RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 NBDYA0A0U1RRE5 68 aa4.84□□□□□ -1.63
RIF1-201ENST00000243326 COL12A1Q99715 3063 aa4.84□□□□□ -1.64
RIF1-201ENST00000243326 CYP4F30PQ9H0H9 118 aa4.83□□□□□ -1.64
RIF1-201ENST00000243326 UQCR11O14957 56 aa4.83□□□□□ -1.64
RIF1-201ENST00000243326 H3BPC8 53 aa4.82□□□□□ -1.64
RIF1-201ENST00000243326 IGLV5-48A0A075B6I7 105 aa4.82□□□□□ -1.64
RIF1-201ENST00000243326 FP248Q71RG6 208 aaPredicted RBP4.82□□□□□ -1.64
RIF1-201ENST00000243326 C9orf163Q8N9P6 203 aa4.81□□□□□ -1.64
RIF1-201ENST00000243326 MGAQ8IWI9 3026 aa4.81□□□□□ -1.64
RIF1-201ENST00000243326 A0A096LNT2 108 aa4.81□□□□□ -1.64
RIF1-201ENST00000243326 TENM3Q9P273 2699 aa4.81□□□□□ -1.64
RIF1-201ENST00000243326 OCR1Q9BZK8 76 aa4.81□□□□□ -1.64
RIF1-201ENST00000243326 C5orf42Q9H799 3197 aa4.81□□□□□ -1.64
RIF1-201ENST00000243326 C19orf73Q9NVV2 129 aa4.79□□□□□ -1.64
RIF1-201ENST00000243326 SPINK7P58062 85 aa4.79□□□□□ -1.64
RIF1-201ENST00000243326 ADGRG4Q8IZF6 3080 aa4.78□□□□□ -1.64
RIF1-201ENST00000243326 FAM229AH3BQW9 127 aa4.77□□□□□ -1.65
RIF1-201ENST00000243326 CSAG1Q6PB30 78 aa4.76□□□□□ -1.65
RIF1-201ENST00000243326 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
RIF1-201ENST00000243326 SRRM2Q9UQ35 2752 aaKnown RBP4.76□□□□□ -1.65
RIF1-201ENST00000243326 CNBPP62633 177 aaKnown RBP4.76□□□□□ -1.65
RIF1-201ENST00000243326 K7EIL1 84 aa4.75□□□□□ -1.65
RIF1-201ENST00000243326 Q8N9P0 234 aaPredicted RBP4.75□□□□□ -1.65
RIF1-201ENST00000243326 PSORS1C2Q9UIG4 136 aa4.75□□□□□ -1.65
RIF1-201ENST00000243326 PRR34Q9NV39 138 aa4.75□□□□□ -1.65
RIF1-201ENST00000243326 H3BNG1 76 aa4.74□□□□□ -1.65
RIF1-201ENST00000243326 Q1T7F1 81 aa4.74□□□□□ -1.65
RIF1-201ENST00000243326 A0A1B0GW54 56 aa4.73□□□□□ -1.65
RIF1-201ENST00000243326 Q5VV11 94 aa4.73□□□□□ -1.65
RIF1-201ENST00000243326 SPRR4Q96PI1 79 aa4.73□□□□□ -1.65
RIF1-201ENST00000243326 ZNF861PO60384 105 aa4.73□□□□□ -1.65
RIF1-201ENST00000243326 HRES1P13985 223 aa4.72□□□□□ -1.65
RIF1-201ENST00000243326 TENM1Q9UKZ4 2725 aa4.72□□□□□ -1.65
RIF1-201ENST00000243326 KLK9Q2XQG4 91 aa4.72□□□□□ -1.65
RIF1-201ENST00000243326 LAMA1P25391 3075 aa4.71□□□□□ -1.65
RIF1-201ENST00000243326 LINC00304Q8N9R0 145 aa4.71□□□□□ -1.66
RIF1-201ENST00000243326 IGLV5-37A0A075B6J1 123 aa4.71□□□□□ -1.66
RIF1-201ENST00000243326 IGLV7-43P04211 117 aa4.7□□□□□ -1.66
RIF1-201ENST00000243326 A0A087WTM6 91 aa4.7□□□□□ -1.66
RIF1-201ENST00000243326 LINC00612Q8N6U2 182 aa4.7□□□□□ -1.66
RIF1-201ENST00000243326 DMXL1Q9Y485 3027 aa4.69□□□□□ -1.66
RIF1-201ENST00000243326 VPS13AQ96RL7 3174 aa4.69□□□□□ -1.66
RIF1-201ENST00000243326 PCNTO95613 3336 aa4.69□□□□□ -1.66
RIF1-201ENST00000243326 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.69□□□□□ -1.66
RIF1-201ENST00000243326 VWFP04275 2813 aa4.68□□□□□ -1.66
RIF1-201ENST00000243326 TNRC18O15417 2968 aaPredicted RBP4.68□□□□□ -1.66
RIF1-201ENST00000243326 A8MU10 97 aa4.67□□□□□ -1.66
RIF1-201ENST00000243326 Q75L30 129 aa4.67□□□□□ -1.66
RIF1-201ENST00000243326 MMP24-AS1A0A0U1RRL7 71 aa4.67□□□□□ -1.66
RIF1-201ENST00000243326 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
RIF1-201ENST00000243326 PKD1L1Q8TDX9 2849 aa4.67□□□□□ -1.66
RIF1-201ENST00000243326 PLA2G2DQ9UNK4 145 aa4.66□□□□□ -1.66
RIF1-201ENST00000243326 COX6B2Q6YFQ2 88 aa4.66□□□□□ -1.66
RIF1-201ENST00000243326 HTTP42858 3142 aa4.66□□□□□ -1.66
RIF1-201ENST00000243326 TLX1NBP0CAT3 122 aa4.65□□□□□ -1.66
RIF1-201ENST00000243326 SPANXA2-OT1Q8N9U9 137 aa4.65□□□□□ -1.67
RIF1-201ENST00000243326 ATMQ13315 3056 aa4.64□□□□□ -1.67
RIF1-201ENST00000243326 KRTAP1-3Q8IUG1 177 aa4.64□□□□□ -1.67
RIF1-201ENST00000243326 IGLV7-46A0A075B6I9 117 aa4.64□□□□□ -1.67
RIF1-201ENST00000243326 ADM2Q7Z4H4 148 aa4.64□□□□□ -1.67
RIF1-201ENST00000243326 A0A1B0GU33 70 aa4.63□□□□□ -1.67
RIF1-201ENST00000243326 J3QL48 77 aa4.61□□□□□ -1.67
RIF1-201ENST00000243326 TNP2Q05952 138 aa4.61□□□□□ -1.67
RIF1-201ENST00000243326 LINC01558Q9Y6Z2 57 aa4.61□□□□□ -1.67
RIF1-201ENST00000243326 KRTAP1-1Q07627 177 aa4.6□□□□□ -1.67
RIF1-201ENST00000243326 Q5W150 140 aa4.6□□□□□ -1.67
RIF1-201ENST00000243326 REV3LO60673 3130 aa4.6□□□□□ -1.67
RIF1-201ENST00000243326 BOD1L1Q8NFC6 3051 aa4.59□□□□□ -1.67
RIF1-201ENST00000243326 MXRA5Q9NR99 2828 aa4.58□□□□□ -1.68
RIF1-201ENST00000243326 SPATA8Q6RVD6 105 aa4.58□□□□□ -1.68
RIF1-201ENST00000243326 CELSR1Q9NYQ6 3014 aa4.56□□□□□ -1.68
RIF1-201ENST00000243326 KRTAP1-5Q9BYS1 174 aa4.56□□□□□ -1.68
RIF1-201ENST00000243326 A0A087X002 238 aa4.56□□□□□ -1.68
RIF1-201ENST00000243326 NOTCH2NLQ7Z3S9 236 aa4.56□□□□□ -1.68
RIF1-201ENST00000243326 WDFY4Q6ZS81 3184 aa4.55□□□□□ -1.68
RIF1-201ENST00000243326 PANO1I0J062 215 aa4.55□□□□□ -1.68
RIF1-201ENST00000243326 XIRP2A4UGR9 3374 aa4.55□□□□□ -1.68
RIF1-201ENST00000243326 KRTAP26-1Q6PEX3 210 aa4.54□□□□□ -1.68
RIF1-201ENST00000243326 WWC2-AS2Q96NR7 200 aa4.53□□□□□ -1.68
RIF1-201ENST00000243326 LINC00472Q9H8W2 130 aa4.52□□□□□ -1.69
RIF1-201ENST00000243326 ZANQ9Y493 2812 aa4.52□□□□□ -1.69
RIF1-201ENST00000243326 CAMK2N1Q7Z7J9 78 aa4.51□□□□□ -1.69
RIF1-201ENST00000243326 DNAH14Q0VDD8 3507 aa4.5□□□□□ -1.69
RIF1-201ENST00000243326 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
RIF1-201ENST00000243326 FBN2P35556 2912 aa4.49□□□□□ -1.69
RIF1-201ENST00000243326 TGP01266 2768 aa4.49□□□□□ -1.69
RIF1-201ENST00000243326 MKI67P46013 3256 aaKnown RBP4.49□□□□□ -1.69
RIF1-201ENST00000243326 ZCCHC13Q8WW36 166 aaKnown RBP4.48□□□□□ -1.69
RIF1-201ENST00000243326 S4R3F8 94 aa4.48□□□□□ -1.69
RIF1-201ENST00000243326 KRTAP11-1Q8IUC1 163 aa4.48□□□□□ -1.69
RIF1-201ENST00000243326 SPRR1AP35321 89 aa4.46□□□□□ -1.7
RIF1-201ENST00000243326 SZT2Q5T011 3432 aa4.46□□□□□ -1.7
RIF1-201ENST00000243326 BRCA2P51587 3418 aa4.45□□□□□ -1.7
RIF1-201ENST00000243326 A6NN06 94 aa4.45□□□□□ -1.7
RIF1-201ENST00000243326 H1FX-AS1Q4G0G2 97 aa4.44□□□□□ -1.7
RIF1-201ENST00000243326 KRTAP10-2P60368 255 aa4.44□□□□□ -1.7
RIF1-201ENST00000243326 CDH23Q9H251 3354 aa4.43□□□□□ -1.7
RIF1-201ENST00000243326 ROMO1P60602 79 aa4.43□□□□□ -1.7
RIF1-201ENST00000243326 Q6ZSA8 131 aa4.43□□□□□ -1.7
RIF1-201ENST00000243326 CFAP47Q6ZTR5 3102 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms