RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 DNAH11Q96DT5 4516 aa10.6□□□□□ -0.71
RABGGTA-201ENST00000216840 HAMPP81172 84 aa10.6□□□□□ -0.71
RABGGTA-201ENST00000216840 A0A087WVE0 104 aa10.59□□□□□ -0.71
RABGGTA-201ENST00000216840 HYDINQ4G0P3 5121 aa10.59□□□□□ -0.71
RABGGTA-201ENST00000216840 HIST1H4AP62805 103 aaKnown RBP10.59□□□□□ -0.71
RABGGTA-201ENST00000216840 Q8NBF4 154 aa10.59□□□□□ -0.71
RABGGTA-201ENST00000216840 DNAH8Q96JB1 4490 aa10.58□□□□□ -0.72
RABGGTA-201ENST00000216840 DNAH5Q8TE73 4624 aa10.58□□□□□ -0.72
RABGGTA-201ENST00000216840 IGLV8-61A0A075B6I0 122 aa10.57□□□□□ -0.72
RABGGTA-201ENST00000216840 PSORS1C2Q9UIG4 136 aa10.57□□□□□ -0.72
RABGGTA-201ENST00000216840 A0A1B0GW54 56 aa10.57□□□□□ -0.72
RABGGTA-201ENST00000216840 CXCL6P80162 114 aa10.56□□□□□ -0.72
RABGGTA-201ENST00000216840 SRRM2Q9UQ35 2752 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-201ENST00000216840 SPRR4Q96PI1 79 aa10.56□□□□□ -0.72
RABGGTA-201ENST00000216840 IGFL1Q6UW32 110 aa10.55□□□□□ -0.72
RABGGTA-201ENST00000216840 NREPQ16612 68 aa10.54□□□□□ -0.72
RABGGTA-201ENST00000216840 A0A0G2JQZ4 141 aa10.54□□□□□ -0.72
RABGGTA-201ENST00000216840 SCXQ7RTU7 201 aa10.53□□□□□ -0.72
RABGGTA-201ENST00000216840 FAM30AQ9NZY2 134 aa10.53□□□□□ -0.72
RABGGTA-201ENST00000216840 FAT2Q9NYQ8 4349 aa10.52□□□□□ -0.72
RABGGTA-201ENST00000216840 PKD1P98161 4303 aa10.52□□□□□ -0.73
RABGGTA-201ENST00000216840 CRYGAP11844 174 aa10.51□□□□□ -0.73
RABGGTA-201ENST00000216840 ATOX1O00244 68 aa10.48□□□□□ -0.73
RABGGTA-201ENST00000216840 ZNF861PO60384 105 aa10.48□□□□□ -0.73
RABGGTA-201ENST00000216840 CIRBP-AS1Q8TBR5 109 aa10.48□□□□□ -0.73
RABGGTA-201ENST00000216840 KRTAP10-1P60331 282 aa10.47□□□□□ -0.73
RABGGTA-201ENST00000216840 CCDC179H3BU77 68 aa10.46□□□□□ -0.73
RABGGTA-201ENST00000216840 LINC00483Q53H64 154 aa10.46□□□□□ -0.74
RABGGTA-201ENST00000216840 Q6ZSA8 131 aa10.46□□□□□ -0.74
RABGGTA-201ENST00000216840 BPY2O14599 106 aa10.45□□□□□ -0.74
RABGGTA-201ENST00000216840 SACSQ9NZJ4 4579 aa10.45□□□□□ -0.74
RABGGTA-201ENST00000216840 ZNF706Q9Y5V0 76 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-201ENST00000216840 IGLV7-43P04211 117 aa10.43□□□□□ -0.74
RABGGTA-201ENST00000216840 Q8N9L7 120 aa10.42□□□□□ -0.74
RABGGTA-201ENST00000216840 LCE6AA0A183 80 aa10.4□□□□□ -0.74
RABGGTA-201ENST00000216840 IGKV4-1P06312 121 aa10.4□□□□□ -0.74
RABGGTA-201ENST00000216840 A0A087WSZ3 146 aa10.4□□□□□ -0.75
RABGGTA-201ENST00000216840 IGLV9-49A0A0B4J1Y8 123 aa10.38□□□□□ -0.75
RABGGTA-201ENST00000216840 COX7CP15954 63 aa10.38□□□□□ -0.75
RABGGTA-201ENST00000216840 UQCRQO14949 82 aa10.37□□□□□ -0.75
RABGGTA-201ENST00000216840 C9orf153Q5TBE3 101 aa10.37□□□□□ -0.75
RABGGTA-201ENST00000216840 SERP2Q8N6R1 65 aa10.36□□□□□ -0.75
RABGGTA-201ENST00000216840 ANAPC11Q9NYG5 84 aa10.36□□□□□ -0.75
RABGGTA-201ENST00000216840 DSCR10P59022 87 aa10.35□□□□□ -0.75
RABGGTA-201ENST00000216840 RPL37AP61513 92 aaKnown RBP10.34□□□□□ -0.75
RABGGTA-201ENST00000216840 LINC00336Q6ZUF6 198 aa10.31□□□□□ -0.76
RABGGTA-201ENST00000216840 MOBPQ13875 183 aa10.3□□□□□ -0.76
RABGGTA-201ENST00000216840 DEFB116Q30KQ4 102 aa10.3□□□□□ -0.76
RABGGTA-201ENST00000216840 LRP1BQ9NZR2 4599 aa10.3□□□□□ -0.76
RABGGTA-201ENST00000216840 K7EQZ3 153 aa10.29□□□□□ -0.76
RABGGTA-201ENST00000216840 LINC00472Q9H8W2 130 aa10.27□□□□□ -0.77
RABGGTA-201ENST00000216840 TRAV7A0A075B6U4 112 aa10.26□□□□□ -0.77
RABGGTA-201ENST00000216840 SMIM20Q8N5G0 67 aa10.26□□□□□ -0.77
RABGGTA-201ENST00000216840 HRCT1Q6UXD1 115 aa10.24□□□□□ -0.77
RABGGTA-201ENST00000216840 A0A1B0GVY2 172 aa10.24□□□□□ -0.77
RABGGTA-201ENST00000216840 PKHD1P08F94 4074 aa10.22□□□□□ -0.77
RABGGTA-201ENST00000216840 RYR2Q92736 4967 aa10.21□□□□□ -0.77
RABGGTA-201ENST00000216840 Q96NJ1 140 aa10.19□□□□□ -0.78
RABGGTA-201ENST00000216840 CYSTM1Q9H1C7 97 aa10.18□□□□□ -0.78
RABGGTA-201ENST00000216840 VPS13BQ7Z7G8 4022 aa10.18□□□□□ -0.78
RABGGTA-201ENST00000216840 DYNC1H1Q14204 4646 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-201ENST00000216840 OCR1Q9BZK8 76 aa10.18□□□□□ -0.78
RABGGTA-201ENST00000216840 SS18L2Q9UHA2 77 aa10.18□□□□□ -0.78
RABGGTA-201ENST00000216840 A8MWP4 228 aa10.17□□□□□ -0.78
RABGGTA-201ENST00000216840 HCG22E2RYF7 251 aa10.17□□□□□ -0.78
RABGGTA-201ENST00000216840 J3KT08 172 aa10.16□□□□□ -0.78
RABGGTA-201ENST00000216840 SSBP3-AS1Q7Z2R9 100 aa10.16□□□□□ -0.78
RABGGTA-201ENST00000216840 PRR15Q8IV56 129 aa10.16□□□□□ -0.78
RABGGTA-201ENST00000216840 A0A087X002 238 aa10.14□□□□□ -0.79
RABGGTA-201ENST00000216840 C20orf197Q8N268 126 aa10.14□□□□□ -0.79
RABGGTA-201ENST00000216840 FAM229BQ4G0N7 80 aa10.13□□□□□ -0.79
RABGGTA-201ENST00000216840 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
RABGGTA-201ENST00000216840 KRTAP1-4P0C5Y4 121 aa10.12□□□□□ -0.79
RABGGTA-201ENST00000216840 CD164Q04900 197 aa10.12□□□□□ -0.79
RABGGTA-201ENST00000216840 KMT2CQ8NEZ4 4911 aaKnown RBP10.11□□□□□ -0.79
RABGGTA-201ENST00000216840 WFDC13Q8IUB5 93 aa10.11□□□□□ -0.79
RABGGTA-201ENST00000216840 KRTAP29-1A8MX34 341 aaPredicted RBP10.09□□□□□ -0.79
RABGGTA-201ENST00000216840 NDUFB1O75438 58 aa10.07□□□□□ -0.8
RABGGTA-201ENST00000216840 KLKP1Q107X0 134 aa10.07□□□□□ -0.8
RABGGTA-201ENST00000216840 SMR3BP02814 79 aaPredicted RBP10.06□□□□□ -0.8
RABGGTA-201ENST00000216840 SNURFQ9Y675 71 aa10.06□□□□□ -0.8
RABGGTA-201ENST00000216840 CASC2Q6XLA1 102 aa10.05□□□□□ -0.8
RABGGTA-201ENST00000216840 APOBP04114 4563 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-201ENST00000216840 MMP24-AS1A0A0U1RRL7 71 aa10.04□□□□□ -0.8
RABGGTA-201ENST00000216840 SPINK6Q6UWN8 80 aa10.04□□□□□ -0.8
RABGGTA-201ENST00000216840 TMEM254Q8TBM7 123 aa10.04□□□□□ -0.8
RABGGTA-201ENST00000216840 PLA2G1BP04054 148 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-201ENST00000216840 TMEM258P61165 79 aa10.01□□□□□ -0.81
RABGGTA-201ENST00000216840 A0A1B0GVX0 72 aa10□□□□□ -0.81
RABGGTA-201ENST00000216840 ASB16-AS1Q495Z4 193 aa10□□□□□ -0.81
RABGGTA-201ENST00000216840 A0A0U1RQV1 116 aa10□□□□□ -0.81
RABGGTA-201ENST00000216840 CDK2AP2O75956 126 aa10□□□□□ -0.81
RABGGTA-201ENST00000216840 H7BZZ5 65 aa9.98□□□□□ -0.81
RABGGTA-201ENST00000216840 C8orf17Q9NRJ1 99 aa9.98□□□□□ -0.81
RABGGTA-201ENST00000216840 IGHV6-1A0A0B4J1U7 121 aa9.98□□□□□ -0.81
RABGGTA-201ENST00000216840 hDV103S1A0JD37 113 aa9.97□□□□□ -0.81
RABGGTA-201ENST00000216840 KRTAP10-4P60372 401 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-201ENST00000216840 Q5XG85 94 aa9.97□□□□□ -0.81
RABGGTA-201ENST00000216840 C5orf47Q569G3 176 aa9.95□□□□□ -0.82
RABGGTA-201ENST00000216840 TYMSOSQ8TAI1 123 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms