RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 SPRR4Q96PI1 79 aa11.79□□□□□ -0.52
CHPF-201ENST00000243776 IGFL1Q6UW32 110 aa11.78□□□□□ -0.52
CHPF-201ENST00000243776 F8WDY8 70 aa11.77□□□□□ -0.52
CHPF-201ENST00000243776 PLA2G2DQ9UNK4 145 aa11.77□□□□□ -0.52
CHPF-201ENST00000243776 A0A096LNI7 61 aa11.77□□□□□ -0.53
CHPF-201ENST00000243776 DNAH1Q9P2D7 4330 aa11.77□□□□□ -0.53
CHPF-201ENST00000243776 HCG22E2RYF7 251 aa11.76□□□□□ -0.53
CHPF-201ENST00000243776 hDV103S1A0JD37 113 aa11.75□□□□□ -0.53
CHPF-201ENST00000243776 PSPHP1O15172 72 aa11.74□□□□□ -0.53
CHPF-201ENST00000243776 IGLV5-37A0A075B6J1 123 aa11.73□□□□□ -0.53
CHPF-201ENST00000243776 CHTF8P0CG12 524 aa11.7□□□□□ -0.54
CHPF-201ENST00000243776 ZCCHC13Q8WW36 166 aaKnown RBP11.7□□□□□ -0.54
CHPF-201ENST00000243776 LCE6AA0A183 80 aa11.69□□□□□ -0.54
CHPF-201ENST00000243776 KRTAP24-1Q3LI83 254 aa11.69□□□□□ -0.54
CHPF-201ENST00000243776 LINC00208Q96KT6 92 aa11.69□□□□□ -0.54
CHPF-201ENST00000243776 A0A1B0GW54 56 aa11.68□□□□□ -0.54
CHPF-201ENST00000243776 KRTAP11-1Q8IUC1 163 aa11.68□□□□□ -0.54
CHPF-201ENST00000243776 HUWE1Q7Z6Z7 4374 aaKnown RBP11.67□□□□□ -0.54
CHPF-201ENST00000243776 UBE2AP49459 152 aa11.67□□□□□ -0.54
CHPF-201ENST00000243776 DNAH9Q9NYC9 4486 aa11.67□□□□□ -0.54
CHPF-201ENST00000243776 KRTAP1-5Q9BYS1 174 aa11.66□□□□□ -0.54
CHPF-201ENST00000243776 PHF5AQ7RTV0 110 aaKnown RBP11.65□□□□□ -0.54
CHPF-201ENST00000243776 DNAH3Q8TD57 4116 aa11.62□□□□□ -0.55
CHPF-201ENST00000243776 MP68P56378 58 aa11.6□□□□□ -0.55
CHPF-201ENST00000243776 C1orf195Q5TG92 126 aa11.59□□□□□ -0.55
CHPF-201ENST00000243776 TRAV22A0A0B4J277 110 aa11.58□□□□□ -0.56
CHPF-201ENST00000243776 CASC2Q6XLA1 102 aa11.57□□□□□ -0.56
CHPF-201ENST00000243776 DNAH7Q8WXX0 4024 aa11.56□□□□□ -0.56
CHPF-201ENST00000243776 C16orf90A8MZG2 172 aa11.56□□□□□ -0.56
CHPF-201ENST00000243776 A8MUN3 132 aa11.56□□□□□ -0.56
CHPF-201ENST00000243776 H0Y9P7 68 aa11.56□□□□□ -0.56
CHPF-201ENST00000243776 A8MU10 97 aa11.55□□□□□ -0.56
CHPF-201ENST00000243776 H0Y9J4 135 aa11.54□□□□□ -0.56
CHPF-201ENST00000243776 CNBPP62633 177 aaKnown RBP11.54□□□□□ -0.56
CHPF-201ENST00000243776 Q1T7F1 81 aa11.52□□□□□ -0.56
CHPF-201ENST00000243776 B9D2Q9BPU9 175 aa11.51□□□□□ -0.57
CHPF-201ENST00000243776 KRTAP29-1A8MX34 341 aaPredicted RBP11.51□□□□□ -0.57
CHPF-201ENST00000243776 UBE2DNLQ8IWF7 75 aa11.5□□□□□ -0.57
CHPF-201ENST00000243776 K7EIL1 84 aa11.49□□□□□ -0.57
CHPF-201ENST00000243776 PRR15Q8IV56 129 aa11.49□□□□□ -0.57
CHPF-201ENST00000243776 CYP4F30PQ9H0H9 118 aa11.49□□□□□ -0.57
CHPF-201ENST00000243776 NDUFB1O75438 58 aa11.47□□□□□ -0.57
CHPF-201ENST00000243776 IGLV8-61A0A075B6I0 122 aa11.47□□□□□ -0.57
CHPF-201ENST00000243776 PANO1I0J062 215 aa11.46□□□□□ -0.57
CHPF-201ENST00000243776 IGLV9-49A0A0B4J1Y8 123 aa11.46□□□□□ -0.57
CHPF-201ENST00000243776 PCOTHQ58A44 107 aa11.44□□□□□ -0.58
CHPF-201ENST00000243776 LINC00472Q9H8W2 130 aa11.44□□□□□ -0.58
CHPF-201ENST00000243776 A8MWP4 228 aa11.44□□□□□ -0.58
CHPF-201ENST00000243776 V9GYY9 64 aa11.39□□□□□ -0.59
CHPF-201ENST00000243776 PLECQ15149 4684 aaKnown RBP11.38□□□□□ -0.59
CHPF-201ENST00000243776 PRR15LQ9BU68 103 aa11.37□□□□□ -0.59
CHPF-201ENST00000243776 CHKB-CPT1BH3BT56 60 aa11.37□□□□□ -0.59
CHPF-201ENST00000243776 Q5VV11 94 aa11.37□□□□□ -0.59
CHPF-201ENST00000243776 MMP24-AS1A0A0U1RRL7 71 aa11.36□□□□□ -0.59
CHPF-201ENST00000243776 ANAPC11Q9NYG5 84 aa11.36□□□□□ -0.59
CHPF-201ENST00000243776 NDUFS5O43920 106 aa11.35□□□□□ -0.59
CHPF-201ENST00000243776 Q8N9P0 234 aaPredicted RBP11.34□□□□□ -0.59
CHPF-201ENST00000243776 FRAS1Q86XX4 4008 aa11.32□□□□□ -0.6
CHPF-201ENST00000243776 SPRR1BP22528 89 aa11.31□□□□□ -0.6
CHPF-201ENST00000243776 IGHV6-1A0A0B4J1U7 121 aa11.31□□□□□ -0.6
CHPF-201ENST00000243776 C9orf163Q8N9P6 203 aa11.31□□□□□ -0.6
CHPF-201ENST00000243776 COA5Q86WW8 74 aa11.3□□□□□ -0.6
CHPF-201ENST00000243776 SPTSSBQ8NFR3 76 aa11.29□□□□□ -0.6
CHPF-201ENST00000243776 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.29□□□□□ -0.6
CHPF-201ENST00000243776 SPANXA2-OT1Q8N9U9 137 aa11.28□□□□□ -0.6
CHPF-201ENST00000243776 APLNQ9ULZ1 77 aa11.28□□□□□ -0.6
CHPF-201ENST00000243776 PMAIP1Q13794 54 aa11.27□□□□□ -0.6
CHPF-201ENST00000243776 TGP01266 2768 aa11.26□□□□□ -0.61
CHPF-201ENST00000243776 CD164Q04900 197 aa11.26□□□□□ -0.61
CHPF-201ENST00000243776 MOBPQ13875 183 aa11.26□□□□□ -0.61
CHPF-201ENST00000243776 C14orf177Q52M58 125 aa11.26□□□□□ -0.61
CHPF-201ENST00000243776 Q96NJ1 140 aa11.25□□□□□ -0.61
CHPF-201ENST00000243776 H3BPC8 53 aa11.24□□□□□ -0.61
CHPF-201ENST00000243776 A0A087X002 238 aa11.24□□□□□ -0.61
CHPF-201ENST00000243776 SPAG11AQ6PDA7 123 aa11.24□□□□□ -0.61
CHPF-201ENST00000243776 NOTCH2NLQ7Z3S9 236 aa11.24□□□□□ -0.61
CHPF-201ENST00000243776 SEC61GP60059 68 aa11.23□□□□□ -0.61
CHPF-201ENST00000243776 KRTAP13-1Q8IUC0 172 aa11.21□□□□□ -0.62
CHPF-201ENST00000243776 C8orf17Q9NRJ1 99 aa11.21□□□□□ -0.62
CHPF-201ENST00000243776 A6NED7 52 aa11.2□□□□□ -0.62
CHPF-201ENST00000243776 LIMD2Q9BT23 127 aa11.2□□□□□ -0.62
CHPF-201ENST00000243776 SPINK6Q6UWN8 80 aa11.2□□□□□ -0.62
CHPF-201ENST00000243776 IGLV7-46A0A075B6I9 117 aa11.19□□□□□ -0.62
CHPF-201ENST00000243776 NBDYA0A0U1RRE5 68 aa11.18□□□□□ -0.62
CHPF-201ENST00000243776 DNAH8Q96JB1 4490 aa11.18□□□□□ -0.62
CHPF-201ENST00000243776 MDFIQ99750 246 aa11.17□□□□□ -0.62
CHPF-201ENST00000243776 LCA10Q71F78 164 aa11.17□□□□□ -0.62
CHPF-201ENST00000243776 CDK2AP2O75956 126 aa11.15□□□□□ -0.62
CHPF-201ENST00000243776 HECTD4Q9Y4D8 3996 aa11.15□□□□□ -0.62
CHPF-201ENST00000243776 STARD9Q9P2P6 4700 aa11.12□□□□□ -0.63
CHPF-201ENST00000243776 A0A1B0GVX0 72 aa11.12□□□□□ -0.63
CHPF-201ENST00000243776 PSORS1C2Q9UIG4 136 aa11.12□□□□□ -0.63
CHPF-201ENST00000243776 Q6ZRN7 208 aaPredicted RBP11.11□□□□□ -0.63
CHPF-201ENST00000243776 SPACA4Q8TDM5 124 aa11.11□□□□□ -0.63
CHPF-201ENST00000243776 KMT2AQ03164 3969 aa11.11□□□□□ -0.63
CHPF-201ENST00000243776 MEGF8Q7Z7M0 2845 aa11.1□□□□□ -0.63
CHPF-201ENST00000243776 WWC2-AS2Q96NR7 200 aa11.09□□□□□ -0.63
CHPF-201ENST00000243776 TP53AIP1Q9HCN2 124 aa11.09□□□□□ -0.63
CHPF-201ENST00000243776 DYNC2H1Q8NCM8 4307 aaKnown RBP11.08□□□□□ -0.64
CHPF-201ENST00000243776 HRES1P13985 223 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms