□□□□□ -1.43
TRPM1-201ENST00000256552 UNC80Q8N2C7 3258 aa6.11□□□□□ -1.43
TRPM1-201ENST00000256552 DNAH14Q0VDD8 3507 aa6.11□□□□□ -1.43
TRPM1-201ENST00000256552 BRCA2P51587 3418 aa6.11□□□□□ -1.43
TRPM1-201ENST00000256552 KRTAP1-3Q8IUG1 177 aa6.1□□□□□ -1.43
TRPM1-201ENST00000256552 RANBP2P49792 3224 aaKnown RBP6.09□□□□□ -1.44
TRPM1-201ENST00000256552 C20orf166-AS1Q96NR2 134 aa6.09□□□□□ -1.44
TRPM1-201ENST00000256552 VPS13AQ96RL7 3174 aa6.08□□□□□ -1.44
TRPM1-201ENST00000256552 NOTCH2NLQ7Z3S9 236 aa6.06□□□□□ -1.44
TRPM1-201ENST00000256552 FRYQ5TBA9 3013 aa6.06□□□□□ -1.44
TRPM1-201ENST00000256552 LAMA3Q16787 3333 aa6.06□□□□□ -1.44
TRPM1-201ENST00000256552 KRTAP1-1Q07627 177 aa6.05□□□□□ -1.44
TRPM1-201ENST00000256552 TRANK1O15050 2925 aa6.05□□□□□ -1.44
TRPM1-201ENST00000256552 USP24Q9UPU5 2620 aa6.04□□□□□ -1.44
TRPM1-201ENST00000256552 M0QZ58 72 aa6.03□□□□□ -1.44
TRPM1-201ENST00000256552 CELSR3Q9NYQ7 3312 aa6.03□□□□□ -1.44
TRPM1-201ENST00000256552 DSPP15924 2871 aaKnown RBP6.01□□□□□ -1.45
TRPM1-201ENST00000256552 MGAQ8IWI9 3026 aa6.01□□□□□ -1.45
TRPM1-201ENST00000256552 PANO1I0J062 215 aa6.01□□□□□ -1.45
TRPM1-201ENST00000256552 GCN1Q92616 2671 aaKnown RBP6.01□□□□□ -1.45
TRPM1-201ENST00000256552 SMR3BP02814 79 aaPredicted RBP6□□□□□ -1.45
TRPM1-201ENST00000256552 CHD6Q8TD26 2715 aa6□□□□□ -1.45
TRPM1-201ENST00000256552 AKAP13Q12802 2813 aa6□□□□□ -1.45
TRPM1-201ENST00000256552 XIRP2A4UGR9 3374 aa5.99□□□□□ -1.45
TRPM1-201ENST00000256552 FLNAP21333 2647 aaKnown RBP5.98□□□□□ -1.45
TRPM1-201ENST00000256552 M0R2T5 61 aa5.98□□□□□ -1.45
TRPM1-201ENST00000256552 FASNP49327 2511 aaKnown RBP5.98□□□□□ -1.45
TRPM1-201ENST00000256552 KALRNO60229 2985 aa5.98□□□□□ -1.45
TRPM1-201ENST00000256552 KRTAP11-1Q8IUC1 163 aa5.97□□□□□ -1.45
TRPM1-201ENST00000256552 UNC79Q9P2D8 2635 aa5.97□□□□□ -1.45
TRPM1-201ENST00000256552 WDFY4Q6ZS81 3184 aa5.97□□□□□ -1.45
TRPM1-201ENST00000256552 VCANP13611 3396 aa5.96□□□□□ -1.45
TRPM1-201ENST00000256552 KRTAP1-5Q9BYS1 174 aa5.96□□□□□ -1.45
TRPM1-201ENST00000256552 KRTAP7-1Q8IUC3 87 aa5.96□□□□□ -1.46
TRPM1-201ENST00000256552 NBEAL2Q6ZNJ1 2754 aa5.94□□□□□ -1.46
TRPM1-201ENST00000256552 CDH23Q9H251 3354 aa5.94□□□□□ -1.46
TRPM1-201ENST00000256552 ATRQ13535 2644 aa5.91□□□□□ -1.46
TRPM1-201ENST00000256552 ITPR3Q14573 2671 aa5.9□□□□□ -1.46
TRPM1-201ENST00000256552 LAMA1P25391 3075 aa5.89□□□□□ -1.47
TRPM1-201ENST00000256552 CENPEQ02224 2701 aa5.88□□□□□ -1.47
TRPM1-201ENST00000256552 MGAM2Q2M2H8 2515 aa5.88□□□□□ -1.47
TRPM1-201ENST00000256552 ITPR1Q14643 2758 aa5.87□□□□□ -1.47
TRPM1-201ENST00000256552 PRUNE2Q8WUY3 3088 aa5.86□□□□□ -1.47
TRPM1-201ENST00000256552 MAP1AP78559 2803 aaPredicted RBP5.85□□□□□ -1.47
TRPM1-201ENST00000256552 FRYLO94915 3013 aa5.83□□□□□ -1.48
TRPM1-201ENST00000256552 SZT2Q5T011 3432 aa5.81□□□□□ -1.48
TRPM1-201ENST00000256552 NBEAL1Q6ZS30 2694 aa5.81□□□□□ -1.48
TRPM1-201ENST00000256552 FLG2Q5D862 2391 aaPredicted RBP5.81□□□□□ -1.48
TRPM1-201ENST00000256552 REV3LO60673 3130 aa5.8□□□□□ -1.48
TRPM1-201ENST00000256552 DMBT1Q9UGM3 2413 aaPredicted RBP5.79□□□□□ -1.48
TRPM1-201ENST00000256552 PP632Q6XCG6 107 aa5.79□□□□□ -1.48
TRPM1-201ENST00000256552 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
TRPM1-201ENST00000256552 HECTD1Q9ULT8 2610 aa5.78□□□□□ -1.48
TRPM1-201ENST00000256552 ZZEF1O43149 2961 aa5.78□□□□□ -1.48
TRPM1-201ENST00000256552 HELZ2Q9BYK8 2649 aaKnown RBP5.77□□□□□ -1.49
TRPM1-201ENST00000256552 BAHCC1Q9P281 2608 aa5.76□□□□□ -1.49
TRPM1-201ENST00000256552 H0YAA0 97 aa5.76□□□□□ -1.49
TRPM1-201ENST00000256552 KRTAP13-1Q8IUC0 172 aa5.76□□□□□ -1.49
TRPM1-201ENST00000256552 ADGRG4Q8IZF6 3080 aa5.76□□□□□ -1.49
TRPM1-201ENST00000256552 SPEGQ15772 3267 aa5.76□□□□□ -1.49
TRPM1-201ENST00000256552 P0C880 135 aa5.76□□□□□ -1.49
TRPM1-201ENST00000256552 NOTCH1P46531 2555 aa5.75□□□□□ -1.49
TRPM1-201ENST00000256552 TACC2O95359 2948 aa5.75□□□□□ -1.49
TRPM1-201ENST00000256552 TNP1P09430 55 aa5.74□□□□□ -1.49
TRPM1-201ENST00000256552 LRBAP50851 2863 aa5.74□□□□□ -1.49
TRPM1-201ENST00000256552 ASH1LQ9NR48 2969 aaKnown RBP5.72□□□□□ -1.49
TRPM1-201ENST00000256552 COL6A3P12111 3177 aa5.72□□□□□ -1.49
TRPM1-201ENST00000256552 MAST4O15021 2626 aa5.7□□□□□ -1.5
TRPM1-201ENST00000256552 BOD1L1Q8NFC6 3051 aa5.69□□□□□ -1.5
TRPM1-201ENST00000256552 TEX15Q9BXT5 2789 aa5.69□□□□□ -1.5
TRPM1-201ENST00000256552 ZNF292O60281 2723 aa5.67□□□□□ -1.5
TRPM1-201ENST00000256552 RPS29P62273 56 aaKnown RBP5.67□□□□□ -1.5
TRPM1-201ENST00000256552 CFAP46Q8IYW2 2715 aa5.67□□□□□ -1.5
TRPM1-201ENST00000256552 COL6A5A8TX70 2615 aa5.67□□□□□ -1.5
TRPM1-201ENST00000256552 SETXQ7Z333 2677 aaKnown RBP5.66□□□□□ -1.5
TRPM1-201ENST00000256552 KRTAP10-2P60368 255 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms