RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 SPRR1AP35321 89 aa13.19□□□□□ -0.3
RARA-201ENST00000254066 PRR4Q16378 134 aa13.18□□□□□ -0.3
RARA-201ENST00000254066 Q8N9P0 234 aaPredicted RBP13.17□□□□□ -0.3
RARA-201ENST00000254066 HTN3P15516 51 aa13.16□□□□□ -0.3
RARA-201ENST00000254066 OXLD1Q5BKU9 147 aa13.15□□□□□ -0.3
RARA-201ENST00000254066 IGLV5-37A0A075B6J1 123 aa13.14□□□□□ -0.31
RARA-201ENST00000254066 LINC00208Q96KT6 92 aa13.14□□□□□ -0.31
RARA-201ENST00000254066 SERTAD4-AS1Q5TG53 156 aa13.14□□□□□ -0.31
RARA-201ENST00000254066 TLX1NBP0CAT3 122 aa13.13□□□□□ -0.31
RARA-201ENST00000254066 CHKB-CPT1BH3BT56 60 aa13.12□□□□□ -0.31
RARA-201ENST00000254066 IGLV1-50A0A075B6I6 118 aa13.12□□□□□ -0.31
RARA-201ENST00000254066 H3BNG1 76 aa13.11□□□□□ -0.31
RARA-201ENST00000254066 WFDC10BQ8IUB3 73 aa13.1□□□□□ -0.31
RARA-201ENST00000254066 TENM1Q9UKZ4 2725 aa13.09□□□□□ -0.31
RARA-201ENST00000254066 Q75L30 129 aa13.08□□□□□ -0.32
RARA-201ENST00000254066 IGKV2D-24A0A075B6R9 120 aa13.07□□□□□ -0.32
RARA-201ENST00000254066 KRTAP29-1A8MX34 341 aaPredicted RBP13.07□□□□□ -0.32
RARA-201ENST00000254066 LOC101927531A0A1B0GV80 90 aa13.06□□□□□ -0.32
RARA-201ENST00000254066 LINC00476Q8WZB0 136 aa13.05□□□□□ -0.32
RARA-201ENST00000254066 PRR15LQ9BU68 103 aa13.04□□□□□ -0.32
RARA-201ENST00000254066 H0Y9P7 68 aa13.03□□□□□ -0.32
RARA-201ENST00000254066 WFDC13Q8IUB5 93 aa13.03□□□□□ -0.32
RARA-201ENST00000254066 RPL37AP8A6NKH3 93 aa13.02□□□□□ -0.33
RARA-201ENST00000254066 C9orf163Q8N9P6 203 aa13.01□□□□□ -0.33
RARA-201ENST00000254066 NBEAL1Q6ZS30 2694 aa13□□□□□ -0.33
RARA-201ENST00000254066 IGLV8-61A0A075B6I0 122 aa13□□□□□ -0.33
RARA-201ENST00000254066 CDC42SE1Q9NRR8 79 aa12.99□□□□□ -0.33
RARA-201ENST00000254066 IGFL1Q6UW32 110 aa12.99□□□□□ -0.33
RARA-201ENST00000254066 PRB2P02812 416 aaPredicted RBP12.98□□□□□ -0.33
RARA-201ENST00000254066 LINC01554Q52M75 96 aa12.97□□□□□ -0.33
RARA-201ENST00000254066 LINC01556Q5JQF7 62 aa12.97□□□□□ -0.33
RARA-201ENST00000254066 KRTAP10-3P60369 221 aa12.96□□□□□ -0.33
RARA-201ENST00000254066 CASC2Q6XLA1 102 aa12.96□□□□□ -0.34
RARA-201ENST00000254066 A6NED7 52 aa12.93□□□□□ -0.34
RARA-201ENST00000254066 DEFB116Q30KQ4 102 aa12.93□□□□□ -0.34
RARA-201ENST00000254066 MGAM2Q2M2H8 2515 aa12.92□□□□□ -0.34
RARA-201ENST00000254066 IGLV7-46A0A075B6I9 117 aa12.92□□□□□ -0.34
RARA-201ENST00000254066 A0A087WSZ3 146 aa12.91□□□□□ -0.34
RARA-201ENST00000254066 COA5Q86WW8 74 aa12.91□□□□□ -0.34
RARA-201ENST00000254066 LINC00313P59037 77 aa12.91□□□□□ -0.34
RARA-201ENST00000254066 FAM168BA1KXE4 195 aa12.9□□□□□ -0.34
RARA-201ENST00000254066 REG3GQ6UW15 175 aa12.9□□□□□ -0.34
RARA-201ENST00000254066 KRTAP7-1Q8IUC3 87 aa12.89□□□□□ -0.35
RARA-201ENST00000254066 NBEAL2Q6ZNJ1 2754 aa12.88□□□□□ -0.35
RARA-201ENST00000254066 CNBPP62633 177 aaKnown RBP12.88□□□□□ -0.35
RARA-201ENST00000254066 A8MWP4 228 aa12.87□□□□□ -0.35
RARA-201ENST00000254066 MOBPQ13875 183 aa12.86□□□□□ -0.35
RARA-201ENST00000254066 LINC01558Q9Y6Z2 57 aa12.86□□□□□ -0.35
RARA-201ENST00000254066 RPL37AP61513 92 aaKnown RBP12.85□□□□□ -0.35
RARA-201ENST00000254066 TRRAPQ9Y4A5 3859 aa12.84□□□□□ -0.35
RARA-201ENST00000254066 PLAC8Q9NZF1 115 aa12.84□□□□□ -0.35
RARA-201ENST00000254066 PKD1L1Q8TDX9 2849 aa12.83□□□□□ -0.36
RARA-201ENST00000254066 A0A0G2JQZ4 141 aa12.8□□□□□ -0.36
RARA-201ENST00000254066 A0A1W2PNN7 141 aa12.8□□□□□ -0.36
RARA-201ENST00000254066 DNAH10OSP0CZ25 163 aa12.8□□□□□ -0.36
RARA-201ENST00000254066 MEGF8Q7Z7M0 2845 aa12.79□□□□□ -0.36
RARA-201ENST00000254066 LINC00472Q9H8W2 130 aa12.79□□□□□ -0.36
RARA-201ENST00000254066 CMYA5Q8N3K9 4069 aa12.74□□□□□ -0.37
RARA-201ENST00000254066 TP53AIP1Q9HCN2 124 aa12.74□□□□□ -0.37
RARA-201ENST00000254066 MMP24-AS1A0A0U1RRL7 71 aa12.72□□□□□ -0.37
RARA-201ENST00000254066 SPRR1BP22528 89 aa12.72□□□□□ -0.37
RARA-201ENST00000254066 ASB16-AS1Q495Z4 193 aa12.7□□□□□ -0.38
RARA-201ENST00000254066 VWFP04275 2813 aa12.7□□□□□ -0.38
RARA-201ENST00000254066 PLA2G1BP04054 148 aaKnown RBP12.66□□□□□ -0.38
RARA-201ENST00000254066 PRLHP81277 87 aa12.66□□□□□ -0.38
RARA-201ENST00000254066 SPAG11AQ6PDA7 123 aa12.66□□□□□ -0.38
RARA-201ENST00000254066 Q6ZR54 194 aa12.66□□□□□ -0.38
RARA-201ENST00000254066 H0Y9J4 135 aa12.65□□□□□ -0.38
RARA-201ENST00000254066 NOTCH1P46531 2555 aa12.64□□□□□ -0.39
RARA-201ENST00000254066 DEFB131BA0A096LNP1 70 aa12.63□□□□□ -0.39
RARA-201ENST00000254066 A0A087X002 238 aa12.63□□□□□ -0.39
RARA-201ENST00000254066 PRAC1Q96KF2 57 aa12.63□□□□□ -0.39
RARA-201ENST00000254066 PCOTHQ58A44 107 aa12.61□□□□□ -0.39
RARA-201ENST00000254066 CASC10Q5T4H9 136 aa12.61□□□□□ -0.39
RARA-201ENST00000254066 SPINK7P58062 85 aa12.58□□□□□ -0.4
RARA-201ENST00000254066 IGKV2-24A0A0C4DH68 120 aa12.56□□□□□ -0.4
RARA-201ENST00000254066 HRES1P13985 223 aa12.56□□□□□ -0.4
RARA-201ENST00000254066 PRKDCP78527 4128 aaKnown RBP12.54□□□□□ -0.4
RARA-201ENST00000254066 A0A096LNI7 61 aa12.5□□□□□ -0.41
RARA-201ENST00000254066 C8orf17Q9NRJ1 99 aa12.49□□□□□ -0.41
RARA-201ENST00000254066 TGP01266 2768 aa12.49□□□□□ -0.41
RARA-201ENST00000254066 K7EIL1 84 aa12.49□□□□□ -0.41
RARA-201ENST00000254066 KRTAP10-11P60412 298 aa12.48□□□□□ -0.41
RARA-201ENST00000254066 ZNF706Q9Y5V0 76 aaPredicted RBP12.48□□□□□ -0.41
RARA-201ENST00000254066 RETNLBQ9BQ08 111 aa12.47□□□□□ -0.41
RARA-201ENST00000254066 Q96NJ1 140 aa12.47□□□□□ -0.41
RARA-201ENST00000254066 DNAH3Q8TD57 4116 aa12.46□□□□□ -0.41
RARA-201ENST00000254066 ADM2Q7Z4H4 148 aa12.42□□□□□ -0.42
RARA-201ENST00000254066 MRPL34Q9BQ48 92 aaKnown RBP12.39□□□□□ -0.43
RARA-201ENST00000254066 A0A1B0GVX0 72 aa12.39□□□□□ -0.43
RARA-201ENST00000254066 KRTAP11-1Q8IUC1 163 aa12.35□□□□□ -0.43
RARA-201ENST00000254066 ACYP2P14621 99 aa12.32□□□□□ -0.44
RARA-201ENST00000254066 IGHV6-1A0A0B4J1U7 121 aa12.32□□□□□ -0.44
RARA-201ENST00000254066 RTL8CO15255 209 aa12.32□□□□□ -0.44
RARA-201ENST00000254066 A0A0A0MQY5 61 aa12.31□□□□□ -0.44
RARA-201ENST00000254066 CDK2AP2O75956 126 aa12.3□□□□□ -0.44
RARA-201ENST00000254066 KRTAP13-1Q8IUC0 172 aa12.3□□□□□ -0.44
RARA-201ENST00000254066 WWC2-AS2Q96NR7 200 aa12.3□□□□□ -0.44
RARA-201ENST00000254066 C14orf177Q52M58 125 aa12.28□□□□□ -0.44
RARA-201ENST00000254066 DNAH1Q9P2D7 4330 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms