RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
PAF1-201ENST00000221265 DHRS4-AS1Q9P1J3 65 aa9.49□□□□□ -0.89
PAF1-201ENST00000221265 LINC00474Q9P2X8 69 aa9.49□□□□□ -0.89
PAF1-201ENST00000221265 CXCL6P80162 114 aa9.47□□□□□ -0.89
PAF1-201ENST00000221265 ETDCA0A1B0GVM5 59 aa9.47□□□□□ -0.89
PAF1-201ENST00000221265 CYSTM1Q9H1C7 97 aa9.46□□□□□ -0.9
PAF1-201ENST00000221265 IGLV5-48A0A075B6I7 105 aa9.44□□□□□ -0.9
PAF1-201ENST00000221265 ST20-AS1Q8NBB2 130 aa9.44□□□□□ -0.9
PAF1-201ENST00000221265 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
PAF1-201ENST00000221265 SCXQ7RTU7 201 aa9.44□□□□□ -0.9
PAF1-201ENST00000221265 EPM2AB3EWF7 344 aa9.43□□□□□ -0.9
PAF1-201ENST00000221265 UBE2BP63146 152 aa9.43□□□□□ -0.9
PAF1-201ENST00000221265 FAM30AQ9NZY2 134 aa9.43□□□□□ -0.9
PAF1-201ENST00000221265 ERC2-IT1O76042 136 aa9.43□□□□□ -0.9
PAF1-201ENST00000221265 KRTAP10-1P60331 282 aa9.41□□□□□ -0.9
PAF1-201ENST00000221265 RYR3Q15413 4870 aa9.41□□□□□ -0.9
PAF1-201ENST00000221265 PLAC8Q9NZF1 115 aa9.4□□□□□ -0.9
PAF1-201ENST00000221265 LRP1BQ9NZR2 4599 aa9.39□□□□□ -0.91
PAF1-201ENST00000221265 BCE1O60756 84 aa9.39□□□□□ -0.91
PAF1-201ENST00000221265 PRLHP81277 87 aa9.38□□□□□ -0.91
PAF1-201ENST00000221265 SMIM20Q8N5G0 67 aa9.38□□□□□ -0.91
PAF1-201ENST00000221265 NREPQ16612 68 aa9.38□□□□□ -0.91
PAF1-201ENST00000221265 A0A1W2PNM2 257 aa9.37□□□□□ -0.91
PAF1-201ENST00000221265 DYNC1H1Q14204 4646 aaKnown RBP9.37□□□□□ -0.91
PAF1-201ENST00000221265 C1orf137Q5JT78 98 aa9.35□□□□□ -0.91
PAF1-201ENST00000221265 LINC00336Q6ZUF6 198 aa9.35□□□□□ -0.91
PAF1-201ENST00000221265 TRAV7A0A075B6U4 112 aa9.35□□□□□ -0.91
PAF1-201ENST00000221265 CIRBP-AS1Q8TBR5 109 aa9.35□□□□□ -0.91
PAF1-201ENST00000221265 Q6ZSA8 131 aa9.34□□□□□ -0.91
PAF1-201ENST00000221265 Q8N9L7 120 aa9.34□□□□□ -0.91
PAF1-201ENST00000221265 SMIM29Q86T20 159 aa9.33□□□□□ -0.92
PAF1-201ENST00000221265 A0A1B0GVY2 172 aa9.33□□□□□ -0.92
PAF1-201ENST00000221265 IGKV4-1P06312 121 aa9.32□□□□□ -0.92
PAF1-201ENST00000221265 A0A1B0GW54 56 aa9.32□□□□□ -0.92
PAF1-201ENST00000221265 C20orf197Q8N268 126 aa9.32□□□□□ -0.92
PAF1-201ENST00000221265 Q8NBF4 154 aa9.32□□□□□ -0.92
PAF1-201ENST00000221265 BPY2O14599 106 aa9.31□□□□□ -0.92
PAF1-201ENST00000221265 HIGD2AQ9BW72 106 aa9.31□□□□□ -0.92
PAF1-201ENST00000221265 PSORS1C2Q9UIG4 136 aa9.31□□□□□ -0.92
PAF1-201ENST00000221265 TMEM258P61165 79 aa9.3□□□□□ -0.92
PAF1-201ENST00000221265 SPRR4Q96PI1 79 aa9.3□□□□□ -0.92
PAF1-201ENST00000221265 UBE2AP49459 152 aa9.28□□□□□ -0.92
PAF1-201ENST00000221265 KRTAP13-1Q8IUC0 172 aa9.28□□□□□ -0.92
PAF1-201ENST00000221265 VPS13BQ7Z7G8 4022 aa9.27□□□□□ -0.93
PAF1-201ENST00000221265 H0Y9J4 135 aa9.26□□□□□ -0.93
PAF1-201ENST00000221265 APOBP04114 4563 aaKnown RBP9.25□□□□□ -0.93
PAF1-201ENST00000221265 A0A0G2JQZ4 141 aa9.25□□□□□ -0.93
PAF1-201ENST00000221265 F8WEM9 126 aa9.24□□□□□ -0.93
PAF1-201ENST00000221265 IGFL1Q6UW32 110 aa9.23□□□□□ -0.93
PAF1-201ENST00000221265 J3KT08 172 aa9.22□□□□□ -0.93
PAF1-201ENST00000221265 KLKP1Q107X0 134 aa9.22□□□□□ -0.93
PAF1-201ENST00000221265 IGLV8-61A0A075B6I0 122 aa9.22□□□□□ -0.93
PAF1-201ENST00000221265 RPS28P62857 69 aaKnown RBP9.22□□□□□ -0.93
PAF1-201ENST00000221265 SNURFQ9Y675 71 aa9.22□□□□□ -0.93
PAF1-201ENST00000221265 H7BZZ5 65 aa9.21□□□□□ -0.93
PAF1-201ENST00000221265 DSCR10P59022 87 aa9.19□□□□□ -0.94
PAF1-201ENST00000221265 OCR1Q9BZK8 76 aa9.19□□□□□ -0.94
PAF1-201ENST00000221265 FAT1Q14517 4588 aa9.17□□□□□ -0.94
PAF1-201ENST00000221265 ZNF861PO60384 105 aa9.17□□□□□ -0.94
PAF1-201ENST00000221265 IGLV7-43P04211 117 aa9.17□□□□□ -0.94
PAF1-201ENST00000221265 SPRR1BP22528 89 aa9.17□□□□□ -0.94
PAF1-201ENST00000221265 K7EQZ3 153 aa9.14□□□□□ -0.95
PAF1-201ENST00000221265 OXTP01178 125 aa9.14□□□□□ -0.95
PAF1-201ENST00000221265 FAM236DA0A1B0GTK5 79 aa9.14□□□□□ -0.95
PAF1-201ENST00000221265 FAM236CP0DP71 79 aa9.14□□□□□ -0.95
PAF1-201ENST00000221265 TMEM254Q8TBM7 123 aa9.14□□□□□ -0.95
PAF1-201ENST00000221265 A0A087WSZ3 146 aa9.13□□□□□ -0.95
PAF1-201ENST00000221265 SMR3BP02814 79 aaPredicted RBP9.11□□□□□ -0.95
PAF1-201ENST00000221265 ANAPC11Q9NYG5 84 aa9.11□□□□□ -0.95
PAF1-201ENST00000221265 DEFB116Q30KQ4 102 aa9.11□□□□□ -0.95
PAF1-201ENST00000221265 A0A0U1RQV1 116 aa9.09□□□□□ -0.95
PAF1-201ENST00000221265 NDUFC1O43677 76 aa9.09□□□□□ -0.95
PAF1-201ENST00000221265 EPPK1P58107 5090 aaKnown RBP9.07□□□□□ -0.96
PAF1-201ENST00000221265 LINC00483Q53H64 154 aa9.06□□□□□ -0.96
PAF1-201ENST00000221265 HCG22E2RYF7 251 aa9.06□□□□□ -0.96
PAF1-201ENST00000221265 HSPG2P98160 4391 aa9.05□□□□□ -0.96
PAF1-201ENST00000221265 ZNF706Q9Y5V0 76 aaPredicted RBP9.04□□□□□ -0.96
PAF1-201ENST00000221265 IGLV9-49A0A0B4J1Y8 123 aa9.04□□□□□ -0.96
PAF1-201ENST00000221265 RPL37AP61513 92 aaKnown RBP9.03□□□□□ -0.96
PAF1-201ENST00000221265 SERP1Q9Y6X1 66 aa9.03□□□□□ -0.96
PAF1-201ENST00000221265 LINC00472Q9H8W2 130 aa9.01□□□□□ -0.97
PAF1-201ENST00000221265 RYR1P21817 5038 aa8.99□□□□□ -0.97
PAF1-201ENST00000221265 WFDC13Q8IUB5 93 aa8.99□□□□□ -0.97
PAF1-201ENST00000221265 KRTAP10-4P60372 401 aaPredicted RBP8.98□□□□□ -0.97
PAF1-201ENST00000221265 KIAA1109Q2LD37 5005 aa8.98□□□□□ -0.97
PAF1-201ENST00000221265 ATP5EP56381 51 aaPredicted RBP8.98□□□□□ -0.97
PAF1-201ENST00000221265 MOBPQ13875 183 aa8.98□□□□□ -0.97
PAF1-201ENST00000221265 SVIPQ8NHG7 77 aa8.98□□□□□ -0.97
PAF1-201ENST00000221265 PRR15Q8IV56 129 aa8.97□□□□□ -0.97
PAF1-201ENST00000221265 KRTAP29-1A8MX34 341 aaPredicted RBP8.96□□□□□ -0.97
PAF1-201ENST00000221265 Q5XG85 94 aa8.96□□□□□ -0.98
PAF1-201ENST00000221265 ZCCHC13Q8WW36 166 aaKnown RBP8.96□□□□□ -0.98
PAF1-201ENST00000221265 A0A087X002 238 aa8.95□□□□□ -0.98
PAF1-201ENST00000221265 A8MWP4 228 aa8.95□□□□□ -0.98
PAF1-201ENST00000221265 KRTAP1-4P0C5Y4 121 aa8.95□□□□□ -0.98
PAF1-201ENST00000221265 C5orf47Q569G3 176 aa8.95□□□□□ -0.98
PAF1-201ENST00000221265 KRTAP13-2Q52LG2 175 aa8.92□□□□□ -0.98
PAF1-201ENST00000221265 C4orf26Q17RF5 130 aa8.91□□□□□ -0.98
PAF1-201ENST00000221265 SPINK6Q6UWN8 80 aa8.91□□□□□ -0.98
PAF1-201ENST00000221265 CASC2Q6XLA1 102 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms