RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 HAMPP81172 84 aa11.77□□□□□ -0.53
TRIM47-201ENST00000254816 EPM2AB3EWF7 344 aa11.76□□□□□ -0.53
TRIM47-201ENST00000254816 LINC01547P58512 204 aaPredicted RBP11.76□□□□□ -0.53
TRIM47-201ENST00000254816 ST20-AS1Q8NBB2 130 aa11.76□□□□□ -0.53
TRIM47-201ENST00000254816 PLAC8Q9NZF1 115 aa11.72□□□□□ -0.53
TRIM47-201ENST00000254816 Q8N377 158 aa11.72□□□□□ -0.53
TRIM47-201ENST00000254816 FAM30AQ9NZY2 134 aa11.72□□□□□ -0.53
TRIM47-201ENST00000254816 HIGD2AQ9BW72 106 aa11.71□□□□□ -0.53
TRIM47-201ENST00000254816 SCXQ7RTU7 201 aa11.71□□□□□ -0.54
TRIM47-201ENST00000254816 SERP2Q8N6R1 65 aa11.7□□□□□ -0.54
TRIM47-201ENST00000254816 CYSTM1Q9H1C7 97 aa11.68□□□□□ -0.54
TRIM47-201ENST00000254816 KRTAP10-1P60331 282 aa11.67□□□□□ -0.54
TRIM47-201ENST00000254816 UBE2AP49459 152 aa11.67□□□□□ -0.54
TRIM47-201ENST00000254816 BCE1O60756 84 aa11.66□□□□□ -0.54
TRIM47-201ENST00000254816 RYR2Q92736 4967 aa11.66□□□□□ -0.54
TRIM47-201ENST00000254816 CRYGAP11844 174 aa11.66□□□□□ -0.54
TRIM47-201ENST00000254816 SRRM2Q9UQ35 2752 aaKnown RBP11.66□□□□□ -0.54
TRIM47-201ENST00000254816 KMT2CQ8NEZ4 4911 aaKnown RBP11.65□□□□□ -0.54
TRIM47-201ENST00000254816 IGLV5-48A0A075B6I7 105 aa11.65□□□□□ -0.55
TRIM47-201ENST00000254816 CXCL6P80162 114 aa11.65□□□□□ -0.55
TRIM47-201ENST00000254816 PSORS1C2Q9UIG4 136 aa11.64□□□□□ -0.55
TRIM47-201ENST00000254816 H0Y9J4 135 aa11.63□□□□□ -0.55
TRIM47-201ENST00000254816 CIRBP-AS1Q8TBR5 109 aa11.63□□□□□ -0.55
TRIM47-201ENST00000254816 KRTAP13-1Q8IUC0 172 aa11.61□□□□□ -0.55
TRIM47-201ENST00000254816 PKHD1P08F94 4074 aa11.6□□□□□ -0.55
TRIM47-201ENST00000254816 C1orf137Q5JT78 98 aa11.6□□□□□ -0.55
TRIM47-201ENST00000254816 Q6ZSA8 131 aa11.59□□□□□ -0.55
TRIM47-201ENST00000254816 SMIM20Q8N5G0 67 aa11.58□□□□□ -0.55
TRIM47-201ENST00000254816 Q8N9L7 120 aa11.58□□□□□ -0.56
TRIM47-201ENST00000254816 SMIM29Q86T20 159 aa11.57□□□□□ -0.56
TRIM47-201ENST00000254816 NREPQ16612 68 aa11.57□□□□□ -0.56
TRIM47-201ENST00000254816 LINC00336Q6ZUF6 198 aa11.56□□□□□ -0.56
TRIM47-201ENST00000254816 A0A1W2PNM2 257 aa11.55□□□□□ -0.56
TRIM47-201ENST00000254816 LRP1BQ9NZR2 4599 aa11.53□□□□□ -0.56
TRIM47-201ENST00000254816 BPY2O14599 106 aa11.51□□□□□ -0.57
TRIM47-201ENST00000254816 C20orf197Q8N268 126 aa11.51□□□□□ -0.57
TRIM47-201ENST00000254816 A0A1B0GVY2 172 aa11.5□□□□□ -0.57
TRIM47-201ENST00000254816 IGKV4-1P06312 121 aa11.49□□□□□ -0.57
TRIM47-201ENST00000254816 TRAV7A0A075B6U4 112 aa11.49□□□□□ -0.57
TRIM47-201ENST00000254816 A0A0G2JQZ4 141 aa11.48□□□□□ -0.57
TRIM47-201ENST00000254816 ZNF861PO60384 105 aa11.48□□□□□ -0.57
TRIM47-201ENST00000254816 Q8NBF4 154 aa11.48□□□□□ -0.57
TRIM47-201ENST00000254816 DYNC1H1Q14204 4646 aaKnown RBP11.48□□□□□ -0.57
TRIM47-201ENST00000254816 F8WEM9 126 aa11.47□□□□□ -0.57
TRIM47-201ENST00000254816 IGLV7-43P04211 117 aa11.47□□□□□ -0.57
TRIM47-201ENST00000254816 SPRR1BP22528 89 aa11.47□□□□□ -0.57
TRIM47-201ENST00000254816 SPRR4Q96PI1 79 aa11.44□□□□□ -0.58
TRIM47-201ENST00000254816 TMEM258P61165 79 aa11.44□□□□□ -0.58
TRIM47-201ENST00000254816 IGFL1Q6UW32 110 aa11.42□□□□□ -0.58
TRIM47-201ENST00000254816 ANAPC11Q9NYG5 84 aa11.41□□□□□ -0.58
TRIM47-201ENST00000254816 RYR3Q15413 4870 aa11.41□□□□□ -0.58
TRIM47-201ENST00000254816 SNURFQ9Y675 71 aa11.4□□□□□ -0.58
TRIM47-201ENST00000254816 VPS13BQ7Z7G8 4022 aa11.39□□□□□ -0.59
TRIM47-201ENST00000254816 A0A1B0GW54 56 aa11.39□□□□□ -0.59
TRIM47-201ENST00000254816 IGLV8-61A0A075B6I0 122 aa11.38□□□□□ -0.59
TRIM47-201ENST00000254816 ZNF706Q9Y5V0 76 aaPredicted RBP11.38□□□□□ -0.59
TRIM47-201ENST00000254816 IGLV9-49A0A0B4J1Y8 123 aa11.37□□□□□ -0.59
TRIM47-201ENST00000254816 LINC00483Q53H64 154 aa11.37□□□□□ -0.59
TRIM47-201ENST00000254816 J3KT08 172 aa11.35□□□□□ -0.59
TRIM47-201ENST00000254816 APOBP04114 4563 aaKnown RBP11.35□□□□□ -0.59
TRIM47-201ENST00000254816 H7BZZ5 65 aa11.33□□□□□ -0.6
TRIM47-201ENST00000254816 DSCR10P59022 87 aa11.33□□□□□ -0.6
TRIM47-201ENST00000254816 KLKP1Q107X0 134 aa11.33□□□□□ -0.6
TRIM47-201ENST00000254816 K7EQZ3 153 aa11.31□□□□□ -0.6
TRIM47-201ENST00000254816 SMR3BP02814 79 aaPredicted RBP11.31□□□□□ -0.6
TRIM47-201ENST00000254816 DEFB116Q30KQ4 102 aa11.31□□□□□ -0.6
TRIM47-201ENST00000254816 OCR1Q9BZK8 76 aa11.3□□□□□ -0.6
TRIM47-201ENST00000254816 A0A087WSZ3 146 aa11.29□□□□□ -0.6
TRIM47-201ENST00000254816 OXTP01178 125 aa11.28□□□□□ -0.6
TRIM47-201ENST00000254816 MOBPQ13875 183 aa11.28□□□□□ -0.6
TRIM47-201ENST00000254816 FAM236DA0A1B0GTK5 79 aa11.26□□□□□ -0.61
TRIM47-201ENST00000254816 FAM236CP0DP71 79 aa11.26□□□□□ -0.61
TRIM47-201ENST00000254816 RPS28P62857 69 aaKnown RBP11.26□□□□□ -0.61
TRIM47-201ENST00000254816 TMEM254Q8TBM7 123 aa11.26□□□□□ -0.61
TRIM47-201ENST00000254816 RPL37AP61513 92 aaKnown RBP11.24□□□□□ -0.61
TRIM47-201ENST00000254816 HRCT1Q6UXD1 115 aa11.23□□□□□ -0.61
TRIM47-201ENST00000254816 FAT1Q14517 4588 aa11.21□□□□□ -0.61
TRIM47-201ENST00000254816 A0A087X002 238 aa11.18□□□□□ -0.62
TRIM47-201ENST00000254816 A0A0U1RQV1 116 aa11.18□□□□□ -0.62
TRIM47-201ENST00000254816 HCG22E2RYF7 251 aa11.16□□□□□ -0.62
TRIM47-201ENST00000254816 NDUFC1O43677 76 aa11.16□□□□□ -0.62
TRIM47-201ENST00000254816 KRTAP1-4P0C5Y4 121 aa11.15□□□□□ -0.62
TRIM47-201ENST00000254816 KRTAP13-2Q52LG2 175 aa11.14□□□□□ -0.63
TRIM47-201ENST00000254816 WFDC13Q8IUB5 93 aa11.14□□□□□ -0.63
TRIM47-201ENST00000254816 KRTAP10-4P60372 401 aaPredicted RBP11.11□□□□□ -0.63
TRIM47-201ENST00000254816 SPINK6Q6UWN8 80 aa11.11□□□□□ -0.63
TRIM47-201ENST00000254816 SERP1Q9Y6X1 66 aa11.1□□□□□ -0.63
TRIM47-201ENST00000254816 FAM229BQ4G0N7 80 aa11.09□□□□□ -0.63
TRIM47-201ENST00000254816 PLA2G1BP04054 148 aaKnown RBP11.08□□□□□ -0.64
TRIM47-201ENST00000254816 LINC00472Q9H8W2 130 aa11.08□□□□□ -0.64
TRIM47-201ENST00000254816 SSBP3-AS1Q7Z2R9 100 aa11.07□□□□□ -0.64
TRIM47-201ENST00000254816 HSPG2P98160 4391 aa11.06□□□□□ -0.64
TRIM47-201ENST00000254816 PRR15Q8IV56 129 aa11.04□□□□□ -0.64
TRIM47-201ENST00000254816 A8MWP4 228 aa11.02□□□□□ -0.64
TRIM47-201ENST00000254816 EPPK1P58107 5090 aaKnown RBP11.01□□□□□ -0.65
TRIM47-201ENST00000254816 KRTAP29-1A8MX34 341 aaPredicted RBP11.01□□□□□ -0.65
TRIM47-201ENST00000254816 ATP5EP56381 51 aaPredicted RBP11.01□□□□□ -0.65
TRIM47-201ENST00000254816 Q5XG85 94 aa11.01□□□□□ -0.65
TRIM47-201ENST00000254816 Q96NJ1 140 aa11.01□□□□□ -0.65
TRIM47-201ENST00000254816 CASC2Q6XLA1 102 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms