RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TLX1NBP0CAT3 122 aa7.1□□□□□ -1.27
COPA-201ENST00000241704 Q8N377 158 aa7.1□□□□□ -1.27
COPA-201ENST00000241704 IGKV2D-30A0A075B6S6 120 aa7.09□□□□□ -1.27
COPA-201ENST00000241704 IGKV2-30P06310 120 aa7.09□□□□□ -1.27
COPA-201ENST00000241704 STAB2Q8WWQ8 2551 aa7.09□□□□□ -1.27
COPA-201ENST00000241704 Q8N9P0 234 aaPredicted RBP7.08□□□□□ -1.28
COPA-201ENST00000241704 A0A1W2PNM2 257 aa7.08□□□□□ -1.28
COPA-201ENST00000241704 CASC10Q5T4H9 136 aa7.08□□□□□ -1.28
COPA-201ENST00000241704 Q75L30 129 aa7.08□□□□□ -1.28
COPA-201ENST00000241704 IGLV5-48A0A075B6I7 105 aa7.07□□□□□ -1.28
COPA-201ENST00000241704 ITPR1Q14643 2758 aa7.07□□□□□ -1.28
COPA-201ENST00000241704 ITPR2Q14571 2701 aa7.07□□□□□ -1.28
COPA-201ENST00000241704 PLA2G2DQ9UNK4 145 aa7.07□□□□□ -1.28
COPA-201ENST00000241704 SPINK1P00995 79 aa7.06□□□□□ -1.28
COPA-201ENST00000241704 TACC2O95359 2948 aa7.05□□□□□ -1.28
COPA-201ENST00000241704 ZNF861PO60384 105 aa7.05□□□□□ -1.28
COPA-201ENST00000241704 LRBAP50851 2863 aa7.05□□□□□ -1.28
COPA-201ENST00000241704 ZZEF1O43149 2961 aa7.04□□□□□ -1.28
COPA-201ENST00000241704 DSCR10P59022 87 aa7.04□□□□□ -1.28
COPA-201ENST00000241704 TNP2Q05952 138 aa7.04□□□□□ -1.28
COPA-201ENST00000241704 KALRNO60229 2985 aa7.03□□□□□ -1.28
COPA-201ENST00000241704 CNBPP62633 177 aaKnown RBP7.02□□□□□ -1.29
COPA-201ENST00000241704 C8orf87E5RJ46 101 aa7.02□□□□□ -1.29
COPA-201ENST00000241704 UTP20O75691 2785 aaKnown RBP7.02□□□□□ -1.29
COPA-201ENST00000241704 TP53AIP1Q9HCN2 124 aa7.02□□□□□ -1.29
COPA-201ENST00000241704 LINC00313P59037 77 aa7.01□□□□□ -1.29
COPA-201ENST00000241704 LINC00304Q8N9R0 145 aa7.01□□□□□ -1.29
COPA-201ENST00000241704 ZCCHC13Q8WW36 166 aaKnown RBP7.01□□□□□ -1.29
COPA-201ENST00000241704 MYO15AQ9UKN7 3530 aa7.01□□□□□ -1.29
COPA-201ENST00000241704 DMBT1Q9UGM3 2413 aaPredicted RBP7□□□□□ -1.29
COPA-201ENST00000241704 SSBP3-AS1Q7Z2R9 100 aa6.99□□□□□ -1.29
COPA-201ENST00000241704 NBEAL2Q6ZNJ1 2754 aa6.99□□□□□ -1.29
COPA-201ENST00000241704 SPRR4Q96PI1 79 aa6.99□□□□□ -1.29
COPA-201ENST00000241704 PSORS1C2Q9UIG4 136 aa6.99□□□□□ -1.29
COPA-201ENST00000241704 Q96NJ1 140 aa6.99□□□□□ -1.29
COPA-201ENST00000241704 IGLV7-43P04211 117 aa6.98□□□□□ -1.29
COPA-201ENST00000241704 HIVEP1P15822 2718 aa6.98□□□□□ -1.29
COPA-201ENST00000241704 A8MWP4 228 aa6.97□□□□□ -1.29
COPA-201ENST00000241704 TENM4Q6N022 2769 aa6.97□□□□□ -1.29
COPA-201ENST00000241704 A0A1W2PNN7 141 aa6.97□□□□□ -1.29
COPA-201ENST00000241704 LCE6AA0A183 80 aa6.97□□□□□ -1.29
COPA-201ENST00000241704 LOC400499M0QZD8 3231 aa6.97□□□□□ -1.29
COPA-201ENST00000241704 H3BS24 57 aa6.97□□□□□ -1.29
COPA-201ENST00000241704 IGFL1Q6UW32 110 aa6.96□□□□□ -1.3
COPA-201ENST00000241704 COX6B2Q6YFQ2 88 aa6.96□□□□□ -1.3
COPA-201ENST00000241704 APCP25054 2843 aa6.96□□□□□ -1.3
COPA-201ENST00000241704 IGLV5-37A0A075B6J1 123 aa6.96□□□□□ -1.3
COPA-201ENST00000241704 ANAPC11Q9NYG5 84 aa6.95□□□□□ -1.3
COPA-201ENST00000241704 A0A1B0GU69 56 aa6.94□□□□□ -1.3
COPA-201ENST00000241704 LINC01558Q9Y6Z2 57 aa6.94□□□□□ -1.3
COPA-201ENST00000241704 IGLV7-46A0A075B6I9 117 aa6.93□□□□□ -1.3
COPA-201ENST00000241704 A8MU10 97 aa6.93□□□□□ -1.3
COPA-201ENST00000241704 A6NN06 94 aa6.92□□□□□ -1.3
COPA-201ENST00000241704 ACYP2P14621 99 aa6.92□□□□□ -1.3
COPA-201ENST00000241704 LINC01554Q52M75 96 aa6.91□□□□□ -1.3
COPA-201ENST00000241704 A0A0G2JQZ4 141 aa6.91□□□□□ -1.3
COPA-201ENST00000241704 ZANQ9Y493 2812 aa6.9□□□□□ -1.31
COPA-201ENST00000241704 KMT2BQ9UMN6 2715 aaPredicted RBP6.89□□□□□ -1.31
COPA-201ENST00000241704 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
COPA-201ENST00000241704 PRAC1Q96KF2 57 aa6.87□□□□□ -1.31
COPA-201ENST00000241704 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
COPA-201ENST00000241704 HRNRQ86YZ3 2850 aaPredicted RBP6.87□□□□□ -1.31
COPA-201ENST00000241704 CFAP47Q6ZTR5 3102 aa6.87□□□□□ -1.31
COPA-201ENST00000241704 SPINK7P58062 85 aa6.85□□□□□ -1.31
COPA-201ENST00000241704 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.85□□□□□ -1.31
COPA-201ENST00000241704 MRPL34Q9BQ48 92 aaKnown RBP6.84□□□□□ -1.31
COPA-201ENST00000241704 KRTAP26-1Q6PEX3 210 aa6.84□□□□□ -1.31
COPA-201ENST00000241704 UQCR11O14957 56 aa6.82□□□□□ -1.32
COPA-201ENST00000241704 MIR22HGQ0VDD5 57 aa6.81□□□□□ -1.32
COPA-201ENST00000241704 KRTAP1-5Q9BYS1 174 aa6.8□□□□□ -1.32
COPA-201ENST00000241704 C8orf17Q9NRJ1 99 aa6.8□□□□□ -1.32
COPA-201ENST00000241704 WDFY3Q8IZQ1 3526 aa6.8□□□□□ -1.32
COPA-201ENST00000241704 PRR26Q8N8Z3 221 aa6.79□□□□□ -1.32
COPA-201ENST00000241704 SPRR1AP35321 89 aa6.78□□□□□ -1.32
COPA-201ENST00000241704 NIPBLQ6KC79 2804 aaeCLIP6.78□□□□□ -1.321e-6■■■□□ 18.6
COPA-201ENST00000241704 A0A1B0GVX0 72 aa6.78□□□□□ -1.32
COPA-201ENST00000241704 CRYBG3Q68DQ2 2970 aa6.77□□□□□ -1.32
COPA-201ENST00000241704 HRES1P13985 223 aa6.77□□□□□ -1.33
COPA-201ENST00000241704 KRTAP29-1A8MX34 341 aaPredicted RBP6.77□□□□□ -1.33
COPA-201ENST00000241704 MMP24-AS1A0A0U1RRL7 71 aa6.74□□□□□ -1.33
COPA-201ENST00000241704 PLAC8Q9NZF1 115 aa6.74□□□□□ -1.33
COPA-201ENST00000241704 CELSR2Q9HCU4 2923 aa6.73□□□□□ -1.33
COPA-201ENST00000241704 DCHS1Q96JQ0 3298 aa6.73□□□□□ -1.33
COPA-201ENST00000241704 ASB16-AS1Q495Z4 193 aa6.73□□□□□ -1.33
COPA-201ENST00000241704 IGLV8-61A0A075B6I0 122 aa6.72□□□□□ -1.33
COPA-201ENST00000241704 MUC3AQ02505 3323 aa6.71□□□□□ -1.33
COPA-201ENST00000241704 KRTAP21-3Q3LHN1 58 aa6.71□□□□□ -1.34
COPA-201ENST00000241704 NF1P21359 2839 aa6.71□□□□□ -1.34
COPA-201ENST00000241704 LINC00472Q9H8W2 130 aa6.7□□□□□ -1.34
COPA-201ENST00000241704 KRTAP4-16G5E9R7 235 aaPredicted RBP6.69□□□□□ -1.34
COPA-201ENST00000241704 Q5VSD8 79 aa6.69□□□□□ -1.34
COPA-201ENST00000241704 ASH1LQ9NR48 2969 aaKnown RBP6.69□□□□□ -1.34
COPA-201ENST00000241704 Q6ZSA8 131 aa6.69□□□□□ -1.34
COPA-201ENST00000241704 CSAG1Q6PB30 78 aa6.68□□□□□ -1.34
COPA-201ENST00000241704 KRTAP10-2P60368 255 aa6.67□□□□□ -1.34
COPA-201ENST00000241704 KRTAP10-1P60331 282 aa6.67□□□□□ -1.34
COPA-201ENST00000241704 SPRR1BP22528 89 aa6.66□□□□□ -1.34
COPA-201ENST00000241704 DCHS2Q6V1P9 2916 aa6.66□□□□□ -1.34
COPA-201ENST00000241704 FBN2P35556 2912 aa6.65□□□□□ -1.34
COPA-201ENST00000241704 RELNP78509 3460 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms