RNA–Protein interactions for RNA: ENST00000236698.9

STAG1-201, Transcript of stromal antigen 1, humanhuman

TSL 1 (best) BASIC

Gene STAG1, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-201ENST00000236698 GIG44P09565 113 aaPredicted RBP4.42□□□□□ -1.7
STAG1-201ENST00000236698 Q6ZSA8 131 aa4.42□□□□□ -1.7
STAG1-201ENST00000236698 MGAQ8IWI9 3026 aa4.42□□□□□ -1.7
STAG1-201ENST00000236698 CHD6Q8TD26 2715 aa4.41□□□□□ -1.7
STAG1-201ENST00000236698 S4R3F8 94 aa4.41□□□□□ -1.7
STAG1-201ENST00000236698 NBDYA0A0U1RRE5 68 aa4.41□□□□□ -1.7
STAG1-201ENST00000236698 FLNCQ14315 2725 aa4.41□□□□□ -1.7
STAG1-201ENST00000236698 A0A1W2PNM2 257 aa4.4□□□□□ -1.7
STAG1-201ENST00000236698 KRTAP1-1Q07627 177 aa4.4□□□□□ -1.71
STAG1-201ENST00000236698 AKAP13Q12802 2813 aa4.39□□□□□ -1.71
STAG1-201ENST00000236698 SMR3AQ99954 134 aa4.39□□□□□ -1.71
STAG1-201ENST00000236698 COL6A5A8TX70 2615 aa4.38□□□□□ -1.71
STAG1-201ENST00000236698 KCNQ1DNQ9H478 68 aa4.38□□□□□ -1.71
STAG1-201ENST00000236698 DSPP15924 2871 aaKnown RBP4.38□□□□□ -1.71
STAG1-201ENST00000236698 ZNF861PO60384 105 aa4.37□□□□□ -1.71
STAG1-201ENST00000236698 IGFL1Q6UW32 110 aa4.37□□□□□ -1.71
STAG1-201ENST00000236698 TEP1Q99973 2627 aaKnown RBP4.37□□□□□ -1.71
STAG1-201ENST00000236698 PCNTO95613 3336 aa4.37□□□□□ -1.71
STAG1-201ENST00000236698 WWC2-AS2Q96NR7 200 aa4.36□□□□□ -1.71
STAG1-201ENST00000236698 NOTCH1P46531 2555 aa4.36□□□□□ -1.71
STAG1-201ENST00000236698 A0A0C4DFX4 3053 aa4.35□□□□□ -1.71
STAG1-201ENST00000236698 Q8N377 158 aa4.35□□□□□ -1.71
STAG1-201ENST00000236698 C9orf92A6NGG3 77 aa4.35□□□□□ -1.71
STAG1-201ENST00000236698 M0R2T5 61 aa4.35□□□□□ -1.71
STAG1-201ENST00000236698 A0A1W2PNN7 141 aa4.34□□□□□ -1.71
STAG1-201ENST00000236698 KRTAP24-1Q3LI83 254 aa4.34□□□□□ -1.71
STAG1-201ENST00000236698 NBEAL1Q6ZS30 2694 aa4.33□□□□□ -1.72
STAG1-201ENST00000236698 RPL37P61927 97 aaKnown RBP4.33□□□□□ -1.72
STAG1-201ENST00000236698 C5orf42Q9H799 3197 aa4.33□□□□□ -1.72
STAG1-201ENST00000236698 SETXQ7Z333 2677 aaKnown RBP4.32□□□□□ -1.72
STAG1-201ENST00000236698 TRIOO75962 3097 aa4.32□□□□□ -1.72
STAG1-201ENST00000236698 UBR5O95071 2799 aaPredicted RBP4.32□□□□□ -1.72
STAG1-201ENST00000236698 KRTAP4-16G5E9R7 235 aaPredicted RBP4.32□□□□□ -1.72
STAG1-201ENST00000236698 CR1P17927 2039 aa4.31□□□□□ -1.72
STAG1-201ENST00000236698 R4GN34 69 aa4.31□□□□□ -1.72
STAG1-201ENST00000236698 TEX15Q9BXT5 2789 aa4.31□□□□□ -1.72
STAG1-201ENST00000236698 Q8N1X5 172 aa4.31□□□□□ -1.72
STAG1-201ENST00000236698 UTRNP46939 3433 aa4.3□□□□□ -1.72
STAG1-201ENST00000236698 ZCCHC13Q8WW36 166 aaKnown RBP4.3□□□□□ -1.72
STAG1-201ENST00000236698 NSD1Q96L73 2696 aaPredicted RBP4.29□□□□□ -1.72
STAG1-201ENST00000236698 MAP1AP78559 2803 aaPredicted RBP4.29□□□□□ -1.72
STAG1-201ENST00000236698 WDFY4Q6ZS81 3184 aa4.28□□□□□ -1.73
STAG1-201ENST00000236698 NIPBLQ6KC79 2804 aaeCLIP4.27□□□□□ -1.73
STAG1-201ENST00000236698 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
STAG1-201ENST00000236698 SPRR4Q96PI1 79 aa4.27□□□□□ -1.73
STAG1-201ENST00000236698 LAMA3Q16787 3333 aa4.26□□□□□ -1.73
STAG1-201ENST00000236698 CNBPP62633 177 aaKnown RBP4.26□□□□□ -1.73
STAG1-201ENST00000236698 ITPR2Q14571 2701 aa4.25□□□□□ -1.73
STAG1-201ENST00000236698 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
STAG1-201ENST00000236698 KRTAP10-3P60369 221 aa4.25□□□□□ -1.73
STAG1-201ENST00000236698 Q5W150 140 aa4.25□□□□□ -1.73
STAG1-201ENST00000236698 KMT2BQ9UMN6 2715 aaPredicted RBP4.25□□□□□ -1.73
STAG1-201ENST00000236698 LAMA2P24043 3122 aaKnown RBP4.24□□□□□ -1.73
STAG1-201ENST00000236698 CFAP54Q96N23 3096 aa4.23□□□□□ -1.73
STAG1-201ENST00000236698 ITPR1Q14643 2758 aa4.23□□□□□ -1.73
STAG1-201ENST00000236698 MKI67P46013 3256 aaKnown RBP4.23□□□□□ -1.73
STAG1-201ENST00000236698 VPS13AQ96RL7 3174 aa4.22□□□□□ -1.73
STAG1-201ENST00000236698 K7EIL1 84 aa4.22□□□□□ -1.73
STAG1-201ENST00000236698 FAM168BA1KXE4 195 aa4.2□□□□□ -1.74
STAG1-201ENST00000236698 KRTAP3-3Q9BYR6 98 aa4.2□□□□□ -1.74
STAG1-201ENST00000236698 KRTAP3-2Q9BYR7 98 aa4.2□□□□□ -1.74
STAG1-201ENST00000236698 P0C880 135 aa4.2□□□□□ -1.74
STAG1-201ENST00000236698 SPRR1AP35321 89 aa4.2□□□□□ -1.74
STAG1-201ENST00000236698 PANO1I0J062 215 aa4.19□□□□□ -1.74
STAG1-201ENST00000236698 A0A0G2JQZ4 141 aa4.19□□□□□ -1.74
STAG1-201ENST00000236698 KRTAP10-11P60412 298 aa4.19□□□□□ -1.74
STAG1-201ENST00000236698 PRUNE2Q8WUY3 3088 aa4.19□□□□□ -1.74
STAG1-201ENST00000236698 M0QZ58 72 aa4.18□□□□□ -1.74
STAG1-201ENST00000236698 STAB2Q8WWQ8 2551 aa4.18□□□□□ -1.74
STAG1-201ENST00000236698 FRYQ5TBA9 3013 aa4.17□□□□□ -1.74
STAG1-201ENST00000236698 A0A087WTM6 91 aa4.17□□□□□ -1.74
STAG1-201ENST00000236698 SPRR1BP22528 89 aa4.17□□□□□ -1.74
STAG1-201ENST00000236698 BAHCC1Q9P281 2608 aa4.16□□□□□ -1.74
STAG1-201ENST00000236698 APCP25054 2843 aa4.15□□□□□ -1.74
STAG1-201ENST00000236698 HIVEP1P15822 2718 aa4.15□□□□□ -1.75
STAG1-201ENST00000236698 NBEAL2Q6ZNJ1 2754 aa4.14□□□□□ -1.75
STAG1-201ENST00000236698 KRTAP26-1Q6PEX3 210 aa4.14□□□□□ -1.75
STAG1-201ENST00000236698 NBEAQ8NFP9 2946 aa4.13□□□□□ -1.75
STAG1-201ENST00000236698 FRYLO94915 3013 aa4.12□□□□□ -1.75
STAG1-201ENST00000236698 ATMQ13315 3056 aa4.12□□□□□ -1.75
STAG1-201ENST00000236698 ADGRG4Q8IZF6 3080 aa4.12□□□□□ -1.75
STAG1-201ENST00000236698 ZANQ9Y493 2812 aa4.11□□□□□ -1.75
STAG1-201ENST00000236698 UTP20O75691 2785 aaKnown RBP4.1□□□□□ -1.75
STAG1-201ENST00000236698 ZZEF1O43149 2961 aa4.09□□□□□ -1.75
STAG1-201ENST00000236698 COL12A1Q99715 3063 aa4.09□□□□□ -1.75
STAG1-201ENST00000236698 MMP24-AS1A0A0U1RRL7 71 aa4.08□□□□□ -1.76
STAG1-201ENST00000236698 TNP1P09430 55 aa4.07□□□□□ -1.76
STAG1-201ENST00000236698 UNC80Q8N2C7 3258 aa4.07□□□□□ -1.76
STAG1-201ENST00000236698 DMXL2Q8TDJ6 3036 aa4.07□□□□□ -1.76
STAG1-201ENST00000236698 BRCA2P51587 3418 aa4.07□□□□□ -1.76
STAG1-201ENST00000236698 KALRNO60229 2985 aa4.06□□□□□ -1.76
STAG1-201ENST00000236698 LCE6AA0A183 80 aa4.06□□□□□ -1.76
STAG1-201ENST00000236698 TACC2O95359 2948 aa4.05□□□□□ -1.76
STAG1-201ENST00000236698 LAMA1P25391 3075 aa4.05□□□□□ -1.76
STAG1-201ENST00000236698 PLAC8Q9NZF1 115 aa4.04□□□□□ -1.76
STAG1-201ENST00000236698 TNRC18O15417 2968 aaPredicted RBP4.04□□□□□ -1.76
STAG1-201ENST00000236698 NF1P21359 2839 aa4.02□□□□□ -1.77
STAG1-201ENST00000236698 KRTAP11-1Q8IUC1 163 aa4.02□□□□□ -1.77
STAG1-201ENST00000236698 HRNRQ86YZ3 2850 aaPredicted RBP4.02□□□□□ -1.77
STAG1-201ENST00000236698 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms