RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 DSCR10P59022 87 aa7.61□□□□□ -1.19
SEC61A1-201ENST00000243253 LINC00474Q9P2X8 69 aa7.61□□□□□ -1.19
SEC61A1-201ENST00000243253 ZCCHC13Q8WW36 166 aaKnown RBP7.61□□□□□ -1.19
SEC61A1-201ENST00000243253 K7EIL1 84 aa7.6□□□□□ -1.19
SEC61A1-201ENST00000243253 PRYO14603 147 aa7.6□□□□□ -1.19
SEC61A1-201ENST00000243253 ATP5EP56381 51 aaPredicted RBP7.6□□□□□ -1.19
SEC61A1-201ENST00000243253 LINC00336Q6ZUF6 198 aa7.6□□□□□ -1.19
SEC61A1-201ENST00000243253 DHRS4-AS1Q9P1J3 65 aa7.6□□□□□ -1.19
SEC61A1-201ENST00000243253 SMIM26A0A096LP01 95 aa7.59□□□□□ -1.19
SEC61A1-201ENST00000243253 C1orf137Q5JT78 98 aa7.59□□□□□ -1.19
SEC61A1-201ENST00000243253 Q8NBF4 154 aa7.59□□□□□ -1.19
SEC61A1-201ENST00000243253 MRPL55Q7Z7F7 128 aaKnown RBP7.57□□□□□ -1.2
SEC61A1-201ENST00000243253 PHF5AQ7RTV0 110 aaKnown RBP7.57□□□□□ -1.2
SEC61A1-201ENST00000243253 KRTAP1-5Q9BYS1 174 aa7.56□□□□□ -1.2
SEC61A1-201ENST00000243253 RPL37AP61513 92 aaKnown RBP7.56□□□□□ -1.2
SEC61A1-201ENST00000243253 H0Y9J4 135 aa7.54□□□□□ -1.2
SEC61A1-201ENST00000243253 A0A087WSZ3 146 aa7.54□□□□□ -1.2
SEC61A1-201ENST00000243253 HECTD4Q9Y4D8 3996 aa7.54□□□□□ -1.2
SEC61A1-201ENST00000243253 K7EQZ3 153 aa7.53□□□□□ -1.2
SEC61A1-201ENST00000243253 NDUFS5O43920 106 aa7.53□□□□□ -1.2
SEC61A1-201ENST00000243253 FRAS1Q86XX4 4008 aa7.53□□□□□ -1.2
SEC61A1-201ENST00000243253 IGLV9-49A0A0B4J1Y8 123 aa7.52□□□□□ -1.21
SEC61A1-201ENST00000243253 UBE2AP49459 152 aa7.52□□□□□ -1.21
SEC61A1-201ENST00000243253 IGLV8-61A0A075B6I0 122 aa7.52□□□□□ -1.21
SEC61A1-201ENST00000243253 PLECQ15149 4684 aaKnown RBP7.52□□□□□ -1.21
SEC61A1-201ENST00000243253 PSPHP1O15172 72 aa7.52□□□□□ -1.21
SEC61A1-201ENST00000243253 MDFIQ99750 246 aa7.51□□□□□ -1.21
SEC61A1-201ENST00000243253 REG3GQ6UW15 175 aa7.51□□□□□ -1.21
SEC61A1-201ENST00000243253 PRO0628Q9UI54 55 aa7.51□□□□□ -1.21
SEC61A1-201ENST00000243253 ANAPC11Q9NYG5 84 aa7.5□□□□□ -1.21
SEC61A1-201ENST00000243253 PRKDCP78527 4128 aaKnown RBP7.49□□□□□ -1.21
SEC61A1-201ENST00000243253 hDV103S1A0JD37 113 aa7.49□□□□□ -1.21
SEC61A1-201ENST00000243253 LINC00476Q8WZB0 136 aa7.49□□□□□ -1.21
SEC61A1-201ENST00000243253 IGFL1Q6UW32 110 aa7.48□□□□□ -1.21
SEC61A1-201ENST00000243253 KRTAP11-1Q8IUC1 163 aa7.48□□□□□ -1.21
SEC61A1-201ENST00000243253 SEC61GP60059 68 aa7.47□□□□□ -1.21
SEC61A1-201ENST00000243253 LINC00208Q96KT6 92 aa7.47□□□□□ -1.21
SEC61A1-201ENST00000243253 FBN3Q75N90 2809 aa7.47□□□□□ -1.21
SEC61A1-201ENST00000243253 KRTAP29-1A8MX34 341 aaPredicted RBP7.46□□□□□ -1.22
SEC61A1-201ENST00000243253 DNAH8Q96JB1 4490 aa7.44□□□□□ -1.22
SEC61A1-201ENST00000243253 SPINK6Q6UWN8 80 aa7.44□□□□□ -1.22
SEC61A1-201ENST00000243253 C4orf48Q5BLP8 95 aa7.44□□□□□ -1.22
SEC61A1-201ENST00000243253 HCG22E2RYF7 251 aa7.43□□□□□ -1.22
SEC61A1-201ENST00000243253 MP68P56378 58 aa7.43□□□□□ -1.22
SEC61A1-201ENST00000243253 CNBPP62633 177 aaKnown RBP7.43□□□□□ -1.22
SEC61A1-201ENST00000243253 C1orf64Q8NEQ6 169 aa7.42□□□□□ -1.22
SEC61A1-201ENST00000243253 CYP4F30PQ9H0H9 118 aa7.42□□□□□ -1.22
SEC61A1-201ENST00000243253 PANO1I0J062 215 aa7.42□□□□□ -1.22
SEC61A1-201ENST00000243253 C16orf90A8MZG2 172 aa7.41□□□□□ -1.22
SEC61A1-201ENST00000243253 PCOTHQ58A44 107 aa7.41□□□□□ -1.22
SEC61A1-201ENST00000243253 DNAH2Q9P225 4427 aa7.41□□□□□ -1.22
SEC61A1-201ENST00000243253 VPS13DQ5THJ4 4388 aa7.41□□□□□ -1.22
SEC61A1-201ENST00000243253 SPRR1BP22528 89 aa7.41□□□□□ -1.22
SEC61A1-201ENST00000243253 Q1T7F1 81 aa7.41□□□□□ -1.22
SEC61A1-201ENST00000243253 SPTSSBQ8NFR3 76 aa7.41□□□□□ -1.22
SEC61A1-201ENST00000243253 STARD9Q9P2P6 4700 aa7.4□□□□□ -1.22
SEC61A1-201ENST00000243253 CDK2AP2O75956 126 aa7.38□□□□□ -1.23
SEC61A1-201ENST00000243253 ALMS1Q8TCU4 4167 aa7.38□□□□□ -1.23
SEC61A1-201ENST00000243253 LINC00472Q9H8W2 130 aa7.38□□□□□ -1.23
SEC61A1-201ENST00000243253 LY6G6CO95867 125 aa7.37□□□□□ -1.23
SEC61A1-201ENST00000243253 KMT2AQ03164 3969 aa7.37□□□□□ -1.23
SEC61A1-201ENST00000243253 DNAH17Q9UFH2 4485 aa7.36□□□□□ -1.23
SEC61A1-201ENST00000243253 KRTAP13-1Q8IUC0 172 aa7.35□□□□□ -1.23
SEC61A1-201ENST00000243253 TRAV22A0A0B4J277 110 aa7.35□□□□□ -1.23
SEC61A1-201ENST00000243253 MEGF8Q7Z7M0 2845 aa7.35□□□□□ -1.23
SEC61A1-201ENST00000243253 V9GYY9 64 aa7.34□□□□□ -1.23
SEC61A1-201ENST00000243253 RETNLBQ9BQ08 111 aa7.34□□□□□ -1.23
SEC61A1-201ENST00000243253 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.33□□□□□ -1.24
SEC61A1-201ENST00000243253 ASB16-AS1Q495Z4 193 aa7.33□□□□□ -1.24
SEC61A1-201ENST00000243253 CASC2Q6XLA1 102 aa7.32□□□□□ -1.24
SEC61A1-201ENST00000243253 NDUFB1O75438 58 aa7.32□□□□□ -1.24
SEC61A1-201ENST00000243253 PRR15Q8IV56 129 aa7.32□□□□□ -1.24
SEC61A1-201ENST00000243253 B9D2Q9BPU9 175 aa7.32□□□□□ -1.24
SEC61A1-201ENST00000243253 C9orf163Q8N9P6 203 aa7.32□□□□□ -1.24
SEC61A1-201ENST00000243253 Q96NJ1 140 aa7.32□□□□□ -1.24
SEC61A1-201ENST00000243253 IGHV6-1A0A0B4J1U7 121 aa7.31□□□□□ -1.24
SEC61A1-201ENST00000243253 H0Y9P7 68 aa7.31□□□□□ -1.24
SEC61A1-201ENST00000243253 NBDYA0A0U1RRE5 68 aa7.3□□□□□ -1.24
SEC61A1-201ENST00000243253 A8MWP4 228 aa7.29□□□□□ -1.24
SEC61A1-201ENST00000243253 CHKB-CPT1BH3BT56 60 aa7.29□□□□□ -1.24
SEC61A1-201ENST00000243253 APLNQ9ULZ1 77 aa7.29□□□□□ -1.24
SEC61A1-201ENST00000243253 MOBPQ13875 183 aa7.29□□□□□ -1.24
SEC61A1-201ENST00000243253 C1orf195Q5TG92 126 aa7.28□□□□□ -1.24
SEC61A1-201ENST00000243253 SPANXA2-OT1Q8N9U9 137 aa7.28□□□□□ -1.24
SEC61A1-201ENST00000243253 CIRBP-AS1Q8TBR5 109 aa7.28□□□□□ -1.24
SEC61A1-201ENST00000243253 MMP24-AS1A0A0U1RRL7 71 aa7.27□□□□□ -1.25
SEC61A1-201ENST00000243253 Q6ZRN7 208 aaPredicted RBP7.26□□□□□ -1.25
SEC61A1-201ENST00000243253 PRR15LQ9BU68 103 aa7.26□□□□□ -1.25
SEC61A1-201ENST00000243253 A8MUN3 132 aa7.26□□□□□ -1.25
SEC61A1-201ENST00000243253 DNAH6Q9C0G6 4158 aa7.25□□□□□ -1.25
SEC61A1-201ENST00000243253 H3BPC8 53 aa7.25□□□□□ -1.25
SEC61A1-201ENST00000243253 KRTAP21-3Q3LHN1 58 aa7.24□□□□□ -1.25
SEC61A1-201ENST00000243253 A6NED7 52 aa7.23□□□□□ -1.25
SEC61A1-201ENST00000243253 C14orf177Q52M58 125 aa7.23□□□□□ -1.25
SEC61A1-201ENST00000243253 Q5VV11 94 aa7.22□□□□□ -1.25
SEC61A1-201ENST00000243253 IGLV5-52A0A0A0MRZ9 124 aa7.21□□□□□ -1.25
SEC61A1-201ENST00000243253 RTL8CO15255 209 aa7.21□□□□□ -1.25
SEC61A1-201ENST00000243253 LINC00483Q53H64 154 aa7.21□□□□□ -1.25
SEC61A1-201ENST00000243253 Q8N9P0 234 aaPredicted RBP7.2□□□□□ -1.26
SEC61A1-201ENST00000243253 DNAH11Q96DT5 4516 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms