RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 A0A087WVE0 104 aa11.17□□□□□ -0.62
CBX1-201ENST00000225603 DHRS4-AS1Q9P1J3 65 aa11.16□□□□□ -0.62
CBX1-201ENST00000225603 ETDCA0A1B0GVM5 59 aa11.16□□□□□ -0.62
CBX1-201ENST00000225603 ATOX1O00244 68 aa11.14□□□□□ -0.63
CBX1-201ENST00000225603 Q9BRP9 147 aa11.14□□□□□ -0.63
CBX1-201ENST00000225603 Q6ZVQ6 151 aa11.13□□□□□ -0.63
CBX1-201ENST00000225603 PRLHP81277 87 aa11.13□□□□□ -0.63
CBX1-201ENST00000225603 FAM19A1Q7Z5A9 133 aa11.13□□□□□ -0.63
CBX1-201ENST00000225603 Q8N377 158 aa11.13□□□□□ -0.63
CBX1-201ENST00000225603 DEFB105AQ8NG35 78 aa11.12□□□□□ -0.63
CBX1-201ENST00000225603 PSORS1C2Q9UIG4 136 aa11.12□□□□□ -0.63
CBX1-201ENST00000225603 LINC01547P58512 204 aaPredicted RBP11.12□□□□□ -0.63
CBX1-201ENST00000225603 BCE1O60756 84 aa11.09□□□□□ -0.63
CBX1-201ENST00000225603 C3orf22Q8N5N4 141 aa11.09□□□□□ -0.63
CBX1-201ENST00000225603 ERC2-IT1O76042 136 aa11.08□□□□□ -0.64
CBX1-201ENST00000225603 UQCRQO14949 82 aa11.08□□□□□ -0.64
CBX1-201ENST00000225603 C1orf137Q5JT78 98 aa11.07□□□□□ -0.64
CBX1-201ENST00000225603 COX7CP15954 63 aa11.06□□□□□ -0.64
CBX1-201ENST00000225603 KRTAP13-1Q8IUC0 172 aa11.06□□□□□ -0.64
CBX1-201ENST00000225603 ST20-AS1Q8NBB2 130 aa11.06□□□□□ -0.64
CBX1-201ENST00000225603 IGLV5-48A0A075B6I7 105 aa11.05□□□□□ -0.64
CBX1-201ENST00000225603 APOBP04114 4563 aaKnown RBP11.05□□□□□ -0.64
CBX1-201ENST00000225603 UBE2AP49459 152 aa11.05□□□□□ -0.64
CBX1-201ENST00000225603 CXCL6P80162 114 aa11.04□□□□□ -0.64
CBX1-201ENST00000225603 HIGD2AQ9BW72 106 aa11.04□□□□□ -0.64
CBX1-201ENST00000225603 SS18L2Q9UHA2 77 aa11.04□□□□□ -0.64
CBX1-201ENST00000225603 H0Y9J4 135 aa11.03□□□□□ -0.64
CBX1-201ENST00000225603 C9orf153Q5TBE3 101 aa11.03□□□□□ -0.64
CBX1-201ENST00000225603 SRRM2Q9UQ35 2752 aaKnown RBP11.02□□□□□ -0.65
CBX1-201ENST00000225603 SERP2Q8N6R1 65 aa11.01□□□□□ -0.65
CBX1-201ENST00000225603 SMR3BP02814 79 aaPredicted RBP10.99□□□□□ -0.65
CBX1-201ENST00000225603 IGLV7-43P04211 117 aa10.98□□□□□ -0.65
CBX1-201ENST00000225603 ZNF861PO60384 105 aa10.96□□□□□ -0.65
CBX1-201ENST00000225603 CRYGAP11844 174 aa10.96□□□□□ -0.66
CBX1-201ENST00000225603 NREPQ16612 68 aa10.94□□□□□ -0.66
CBX1-201ENST00000225603 VPS13BQ7Z7G8 4022 aa10.94□□□□□ -0.66
CBX1-201ENST00000225603 A0A1W2PNM2 257 aa10.94□□□□□ -0.66
CBX1-201ENST00000225603 EPPK1P58107 5090 aaKnown RBP10.93□□□□□ -0.66
CBX1-201ENST00000225603 A0A1B0GW54 56 aa10.93□□□□□ -0.66
CBX1-201ENST00000225603 SMIM29Q86T20 159 aa10.93□□□□□ -0.66
CBX1-201ENST00000225603 FAT1Q14517 4588 aa10.91□□□□□ -0.66
CBX1-201ENST00000225603 Q8NBF4 154 aa10.91□□□□□ -0.66
CBX1-201ENST00000225603 RPL37AP61513 92 aaKnown RBP10.89□□□□□ -0.67
CBX1-201ENST00000225603 SPRR4Q96PI1 79 aa10.88□□□□□ -0.67
CBX1-201ENST00000225603 F8WEM9 126 aa10.87□□□□□ -0.67
CBX1-201ENST00000225603 BPY2O14599 106 aa10.87□□□□□ -0.67
CBX1-201ENST00000225603 CYSTM1Q9H1C7 97 aa10.86□□□□□ -0.67
CBX1-201ENST00000225603 CDK2AP2O75956 126 aa10.86□□□□□ -0.67
CBX1-201ENST00000225603 IGKV4-1P06312 121 aa10.85□□□□□ -0.67
CBX1-201ENST00000225603 Q8N9L7 120 aa10.85□□□□□ -0.67
CBX1-201ENST00000225603 KRTAP10-4P60372 401 aaPredicted RBP10.85□□□□□ -0.67
CBX1-201ENST00000225603 HSPG2P98160 4391 aa10.85□□□□□ -0.67
CBX1-201ENST00000225603 TRAV7A0A075B6U4 112 aa10.84□□□□□ -0.67
CBX1-201ENST00000225603 SPRR1BP22528 89 aa10.84□□□□□ -0.67
CBX1-201ENST00000225603 SMIM20Q8N5G0 67 aa10.84□□□□□ -0.67
CBX1-201ENST00000225603 ANAPC11Q9NYG5 84 aa10.84□□□□□ -0.67
CBX1-201ENST00000225603 IGLV8-61A0A075B6I0 122 aa10.82□□□□□ -0.68
CBX1-201ENST00000225603 IGFL1Q6UW32 110 aa10.82□□□□□ -0.68
CBX1-201ENST00000225603 KRTAP17-1Q9BYP8 105 aa10.81□□□□□ -0.68
CBX1-201ENST00000225603 RYR1P21817 5038 aa10.81□□□□□ -0.68
CBX1-201ENST00000225603 LINC00483Q53H64 154 aa10.8□□□□□ -0.68
CBX1-201ENST00000225603 ZNF706Q9Y5V0 76 aaPredicted RBP10.8□□□□□ -0.68
CBX1-201ENST00000225603 A0A0G2JQZ4 141 aa10.79□□□□□ -0.68
CBX1-201ENST00000225603 KIAA1109Q2LD37 5005 aa10.79□□□□□ -0.68
CBX1-201ENST00000225603 C20orf197Q8N268 126 aa10.77□□□□□ -0.69
CBX1-201ENST00000225603 TMEM258P61165 79 aa10.74□□□□□ -0.69
CBX1-201ENST00000225603 SPINK6Q6UWN8 80 aa10.74□□□□□ -0.69
CBX1-201ENST00000225603 FAM229AH3BQW9 127 aa10.73□□□□□ -0.69
CBX1-201ENST00000225603 KRTAP1-4P0C5Y4 121 aa10.73□□□□□ -0.69
CBX1-201ENST00000225603 IGLV9-49A0A0B4J1Y8 123 aa10.72□□□□□ -0.69
CBX1-201ENST00000225603 Q5VSD8 79 aa10.72□□□□□ -0.69
CBX1-201ENST00000225603 DSCR10P59022 87 aa10.72□□□□□ -0.69
CBX1-201ENST00000225603 PLA2G1BP04054 148 aaKnown RBP10.7□□□□□ -0.7
CBX1-201ENST00000225603 A0A087WSZ3 146 aa10.69□□□□□ -0.7
CBX1-201ENST00000225603 A0A087X002 238 aa10.68□□□□□ -0.7
CBX1-201ENST00000225603 KLKP1Q107X0 134 aa10.68□□□□□ -0.7
CBX1-201ENST00000225603 K7EQZ3 153 aa10.68□□□□□ -0.7
CBX1-201ENST00000225603 OCR1Q9BZK8 76 aa10.67□□□□□ -0.7
CBX1-201ENST00000225603 MOBPQ13875 183 aa10.66□□□□□ -0.7
CBX1-201ENST00000225603 KRTAP13-2Q52LG2 175 aa10.65□□□□□ -0.71
CBX1-201ENST00000225603 SNURFQ9Y675 71 aa10.65□□□□□ -0.71
CBX1-201ENST00000225603 Q8N1X5 172 aa10.64□□□□□ -0.71
CBX1-201ENST00000225603 H7BZZ5 65 aa10.63□□□□□ -0.71
CBX1-201ENST00000225603 FAM229BQ4G0N7 80 aa10.63□□□□□ -0.71
CBX1-201ENST00000225603 DEFB116Q30KQ4 102 aa10.62□□□□□ -0.71
CBX1-201ENST00000225603 J3KT08 172 aa10.6□□□□□ -0.71
CBX1-201ENST00000225603 TMEM254Q8TBM7 123 aa10.6□□□□□ -0.71
CBX1-201ENST00000225603 PKHD1L1Q86WI1 4243 aa10.6□□□□□ -0.71
CBX1-201ENST00000225603 RPS28P62857 69 aaKnown RBP10.58□□□□□ -0.72
CBX1-201ENST00000225603 HCG22E2RYF7 251 aa10.57□□□□□ -0.72
CBX1-201ENST00000225603 PRR26Q8N8Z3 221 aa10.57□□□□□ -0.72
CBX1-201ENST00000225603 BIRC6Q9NR09 4857 aa10.56□□□□□ -0.72
CBX1-201ENST00000225603 FAM236DA0A1B0GTK5 79 aa10.56□□□□□ -0.72
CBX1-201ENST00000225603 FAM236CP0DP71 79 aa10.56□□□□□ -0.72
CBX1-201ENST00000225603 NDUFC1O43677 76 aa10.55□□□□□ -0.72
CBX1-201ENST00000225603 HRCT1Q6UXD1 115 aa10.55□□□□□ -0.72
CBX1-201ENST00000225603 LINC00472Q9H8W2 130 aa10.54□□□□□ -0.72
CBX1-201ENST00000225603 SSBP3-AS1Q7Z2R9 100 aa10.54□□□□□ -0.72
CBX1-201ENST00000225603 A0A0U1RQV1 116 aa10.53□□□□□ -0.72
CBX1-201ENST00000225603 KRTAP4-5Q9BYR2 181 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms