RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 KRTAP1-3Q8IUG1 177 aa11.82□□□□□ -0.52
PTPN12-201ENST00000248594 SRRM2Q9UQ35 2752 aaKnown RBP11.81□□□□□ -0.52
PTPN12-201ENST00000248594 C8orf87E5RJ46 101 aa11.8□□□□□ -0.52
PTPN12-201ENST00000248594 LCE6AA0A183 80 aa11.79□□□□□ -0.52
PTPN12-201ENST00000248594 KRTAP10-3P60369 221 aa11.79□□□□□ -0.52
PTPN12-201ENST00000248594 LINC00476Q8WZB0 136 aa11.79□□□□□ -0.52
PTPN12-201ENST00000248594 COA5Q86WW8 74 aa11.78□□□□□ -0.52
PTPN12-201ENST00000248594 PRR34Q9NV39 138 aa11.78□□□□□ -0.52
PTPN12-201ENST00000248594 ATP11AUNQ6ZP68 121 aa11.77□□□□□ -0.52
PTPN12-201ENST00000248594 CASC2Q6XLA1 102 aa11.77□□□□□ -0.53
PTPN12-201ENST00000248594 Q6ZRX8 168 aa11.76□□□□□ -0.53
PTPN12-201ENST00000248594 PRAC1Q96KF2 57 aa11.76□□□□□ -0.53
PTPN12-201ENST00000248594 H0Y9J4 135 aa11.76□□□□□ -0.53
PTPN12-201ENST00000248594 C15orf56Q8N910 161 aa11.76□□□□□ -0.53
PTPN12-201ENST00000248594 DHRS4-AS1Q9P1J3 65 aa11.76□□□□□ -0.53
PTPN12-201ENST00000248594 SPART-AS1P0CW21 52 aa11.75□□□□□ -0.53
PTPN12-201ENST00000248594 ANK3Q12955 4377 aaKnown RBP11.74□□□□□ -0.53
PTPN12-201ENST00000248594 NDUFS5O43920 106 aa11.74□□□□□ -0.53
PTPN12-201ENST00000248594 TENM2Q9NT68 2774 aa11.74□□□□□ -0.53
PTPN12-201ENST00000248594 KCNQ1DNQ9H478 68 aa11.73□□□□□ -0.53
PTPN12-201ENST00000248594 PRLHP81277 87 aa11.71□□□□□ -0.53
PTPN12-201ENST00000248594 COL7A1Q02388 2944 aa11.71□□□□□ -0.54
PTPN12-201ENST00000248594 IGFL1Q6UW32 110 aa11.69□□□□□ -0.54
PTPN12-201ENST00000248594 A6NN06 94 aa11.68□□□□□ -0.54
PTPN12-201ENST00000248594 MOBPQ13875 183 aa11.68□□□□□ -0.54
PTPN12-201ENST00000248594 C7orf65Q6ZTY9 151 aa11.68□□□□□ -0.54
PTPN12-201ENST00000248594 MDFIQ99750 246 aa11.68□□□□□ -0.54
PTPN12-201ENST00000248594 LOC101927531A0A1B0GV80 90 aa11.68□□□□□ -0.54
PTPN12-201ENST00000248594 SPINK7P58062 85 aa11.68□□□□□ -0.54
PTPN12-201ENST00000248594 SPRR4Q96PI1 79 aa11.66□□□□□ -0.54
PTPN12-201ENST00000248594 IGKV2-24A0A0C4DH68 120 aa11.66□□□□□ -0.54
PTPN12-201ENST00000248594 INAFM1C9JVW0 142 aa11.64□□□□□ -0.55
PTPN12-201ENST00000248594 Q75L30 129 aa11.64□□□□□ -0.55
PTPN12-201ENST00000248594 TNP2Q05952 138 aa11.64□□□□□ -0.55
PTPN12-201ENST00000248594 CDC42SE1Q9NRR8 79 aa11.63□□□□□ -0.55
PTPN12-201ENST00000248594 OXLD1Q5BKU9 147 aa11.63□□□□□ -0.55
PTPN12-201ENST00000248594 KRTAP1-1Q07627 177 aa11.6□□□□□ -0.55
PTPN12-201ENST00000248594 ADM2Q7Z4H4 148 aa11.6□□□□□ -0.55
PTPN12-201ENST00000248594 Q8NAQ8 132 aa11.6□□□□□ -0.55
PTPN12-201ENST00000248594 IGLV1-50A0A075B6I6 118 aa11.59□□□□□ -0.55
PTPN12-201ENST00000248594 CASC10Q5T4H9 136 aa11.57□□□□□ -0.56
PTPN12-201ENST00000248594 PHF5AQ7RTV0 110 aaKnown RBP11.57□□□□□ -0.56
PTPN12-201ENST00000248594 CNBPP62633 177 aaKnown RBP11.56□□□□□ -0.56
PTPN12-201ENST00000248594 SPANXA2-OT1Q8N9U9 137 aa11.56□□□□□ -0.56
PTPN12-201ENST00000248594 A0A1B0GW54 56 aa11.55□□□□□ -0.56
PTPN12-201ENST00000248594 STAB2Q8WWQ8 2551 aa11.55□□□□□ -0.56
PTPN12-201ENST00000248594 LINC00313P59037 77 aa11.54□□□□□ -0.56
PTPN12-201ENST00000248594 KRTAP26-1Q6PEX3 210 aa11.54□□□□□ -0.56
PTPN12-201ENST00000248594 REG3GQ6UW15 175 aa11.54□□□□□ -0.56
PTPN12-201ENST00000248594 PRR26Q8N8Z3 221 aa11.53□□□□□ -0.56
PTPN12-201ENST00000248594 KRTAP29-1A8MX34 341 aaPredicted RBP11.5□□□□□ -0.57
PTPN12-201ENST00000248594 KRTAP4-16G5E9R7 235 aaPredicted RBP11.49□□□□□ -0.57
PTPN12-201ENST00000248594 C9orf163Q8N9P6 203 aa11.48□□□□□ -0.57
PTPN12-201ENST00000248594 ANK2Q01484 3957 aa11.47□□□□□ -0.57
PTPN12-201ENST00000248594 KRTAP7-1Q8IUC3 87 aa11.46□□□□□ -0.57
PTPN12-201ENST00000248594 IGLV7-46A0A075B6I9 117 aa11.45□□□□□ -0.58
PTPN12-201ENST00000248594 A8MWP4 228 aa11.44□□□□□ -0.58
PTPN12-201ENST00000248594 H3BPC8 53 aa11.42□□□□□ -0.58
PTPN12-201ENST00000248594 LINC01558Q9Y6Z2 57 aa11.41□□□□□ -0.58
PTPN12-201ENST00000248594 IGHV6-1A0A0B4J1U7 121 aa11.41□□□□□ -0.58
PTPN12-201ENST00000248594 SPRR1AP35321 89 aa11.41□□□□□ -0.58
PTPN12-201ENST00000248594 HRES1P13985 223 aa11.4□□□□□ -0.58
PTPN12-201ENST00000248594 IGLV9-49A0A0B4J1Y8 123 aa11.38□□□□□ -0.59
PTPN12-201ENST00000248594 DEFB131BA0A096LNP1 70 aa11.38□□□□□ -0.59
PTPN12-201ENST00000248594 LINC01554Q52M75 96 aa11.35□□□□□ -0.59
PTPN12-201ENST00000248594 MMP24-AS1A0A0U1RRL7 71 aa11.34□□□□□ -0.59
PTPN12-201ENST00000248594 CHTF8P0CG12 524 aa11.32□□□□□ -0.6
PTPN12-201ENST00000248594 IGLV5-37A0A075B6J1 123 aa11.32□□□□□ -0.6
PTPN12-201ENST00000248594 K7EIL1 84 aa11.32□□□□□ -0.6
PTPN12-201ENST00000248594 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
PTPN12-201ENST00000248594 LYSTQ99698 3801 aa11.31□□□□□ -0.6
PTPN12-201ENST00000248594 LINC00472Q9H8W2 130 aa11.3□□□□□ -0.6
PTPN12-201ENST00000248594 CDK2AP2O75956 126 aa11.29□□□□□ -0.6
PTPN12-201ENST00000248594 RETNLBQ9BQ08 111 aa11.29□□□□□ -0.6
PTPN12-201ENST00000248594 SPINK6Q6UWN8 80 aa11.29□□□□□ -0.6
PTPN12-201ENST00000248594 KRTAP10-11P60412 298 aa11.27□□□□□ -0.61
PTPN12-201ENST00000248594 IGLV8-61A0A075B6I0 122 aa11.26□□□□□ -0.61
PTPN12-201ENST00000248594 PLA2G2DQ9UNK4 145 aa11.24□□□□□ -0.61
PTPN12-201ENST00000248594 TLX1NBP0CAT3 122 aa11.24□□□□□ -0.61
PTPN12-201ENST00000248594 DNAH10Q8IVF4 4471 aa11.23□□□□□ -0.61
PTPN12-201ENST00000248594 KRTAP11-1Q8IUC1 163 aa11.21□□□□□ -0.62
PTPN12-201ENST00000248594 C8orf17Q9NRJ1 99 aa11.21□□□□□ -0.62
PTPN12-201ENST00000248594 FLG2Q5D862 2391 aaPredicted RBP11.19□□□□□ -0.62
PTPN12-201ENST00000248594 A0A1B0GU69 56 aa11.18□□□□□ -0.62
PTPN12-201ENST00000248594 CSAG1Q6PB30 78 aa11.18□□□□□ -0.62
PTPN12-201ENST00000248594 A0A087X002 238 aa11.17□□□□□ -0.62
PTPN12-201ENST00000248594 NOTCH2NLQ7Z3S9 236 aa11.17□□□□□ -0.62
PTPN12-201ENST00000248594 PLAC8Q9NZF1 115 aa11.16□□□□□ -0.62
PTPN12-201ENST00000248594 TP53AIP1Q9HCN2 124 aa11.16□□□□□ -0.62
PTPN12-201ENST00000248594 ANAPC11Q9NYG5 84 aa11.14□□□□□ -0.63
PTPN12-201ENST00000248594 ZNF706Q9Y5V0 76 aaPredicted RBP11.12□□□□□ -0.63
PTPN12-201ENST00000248594 DNAH10OSP0CZ25 163 aa11.11□□□□□ -0.63
PTPN12-201ENST00000248594 MRPL34Q9BQ48 92 aaKnown RBP11.09□□□□□ -0.63
PTPN12-201ENST00000248594 H3BNG1 76 aa11.08□□□□□ -0.64
PTPN12-201ENST00000248594 ACYP2P14621 99 aa11.06□□□□□ -0.64
PTPN12-201ENST00000248594 MIR22HGQ0VDD5 57 aa11.06□□□□□ -0.64
PTPN12-201ENST00000248594 Q5W150 140 aa11.06□□□□□ -0.64
PTPN12-201ENST00000248594 PLA2G1BP04054 148 aaKnown RBP11.05□□□□□ -0.64
PTPN12-201ENST00000248594 A0A1B0GVX0 72 aa11.04□□□□□ -0.64
PTPN12-201ENST00000248594 Q6ZR54 194 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms