RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 C9orf153Q5TBE3 101 aa13.35□□□□□ -0.27
APOE-201ENST00000252486 LYRM7Q5U5X0 104 aa13.35□□□□□ -0.27
APOE-201ENST00000252486 Q8NBF4 154 aa13.35□□□□□ -0.27
APOE-201ENST00000252486 SNHG12Q9BXW3 62 aa13.35□□□□□ -0.27
APOE-201ENST00000252486 SMIM29Q86T20 159 aa13.34□□□□□ -0.27
APOE-201ENST00000252486 PCP4L1A6NKN8 68 aa13.33□□□□□ -0.28
APOE-201ENST00000252486 LINC00304Q8N9R0 145 aa13.33□□□□□ -0.28
APOE-201ENST00000252486 H3BQ85 93 aa13.32□□□□□ -0.28
APOE-201ENST00000252486 LST1O00453 97 aa13.31□□□□□ -0.28
APOE-201ENST00000252486 TRACP01848 142 aa13.31□□□□□ -0.28
APOE-201ENST00000252486 SPAG11AQ6PDA7 123 aa13.31□□□□□ -0.28
APOE-201ENST00000252486 NAA38Q9BRA0 125 aaKnown RBP13.31□□□□□ -0.28
APOE-201ENST00000252486 F8WEM9 126 aa13.3□□□□□ -0.28
APOE-201ENST00000252486 C4orf48Q5BLP8 95 aa13.3□□□□□ -0.28
APOE-201ENST00000252486 C9orf118A6NHY6 69 aa13.29□□□□□ -0.28
APOE-201ENST00000252486 TAX1BP3O14907 124 aa13.29□□□□□ -0.28
APOE-201ENST00000252486 H3BUT2 72 aa13.28□□□□□ -0.28
APOE-201ENST00000252486 COL5A1-AS1Q5SY13 56 aa13.28□□□□□ -0.28
APOE-201ENST00000252486 ORMDL1Q9P0S3 153 aa13.27□□□□□ -0.29
APOE-201ENST00000252486 ATXN8Q156A1 80 aa13.26□□□□□ -0.29
APOE-201ENST00000252486 TRBV20-1A0A075B6N2 111 aa13.24□□□□□ -0.29
APOE-201ENST00000252486 FABP2P12104 132 aa13.23□□□□□ -0.29
APOE-201ENST00000252486 TMEM256-PLSCR3K7ERE1 68 aa13.22□□□□□ -0.29
APOE-201ENST00000252486 TCL1BO95988 128 aa13.22□□□□□ -0.29
APOE-201ENST00000252486 SPINK1P00995 79 aa13.22□□□□□ -0.29
APOE-201ENST00000252486 IGLV8-61A0A075B6I0 122 aa13.2□□□□□ -0.3
APOE-201ENST00000252486 A0A1W2PPM0 123 aa13.2□□□□□ -0.3
APOE-201ENST00000252486 Q6JHZ5 121 aa13.2□□□□□ -0.3
APOE-201ENST00000252486 NDUFV3P56181 108 aaKnown RBP13.19□□□□□ -0.3
APOE-201ENST00000252486 RPS29P62273 56 aaKnown RBP13.17□□□□□ -0.3
APOE-201ENST00000252486 CD164Q04900 197 aa13.17□□□□□ -0.3
APOE-201ENST00000252486 UBE2V1Q13404 147 aa13.15□□□□□ -0.3
APOE-201ENST00000252486 HERC1Q15751 4861 aa13.12□□□□□ -0.31
APOE-201ENST00000252486 H3BMG7 143 aa13.12□□□□□ -0.31
APOE-201ENST00000252486 BAALC-AS2P0C853 105 aa13.12□□□□□ -0.31
APOE-201ENST00000252486 IGFL1Q6UW32 110 aa13.09□□□□□ -0.31
APOE-201ENST00000252486 LIMD2Q9BT23 127 aa13.08□□□□□ -0.32
APOE-201ENST00000252486 HRCT1Q6UXD1 115 aa13.07□□□□□ -0.32
APOE-201ENST00000252486 ANKRD29Q8N6D5 301 aa13.07□□□□□ -0.32
APOE-201ENST00000252486 SPCS1Q9Y6A9 102 aa13.07□□□□□ -0.32
APOE-201ENST00000252486 C9JAW5 83 aa13.06□□□□□ -0.32
APOE-201ENST00000252486 A0A0G2JQZ4 141 aa13.04□□□□□ -0.32
APOE-201ENST00000252486 Q5XG85 94 aa13.01□□□□□ -0.33
APOE-201ENST00000252486 H3BT86 120 aa13□□□□□ -0.33
APOE-201ENST00000252486 RBM3P98179 157 aaKnown RBP12.99□□□□□ -0.33
APOE-201ENST00000252486 Q6Q795 121 aa12.99□□□□□ -0.33
APOE-201ENST00000252486 JMJD7-PLA2G4BH0Y9G9 81 aa12.98□□□□□ -0.33
APOE-201ENST00000252486 PRR4Q16378 134 aa12.98□□□□□ -0.33
APOE-201ENST00000252486 TEN1Q86WV5 123 aa12.98□□□□□ -0.33
APOE-201ENST00000252486 TRBV7-7A0A0K0K1E9 115 aa12.97□□□□□ -0.33
APOE-201ENST00000252486 A0A1B0GV72 72 aa12.96□□□□□ -0.33
APOE-201ENST00000252486 K7EP34 96 aa12.96□□□□□ -0.33
APOE-201ENST00000252486 FP248Q71RG6 208 aaPredicted RBP12.96□□□□□ -0.33
APOE-201ENST00000252486 RETNLBQ9BQ08 111 aa12.96□□□□□ -0.33
APOE-201ENST00000252486 DSCR8Q96T75 97 aa12.95□□□□□ -0.34
APOE-201ENST00000252486 GTF2H5Q6ZYL4 71 aa12.94□□□□□ -0.34
APOE-201ENST00000252486 TRBV7-4A0A0J9YYF1 115 aa12.93□□□□□ -0.34
APOE-201ENST00000252486 A0A1W2PNM2 257 aa12.89□□□□□ -0.35
APOE-201ENST00000252486 ASB16-AS1Q495Z4 193 aa12.89□□□□□ -0.35
APOE-201ENST00000252486 MTURNQ8N3F0 131 aa12.89□□□□□ -0.35
APOE-201ENST00000252486 SS18L2Q9UHA2 77 aa12.89□□□□□ -0.35
APOE-201ENST00000252486 CCKP06307 115 aa12.88□□□□□ -0.35
APOE-201ENST00000252486 PDE6GP18545 87 aa12.88□□□□□ -0.35
APOE-201ENST00000252486 IGLV7-46A0A075B6I9 117 aa12.87□□□□□ -0.35
APOE-201ENST00000252486 OBSCN-AS1Q96MR7 158 aa12.87□□□□□ -0.35
APOE-201ENST00000252486 HMCN2Q8NDA2 5059 aa12.86□□□□□ -0.35
APOE-201ENST00000252486 LOC110117498A0A087WWA1 95 aa12.85□□□□□ -0.35
APOE-201ENST00000252486 C21orf62-AS1Q17RA5 79 aa12.85□□□□□ -0.35
APOE-201ENST00000252486 A0A087WSZ3 146 aa12.83□□□□□ -0.36
APOE-201ENST00000252486 C1orf195Q5TG92 126 aa12.83□□□□□ -0.36
APOE-201ENST00000252486 VPS25Q9BRG1 176 aa12.81□□□□□ -0.36
APOE-201ENST00000252486 PRO0461Q9UI25 63 aa12.81□□□□□ -0.36
APOE-201ENST00000252486 Q6ZQT0 140 aa12.8□□□□□ -0.36
APOE-201ENST00000252486 SMCPP49901 116 aaPredicted RBP12.79□□□□□ -0.36
APOE-201ENST00000252486 C14orf132Q9NPU4 83 aa12.79□□□□□ -0.36
APOE-201ENST00000252486 A0A1B0GW54 56 aa12.78□□□□□ -0.36
APOE-201ENST00000252486 TPRXLQ17RH7 258 aa12.78□□□□□ -0.36
APOE-201ENST00000252486 F8W1H4 67 aa12.77□□□□□ -0.37
APOE-201ENST00000252486 KRTAP13-3Q3SY46 172 aa12.69□□□□□ -0.38
APOE-201ENST00000252486 CDIP1Q9H305 208 aa12.67□□□□□ -0.38
APOE-201ENST00000252486 Q96NJ1 140 aa12.64□□□□□ -0.39
APOE-201ENST00000252486 A0A1B0GV90 55 aa12.62□□□□□ -0.39
APOE-201ENST00000252486 LINC00472Q9H8W2 130 aa12.61□□□□□ -0.39
APOE-201ENST00000252486 ETDBQ3ZM63 59 aa12.59□□□□□ -0.39
APOE-201ENST00000252486 IGKV4-1P06312 121 aa12.58□□□□□ -0.4
APOE-201ENST00000252486 LPAP08519 4548 aa12.57□□□□□ -0.4
APOE-201ENST00000252486 SIGMAR1Q99720 223 aa12.57□□□□□ -0.4
APOE-201ENST00000252486 J3KT08 172 aa12.56□□□□□ -0.4
APOE-201ENST00000252486 NREPQ16612 68 aa12.55□□□□□ -0.4
APOE-201ENST00000252486 LRP2P98164 4655 aa12.55□□□□□ -0.4
APOE-201ENST00000252486 C9orf92A6NGG3 77 aa12.54□□□□□ -0.4
APOE-201ENST00000252486 DEFB116Q30KQ4 102 aa12.51□□□□□ -0.41
APOE-201ENST00000252486 XP32Q5T750 250 aa12.49□□□□□ -0.41
APOE-201ENST00000252486 NDUFB1O75438 58 aa12.43□□□□□ -0.42
APOE-201ENST00000252486 UBL5Q9BZL1 73 aa12.42□□□□□ -0.42
APOE-201ENST00000252486 A0A1B0GVX0 72 aa12.41□□□□□ -0.42
APOE-201ENST00000252486 Q6ZVQ6 151 aa12.41□□□□□ -0.42
APOE-201ENST00000252486 LINC00313P59037 77 aa12.4□□□□□ -0.42
APOE-201ENST00000252486 SEC61BP60468 96 aaKnown RBP12.4□□□□□ -0.42
APOE-201ENST00000252486 A8MWP4 228 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms