RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 IGLV9-49A0A0B4J1Y8 123 aa7.96□□□□□ -1.14
RAB3IP-201ENST00000247833 Q5XG85 94 aa7.96□□□□□ -1.14
RAB3IP-201ENST00000247833 B9D2Q9BPU9 175 aa7.96□□□□□ -1.14
RAB3IP-201ENST00000247833 ANK2Q01484 3957 aa7.96□□□□□ -1.14
RAB3IP-201ENST00000247833 TNP2Q05952 138 aa7.96□□□□□ -1.14
RAB3IP-201ENST00000247833 A0A0U1RQV1 116 aa7.94□□□□□ -1.14
RAB3IP-201ENST00000247833 MP68P56378 58 aa7.94□□□□□ -1.14
RAB3IP-201ENST00000247833 ATP5EP56381 51 aaPredicted RBP7.94□□□□□ -1.14
RAB3IP-201ENST00000247833 SPRR4Q96PI1 79 aa7.93□□□□□ -1.14
RAB3IP-201ENST00000247833 LINC00208Q96KT6 92 aa7.93□□□□□ -1.14
RAB3IP-201ENST00000247833 A0A1B0GW54 56 aa7.92□□□□□ -1.14
RAB3IP-201ENST00000247833 BRK1Q8WUW1 75 aa7.92□□□□□ -1.14
RAB3IP-201ENST00000247833 MDFIQ99750 246 aa7.91□□□□□ -1.14
RAB3IP-201ENST00000247833 KRTAP11-1Q8IUC1 163 aa7.9□□□□□ -1.14
RAB3IP-201ENST00000247833 CNBPP62633 177 aaKnown RBP7.9□□□□□ -1.15
RAB3IP-201ENST00000247833 APLNQ9ULZ1 77 aa7.89□□□□□ -1.15
RAB3IP-201ENST00000247833 CASC2Q6XLA1 102 aa7.89□□□□□ -1.15
RAB3IP-201ENST00000247833 NBDYA0A0U1RRE5 68 aa7.88□□□□□ -1.15
RAB3IP-201ENST00000247833 FAM229BQ4G0N7 80 aa7.88□□□□□ -1.15
RAB3IP-201ENST00000247833 NDUFS5O43920 106 aa7.88□□□□□ -1.15
RAB3IP-201ENST00000247833 FP248Q71RG6 208 aaPredicted RBP7.88□□□□□ -1.15
RAB3IP-201ENST00000247833 LINC00336Q6ZUF6 198 aa7.87□□□□□ -1.15
RAB3IP-201ENST00000247833 NDUFB1O75438 58 aa7.86□□□□□ -1.15
RAB3IP-201ENST00000247833 C9orf163Q8N9P6 203 aa7.86□□□□□ -1.15
RAB3IP-201ENST00000247833 PANO1I0J062 215 aa7.85□□□□□ -1.15
RAB3IP-201ENST00000247833 CDK2AP2O75956 126 aa7.84□□□□□ -1.15
RAB3IP-201ENST00000247833 H0Y9P7 68 aa7.83□□□□□ -1.16
RAB3IP-201ENST00000247833 COL7A1Q02388 2944 aa7.83□□□□□ -1.16
RAB3IP-201ENST00000247833 PKIGQ9Y2B9 76 aa7.83□□□□□ -1.16
RAB3IP-201ENST00000247833 ANAPC11Q9NYG5 84 aa7.82□□□□□ -1.16
RAB3IP-201ENST00000247833 NUPR2A6NF83 97 aa7.82□□□□□ -1.16
RAB3IP-201ENST00000247833 C1orf64Q8NEQ6 169 aa7.81□□□□□ -1.16
RAB3IP-201ENST00000247833 SPINK6Q6UWN8 80 aa7.81□□□□□ -1.16
RAB3IP-201ENST00000247833 PSPHP1O15172 72 aa7.8□□□□□ -1.16
RAB3IP-201ENST00000247833 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.8□□□□□ -1.16
RAB3IP-201ENST00000247833 PRR15Q8IV56 129 aa7.79□□□□□ -1.16
RAB3IP-201ENST00000247833 IGHV6-1A0A0B4J1U7 121 aa7.78□□□□□ -1.16
RAB3IP-201ENST00000247833 PCOTHQ58A44 107 aa7.78□□□□□ -1.16
RAB3IP-201ENST00000247833 A8MWP4 228 aa7.77□□□□□ -1.16
RAB3IP-201ENST00000247833 MOBPQ13875 183 aa7.77□□□□□ -1.16
RAB3IP-201ENST00000247833 TGP01266 2768 aa7.77□□□□□ -1.17
RAB3IP-201ENST00000247833 HUWE1Q7Z6Z7 4374 aaKnown RBP7.76□□□□□ -1.17
RAB3IP-201ENST00000247833 DNAH10Q8IVF4 4471 aa7.75□□□□□ -1.17
RAB3IP-201ENST00000247833 IGLV8-61A0A075B6I0 122 aa7.75□□□□□ -1.17
RAB3IP-201ENST00000247833 hDV103S1A0JD37 113 aa7.74□□□□□ -1.17
RAB3IP-201ENST00000247833 RTL8CO15255 209 aa7.74□□□□□ -1.17
RAB3IP-201ENST00000247833 PRO0628Q9UI54 55 aa7.74□□□□□ -1.17
RAB3IP-201ENST00000247833 A0A087WTM6 91 aa7.73□□□□□ -1.17
RAB3IP-201ENST00000247833 TRAV22A0A0B4J277 110 aa7.72□□□□□ -1.17
RAB3IP-201ENST00000247833 LY6G6CO95867 125 aa7.72□□□□□ -1.17
RAB3IP-201ENST00000247833 IGLV5-52A0A0A0MRZ9 124 aa7.71□□□□□ -1.17
RAB3IP-201ENST00000247833 LINC00472Q9H8W2 130 aa7.71□□□□□ -1.17
RAB3IP-201ENST00000247833 PSORS1C2Q9UIG4 136 aa7.71□□□□□ -1.17
RAB3IP-201ENST00000247833 CIRBP-AS1Q8TBR5 109 aa7.71□□□□□ -1.18
RAB3IP-201ENST00000247833 LYSTQ99698 3801 aa7.7□□□□□ -1.18
RAB3IP-201ENST00000247833 SPRR1BP22528 89 aa7.7□□□□□ -1.18
RAB3IP-201ENST00000247833 ZCCHC13Q8WW36 166 aaKnown RBP7.69□□□□□ -1.18
RAB3IP-201ENST00000247833 ZNF706Q9Y5V0 76 aaPredicted RBP7.69□□□□□ -1.18
RAB3IP-201ENST00000247833 SPACA4Q8TDM5 124 aa7.68□□□□□ -1.18
RAB3IP-201ENST00000247833 CMYA5Q8N3K9 4069 aa7.68□□□□□ -1.18
RAB3IP-201ENST00000247833 LCE6AA0A183 80 aa7.67□□□□□ -1.18
RAB3IP-201ENST00000247833 KRTAP29-1A8MX34 341 aaPredicted RBP7.67□□□□□ -1.18
RAB3IP-201ENST00000247833 Q6ZRN7 208 aaPredicted RBP7.66□□□□□ -1.18
RAB3IP-201ENST00000247833 MMP24-AS1A0A0U1RRL7 71 aa7.65□□□□□ -1.18
RAB3IP-201ENST00000247833 A8MUN3 132 aa7.65□□□□□ -1.18
RAB3IP-201ENST00000247833 C1orf134Q5TEV5 83 aa7.65□□□□□ -1.18
RAB3IP-201ENST00000247833 C8orf17Q9NRJ1 99 aa7.64□□□□□ -1.19
RAB3IP-201ENST00000247833 ZNF861PO60384 105 aa7.62□□□□□ -1.19
RAB3IP-201ENST00000247833 PRR15LQ9BU68 103 aa7.62□□□□□ -1.19
RAB3IP-201ENST00000247833 RETNLBQ9BQ08 111 aa7.61□□□□□ -1.19
RAB3IP-201ENST00000247833 CHKB-CPT1BH3BT56 60 aa7.61□□□□□ -1.19
RAB3IP-201ENST00000247833 CYP4F30PQ9H0H9 118 aa7.6□□□□□ -1.19
RAB3IP-201ENST00000247833 H3BPC8 53 aa7.6□□□□□ -1.19
RAB3IP-201ENST00000247833 KRTAP13-1Q8IUC0 172 aa7.6□□□□□ -1.19
RAB3IP-201ENST00000247833 A0A1B0GVX0 72 aa7.59□□□□□ -1.19
RAB3IP-201ENST00000247833 WWC2-AS2Q96NR7 200 aa7.58□□□□□ -1.2
RAB3IP-201ENST00000247833 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
RAB3IP-201ENST00000247833 COA5Q86WW8 74 aa7.57□□□□□ -1.2
RAB3IP-201ENST00000247833 DNAH3Q8TD57 4116 aa7.57□□□□□ -1.2
RAB3IP-201ENST00000247833 DNAH9Q9NYC9 4486 aa7.57□□□□□ -1.2
RAB3IP-201ENST00000247833 MRPL34Q9BQ48 92 aaKnown RBP7.57□□□□□ -1.2
RAB3IP-201ENST00000247833 V9GYY9 64 aa7.57□□□□□ -1.2
RAB3IP-201ENST00000247833 SPTSSBQ8NFR3 76 aa7.56□□□□□ -1.2
RAB3IP-201ENST00000247833 TP53AIP1Q9HCN2 124 aa7.56□□□□□ -1.2
RAB3IP-201ENST00000247833 A0A087X002 238 aa7.56□□□□□ -1.2
RAB3IP-201ENST00000247833 NOTCH2NLQ7Z3S9 236 aa7.56□□□□□ -1.2
RAB3IP-201ENST00000247833 Q1T7F1 81 aa7.55□□□□□ -1.2
RAB3IP-201ENST00000247833 SPAG11AQ6PDA7 123 aa7.55□□□□□ -1.2
RAB3IP-201ENST00000247833 FBN3Q75N90 2809 aa7.55□□□□□ -1.2
RAB3IP-201ENST00000247833 MEGF8Q7Z7M0 2845 aa7.54□□□□□ -1.2
RAB3IP-201ENST00000247833 Q96NJ1 140 aa7.54□□□□□ -1.2
RAB3IP-201ENST00000247833 A6NED7 52 aa7.53□□□□□ -1.2
RAB3IP-201ENST00000247833 IGLV7-43P04211 117 aa7.53□□□□□ -1.2
RAB3IP-201ENST00000247833 SPANXA2-OT1Q8N9U9 137 aa7.53□□□□□ -1.2
RAB3IP-201ENST00000247833 PLAC8Q9NZF1 115 aa7.53□□□□□ -1.2
RAB3IP-201ENST00000247833 CD164Q04900 197 aa7.52□□□□□ -1.21
RAB3IP-201ENST00000247833 PLECQ15149 4684 aaKnown RBP7.52□□□□□ -1.21
RAB3IP-201ENST00000247833 LINC00483Q53H64 154 aa7.5□□□□□ -1.21
RAB3IP-201ENST00000247833 DNAH1Q9P2D7 4330 aa7.5□□□□□ -1.21
RAB3IP-201ENST00000247833 LIMD2Q9BT23 127 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms