RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 Q6ZR54 194 aa10.2□□□□□ -0.78
ITGB4-201ENST00000200181 FASNP49327 2511 aaKnown RBP10.18□□□□□ -0.78
ITGB4-201ENST00000200181 Q5VSD8 79 aa10.17□□□□□ -0.78
ITGB4-201ENST00000200181 KRTAP1-5Q9BYS1 174 aa10.12□□□□□ -0.79
ITGB4-201ENST00000200181 CENPFP49454 3210 aa10.11□□□□□ -0.79
ITGB4-201ENST00000200181 USP24Q9UPU5 2620 aa10.11□□□□□ -0.79
ITGB4-201ENST00000200181 EP400Q96L91 3159 aa10.08□□□□□ -0.8
ITGB4-201ENST00000200181 KRTAP29-1A8MX34 341 aaPredicted RBP10.08□□□□□ -0.8
ITGB4-201ENST00000200181 KRTAP10-1P60331 282 aa10.08□□□□□ -0.8
ITGB4-201ENST00000200181 KRTAP25-1Q3LHN0 102 aa10.07□□□□□ -0.8
ITGB4-201ENST00000200181 PANO1I0J062 215 aa10.07□□□□□ -0.8
ITGB4-201ENST00000200181 MGAM2Q2M2H8 2515 aa10.05□□□□□ -0.8
ITGB4-201ENST00000200181 A6NN06 94 aa10.03□□□□□ -0.8
ITGB4-201ENST00000200181 KRTAP10-2P60368 255 aa10.01□□□□□ -0.81
ITGB4-201ENST00000200181 C20orf166-AS1Q96NR2 134 aa10□□□□□ -0.81
ITGB4-201ENST00000200181 A8MU10 97 aa9.98□□□□□ -0.81
ITGB4-201ENST00000200181 KRTAP4-16G5E9R7 235 aaPredicted RBP9.98□□□□□ -0.81
ITGB4-201ENST00000200181 NDUFAF8A1L188 74 aa9.97□□□□□ -0.81
ITGB4-201ENST00000200181 FLG2Q5D862 2391 aaPredicted RBP9.92□□□□□ -0.82
ITGB4-201ENST00000200181 PCNTO95613 3336 aa9.92□□□□□ -0.82
ITGB4-201ENST00000200181 A0A087X002 238 aa9.91□□□□□ -0.82
ITGB4-201ENST00000200181 NOTCH2NLQ7Z3S9 236 aa9.91□□□□□ -0.82
ITGB4-201ENST00000200181 LCE6AA0A183 80 aa9.9□□□□□ -0.82
ITGB4-201ENST00000200181 BPTFQ12830 3046 aa9.89□□□□□ -0.83
ITGB4-201ENST00000200181 A8MUU9 505 aa9.86□□□□□ -0.83
ITGB4-201ENST00000200181 UTRNP46939 3433 aa9.84□□□□□ -0.83
ITGB4-201ENST00000200181 HECTD1Q9ULT8 2610 aa9.82□□□□□ -0.84
ITGB4-201ENST00000200181 EPG5Q9HCE0 2579 aa9.77□□□□□ -0.85
ITGB4-201ENST00000200181 DNAH12Q6ZR08 3092 aa9.75□□□□□ -0.85
ITGB4-201ENST00000200181 RPS29P62273 56 aaKnown RBP9.74□□□□□ -0.85
ITGB4-201ENST00000200181 FLNAP21333 2647 aaKnown RBP9.7□□□□□ -0.86
ITGB4-201ENST00000200181 C10orf95Q9H7T3 257 aa9.69□□□□□ -0.86
ITGB4-201ENST00000200181 DMBT1Q9UGM3 2413 aaPredicted RBP9.67□□□□□ -0.86
ITGB4-201ENST00000200181 CEP350Q5VT06 3117 aa9.67□□□□□ -0.86
ITGB4-201ENST00000200181 KRTAP11-1Q8IUC1 163 aa9.66□□□□□ -0.86
ITGB4-201ENST00000200181 TNP1P09430 55 aa9.66□□□□□ -0.86
ITGB4-201ENST00000200181 ATRQ13535 2644 aa9.66□□□□□ -0.86
ITGB4-201ENST00000200181 FLNBO75369 2602 aaKnown RBP9.66□□□□□ -0.86
ITGB4-201ENST00000200181 ITPR3Q14573 2671 aa9.61□□□□□ -0.87
ITGB4-201ENST00000200181 MAST4O15021 2626 aa9.57□□□□□ -0.88
ITGB4-201ENST00000200181 KRTAP13-2Q52LG2 175 aa9.55□□□□□ -0.88
ITGB4-201ENST00000200181 STAB1Q9NY15 2570 aa9.54□□□□□ -0.88
ITGB4-201ENST00000200181 KRTAP7-1Q8IUC3 87 aa9.52□□□□□ -0.88
ITGB4-201ENST00000200181 NBEAL1Q6ZS30 2694 aa9.52□□□□□ -0.89
ITGB4-201ENST00000200181 PRRC2CQ9Y520 2896 aaKnown RBP9.5□□□□□ -0.89
ITGB4-201ENST00000200181 Q6ZRN7 208 aaPredicted RBP9.49□□□□□ -0.89
ITGB4-201ENST00000200181 KRTAP13-1Q8IUC0 172 aa9.46□□□□□ -0.89
ITGB4-201ENST00000200181 PP632Q6XCG6 107 aa9.41□□□□□ -0.9
ITGB4-201ENST00000200181 A0A0C4DFX4 3053 aa9.4□□□□□ -0.9
ITGB4-201ENST00000200181 HELZ2Q9BYK8 2649 aaKnown RBP9.36□□□□□ -0.91
ITGB4-201ENST00000200181 CFAP46Q8IYW2 2715 aa9.34□□□□□ -0.91
ITGB4-201ENST00000200181 AKAP13Q12802 2813 aa9.32□□□□□ -0.92
ITGB4-201ENST00000200181 STAB2Q8WWQ8 2551 aa9.31□□□□□ -0.92
ITGB4-201ENST00000200181 CHD6Q8TD26 2715 aa9.29□□□□□ -0.92
ITGB4-201ENST00000200181 KRTAP10-8P60410 259 aa9.28□□□□□ -0.92
ITGB4-201ENST00000200181 CENPEQ02224 2701 aa9.27□□□□□ -0.93
ITGB4-201ENST00000200181 C5orf42Q9H799 3197 aa9.23□□□□□ -0.93
ITGB4-201ENST00000200181 P0C880 135 aa9.22□□□□□ -0.93
ITGB4-201ENST00000200181 BRCA2P51587 3418 aa9.22□□□□□ -0.93
ITGB4-201ENST00000200181 UNC79Q9P2D8 2635 aa9.21□□□□□ -0.94
ITGB4-201ENST00000200181 H0YAA0 97 aa9.17□□□□□ -0.94
ITGB4-201ENST00000200181 TEX15Q9BXT5 2789 aa9.16□□□□□ -0.94
ITGB4-201ENST00000200181 GCN1Q92616 2671 aaKnown RBP9.16□□□□□ -0.94
ITGB4-201ENST00000200181 LAMA3Q16787 3333 aa9.14□□□□□ -0.95
ITGB4-201ENST00000200181 A0A1B0GVY2 172 aa9.12□□□□□ -0.95
ITGB4-201ENST00000200181 NOTCH1P46531 2555 aa9.12□□□□□ -0.95
ITGB4-201ENST00000200181 MKI67P46013 3256 aaKnown RBP9.08□□□□□ -0.96
ITGB4-201ENST00000200181 XP32Q5T750 250 aa9.08□□□□□ -0.96
ITGB4-201ENST00000200181 TEP1Q99973 2627 aaKnown RBP9.08□□□□□ -0.96
ITGB4-201ENST00000200181 LAMA2P24043 3122 aaKnown RBP9.04□□□□□ -0.96
ITGB4-201ENST00000200181 HTTP42858 3142 aa9.03□□□□□ -0.96
ITGB4-201ENST00000200181 DNAH14Q0VDD8 3507 aa8.97□□□□□ -0.97
ITGB4-201ENST00000200181 UNC80Q8N2C7 3258 aa8.95□□□□□ -0.98
ITGB4-201ENST00000200181 KRTAP1-4P0C5Y4 121 aa8.95□□□□□ -0.98
ITGB4-201ENST00000200181 CHD7Q9P2D1 2997 aa8.95□□□□□ -0.98
ITGB4-201ENST00000200181 CFAP54Q96N23 3096 aa8.95□□□□□ -0.98
ITGB4-201ENST00000200181 NBEAL2Q6ZNJ1 2754 aa8.95□□□□□ -0.98
ITGB4-201ENST00000200181 COL6A5A8TX70 2615 aa8.95□□□□□ -0.98
ITGB4-201ENST00000200181 PRO2289Q9P1D8 64 aa8.93□□□□□ -0.98
ITGB4-201ENST00000200181 KRTAP10-10P60014 251 aa8.91□□□□□ -0.98
ITGB4-201ENST00000200181 XIRP2A4UGR9 3374 aa8.9□□□□□ -0.98
ITGB4-201ENST00000200181 TPRXLQ17RH7 258 aa8.84□□□□□ -0.99
ITGB4-201ENST00000200181 CDH23Q9H251 3354 aa8.83□□□□□ -1
ITGB4-201ENST00000200181 SETXQ7Z333 2677 aaKnown RBP8.83□□□□□ -1
ITGB4-201ENST00000200181 RANBP2P49792 3224 aaKnown RBP8.78□□□□□ -1
ITGB4-201ENST00000200181 NSD1Q96L73 2696 aaPredicted RBP8.74□□□□□ -1.01
ITGB4-201ENST00000200181 BAHCC1Q9P281 2608 aa8.72□□□□□ -1.01
ITGB4-201ENST00000200181 MGAQ8IWI9 3026 aa8.72□□□□□ -1.01
ITGB4-201ENST00000200181 CHD9Q3L8U1 2897 aa8.7□□□□□ -1.02
ITGB4-201ENST00000200181 ZNF292O60281 2723 aa8.69□□□□□ -1.02
ITGB4-201ENST00000200181 MAP1AP78559 2803 aaPredicted RBP8.68□□□□□ -1.02
ITGB4-201ENST00000200181 KRTAP13-3Q3SY46 172 aa8.67□□□□□ -1.02
ITGB4-201ENST00000200181 SZT2Q5T011 3432 aa8.67□□□□□ -1.02
ITGB4-201ENST00000200181 VCANP13611 3396 aa8.67□□□□□ -1.02
ITGB4-201ENST00000200181 KRTAP21-3Q3LHN1 58 aa8.65□□□□□ -1.02
ITGB4-201ENST00000200181 UBR5O95071 2799 aaPredicted RBP8.63□□□□□ -1.03
ITGB4-201ENST00000200181 SPEGQ15772 3267 aa8.63□□□□□ -1.03
ITGB4-201ENST00000200181 KRTAP12-2P59991 146 aa8.62□□□□□ -1.03
ITGB4-201ENST00000200181 IGSF10Q6WRI0 2623 aa8.62□□□□□ -1.03
ITGB4-201ENST00000200181 ITPR2Q14571 2701 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms