RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 ANAPC11Q9NYG5 84 aa2.96□□□□□ -1.94
VPS13C-201ENST00000249837 NUPR2A6NF83 97 aa2.95□□□□□ -1.94
VPS13C-201ENST00000249837 A8MWP4 228 aa2.95□□□□□ -1.94
VPS13C-201ENST00000249837 NBDYA0A0U1RRE5 68 aa2.94□□□□□ -1.94
VPS13C-201ENST00000249837 TLX1NBP0CAT3 122 aa2.94□□□□□ -1.94
VPS13C-201ENST00000249837 COA5Q86WW8 74 aa2.94□□□□□ -1.94
VPS13C-201ENST00000249837 DSCR10P59022 87 aa2.94□□□□□ -1.94
VPS13C-201ENST00000249837 FAM229BQ4G0N7 80 aa2.94□□□□□ -1.94
VPS13C-201ENST00000249837 Q5XG85 94 aa2.93□□□□□ -1.94
VPS13C-201ENST00000249837 SPINK1P00995 79 aa2.93□□□□□ -1.94
VPS13C-201ENST00000249837 C1orf134Q5TEV5 83 aa2.93□□□□□ -1.94
VPS13C-201ENST00000249837 COL12A1Q99715 3063 aa2.93□□□□□ -1.94
VPS13C-201ENST00000249837 CRYBG3Q68DQ2 2970 aa2.93□□□□□ -1.94
VPS13C-201ENST00000249837 C8orf17Q9NRJ1 99 aa2.93□□□□□ -1.94
VPS13C-201ENST00000249837 TP53AIP1Q9HCN2 124 aa2.93□□□□□ -1.94
VPS13C-201ENST00000249837 H3BPC8 53 aa2.93□□□□□ -1.94
VPS13C-201ENST00000249837 KRTAP26-1Q6PEX3 210 aa2.93□□□□□ -1.94
VPS13C-201ENST00000249837 SPACA4Q8TDM5 124 aa2.93□□□□□ -1.94
VPS13C-201ENST00000249837 RTL8CO15255 209 aa2.92□□□□□ -1.94
VPS13C-201ENST00000249837 FP248Q71RG6 208 aaPredicted RBP2.92□□□□□ -1.94
VPS13C-201ENST00000249837 IGLV5-48A0A075B6I7 105 aa2.92□□□□□ -1.94
VPS13C-201ENST00000249837 IGLV5-37A0A075B6J1 123 aa2.92□□□□□ -1.94
VPS13C-201ENST00000249837 TENM1Q9UKZ4 2725 aa2.92□□□□□ -1.94
VPS13C-201ENST00000249837 LOC400499M0QZD8 3231 aa2.91□□□□□ -1.94
VPS13C-201ENST00000249837 IGLV8-61A0A075B6I0 122 aa2.91□□□□□ -1.94
VPS13C-201ENST00000249837 A0A1B0GVX0 72 aa2.9□□□□□ -1.95
VPS13C-201ENST00000249837 C9orf163Q8N9P6 203 aa2.9□□□□□ -1.95
VPS13C-201ENST00000249837 EYSQ5T1H1 3165 aa2.9□□□□□ -1.95
VPS13C-201ENST00000249837 MRPL34Q9BQ48 92 aaKnown RBP2.9□□□□□ -1.95
VPS13C-201ENST00000249837 SPRR4Q96PI1 79 aa2.9□□□□□ -1.95
VPS13C-201ENST00000249837 ACYP2P14621 99 aa2.89□□□□□ -1.95
VPS13C-201ENST00000249837 CNBPP62633 177 aaKnown RBP2.89□□□□□ -1.95
VPS13C-201ENST00000249837 C7orf65Q6ZTY9 151 aa2.89□□□□□ -1.95
VPS13C-201ENST00000249837 WIPF1O43516 503 aa2.89□□□□□ -1.95
VPS13C-201ENST00000249837 PRR26Q8N8Z3 221 aa2.89□□□□□ -1.95
VPS13C-201ENST00000249837 DMXL1Q9Y485 3027 aa2.89□□□□□ -1.95
VPS13C-201ENST00000249837 LINC00313P59037 77 aa2.89□□□□□ -1.95
VPS13C-201ENST00000249837 TENM4Q6N022 2769 aa2.89□□□□□ -1.95
VPS13C-201ENST00000249837 SPRR1AP35321 89 aa2.88□□□□□ -1.95
VPS13C-201ENST00000249837 CYP4F30PQ9H0H9 118 aa2.88□□□□□ -1.95
VPS13C-201ENST00000249837 ZNF861PO60384 105 aa2.88□□□□□ -1.95
VPS13C-201ENST00000249837 ATP11AUNQ6ZP68 121 aa2.88□□□□□ -1.95
VPS13C-201ENST00000249837 A0A087WTM6 91 aa2.88□□□□□ -1.95
VPS13C-201ENST00000249837 PSORS1C2Q9UIG4 136 aa2.88□□□□□ -1.95
VPS13C-201ENST00000249837 A0A1B0GU69 56 aa2.88□□□□□ -1.95
VPS13C-201ENST00000249837 K7ERS5 55 aa2.87□□□□□ -1.95
VPS13C-201ENST00000249837 LOC101927531A0A1B0GV80 90 aa2.87□□□□□ -1.95
VPS13C-201ENST00000249837 APLNQ9ULZ1 77 aa2.87□□□□□ -1.95
VPS13C-201ENST00000249837 KRTAP1-5Q9BYS1 174 aa2.87□□□□□ -1.95
VPS13C-201ENST00000249837 DMDP11532 3685 aa2.86□□□□□ -1.95
VPS13C-201ENST00000249837 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.86□□□□□ -1.95
VPS13C-201ENST00000249837 CD164Q04900 197 aa2.86□□□□□ -1.95
VPS13C-201ENST00000249837 Q1T7F1 81 aa2.86□□□□□ -1.95
VPS13C-201ENST00000249837 SPENQ96T58 3664 aaKnown RBP2.86□□□□□ -1.95
VPS13C-201ENST00000249837 TYMSOSQ8TAI1 123 aa2.85□□□□□ -1.95
VPS13C-201ENST00000249837 Q96NJ1 140 aa2.85□□□□□ -1.95
VPS13C-201ENST00000249837 C8orf87E5RJ46 101 aa2.85□□□□□ -1.95
VPS13C-201ENST00000249837 MMP24-AS1A0A0U1RRL7 71 aa2.85□□□□□ -1.95
VPS13C-201ENST00000249837 FAM229AH3BQW9 127 aa2.85□□□□□ -1.95
VPS13C-201ENST00000249837 IGLV7-43P04211 117 aa2.85□□□□□ -1.95
VPS13C-201ENST00000249837 SPANXA2-OT1Q8N9U9 137 aa2.85□□□□□ -1.95
VPS13C-201ENST00000249837 KRTAP4-16G5E9R7 235 aaPredicted RBP2.84□□□□□ -1.95
VPS13C-201ENST00000249837 LAMA5O15230 3695 aa2.84□□□□□ -1.95
VPS13C-201ENST00000249837 Q8N9P0 234 aaPredicted RBP2.84□□□□□ -1.95
VPS13C-201ENST00000249837 SSBP3-AS1Q7Z2R9 100 aa2.83□□□□□ -1.96
VPS13C-201ENST00000249837 LINC00472Q9H8W2 130 aa2.83□□□□□ -1.96
VPS13C-201ENST00000249837 TNP2Q05952 138 aa2.83□□□□□ -1.96
VPS13C-201ENST00000249837 PDZD2O15018 2839 aa2.83□□□□□ -1.96
VPS13C-201ENST00000249837 ZCCHC13Q8WW36 166 aaKnown RBP2.82□□□□□ -1.96
VPS13C-201ENST00000249837 Q8N1X5 172 aa2.82□□□□□ -1.96
VPS13C-201ENST00000249837 VWFP04275 2813 aa2.82□□□□□ -1.96
VPS13C-201ENST00000249837 KRTAP7-1Q8IUC3 87 aa2.82□□□□□ -1.96
VPS13C-201ENST00000249837 PLA2G1BP04054 148 aaKnown RBP2.82□□□□□ -1.96
VPS13C-201ENST00000249837 IGLV7-46A0A075B6I9 117 aa2.82□□□□□ -1.96
VPS13C-201ENST00000249837 SPRR1BP22528 89 aa2.82□□□□□ -1.96
VPS13C-201ENST00000249837 RELNP78509 3460 aa2.81□□□□□ -1.96
VPS13C-201ENST00000249837 KRTAP11-1Q8IUC1 163 aa2.81□□□□□ -1.96
VPS13C-201ENST00000249837 HRES1P13985 223 aa2.81□□□□□ -1.96
VPS13C-201ENST00000249837 PANO1I0J062 215 aa2.81□□□□□ -1.96
VPS13C-201ENST00000249837 Q5VV11 94 aa2.8□□□□□ -1.96
VPS13C-201ENST00000249837 SMR3BP02814 79 aaPredicted RBP2.8□□□□□ -1.96
VPS13C-201ENST00000249837 MIR22HGQ0VDD5 57 aa2.8□□□□□ -1.96
VPS13C-201ENST00000249837 SMG1Q96Q15 3661 aaKnown RBP2.8□□□□□ -1.96
VPS13C-201ENST00000249837 SPINK7P58062 85 aa2.79□□□□□ -1.96
VPS13C-201ENST00000249837 KTN1-AS1Q86SY8 53 aa2.79□□□□□ -1.96
VPS13C-201ENST00000249837 ZFHX4Q86UP3 3567 aa2.79□□□□□ -1.96
VPS13C-201ENST00000249837 KRTAP29-1A8MX34 341 aaPredicted RBP2.79□□□□□ -1.96
VPS13C-201ENST00000249837 Q75L30 129 aa2.79□□□□□ -1.96
VPS13C-201ENST00000249837 C9orf92A6NGG3 77 aa2.79□□□□□ -1.96
VPS13C-201ENST00000249837 PKD1L1Q8TDX9 2849 aa2.79□□□□□ -1.96
VPS13C-201ENST00000249837 ASPMQ8IZT6 3477 aa2.79□□□□□ -1.96
VPS13C-201ENST00000249837 TENM2Q9NT68 2774 aa2.78□□□□□ -1.96
VPS13C-201ENST00000249837 LCA10Q71F78 164 aa2.78□□□□□ -1.96
VPS13C-201ENST00000249837 LINC01558Q9Y6Z2 57 aa2.78□□□□□ -1.96
VPS13C-201ENST00000249837 UQCR11O14957 56 aa2.78□□□□□ -1.96
VPS13C-201ENST00000249837 CDC42SE1Q9NRR8 79 aa2.77□□□□□ -1.97
VPS13C-201ENST00000249837 A0A087X002 238 aa2.77□□□□□ -1.97
VPS13C-201ENST00000249837 NOTCH2NLQ7Z3S9 236 aa2.77□□□□□ -1.97
VPS13C-201ENST00000249837 LINC00304Q8N9R0 145 aa2.77□□□□□ -1.97
VPS13C-201ENST00000249837 PRAC1Q96KF2 57 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms