RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 AKAP13Q12802 2813 aa14.19□□□□□ -0.14
TARBP1-201ENST00000040877 KRTAP26-1Q6PEX3 210 aa14.19□□□□□ -0.14
TARBP1-201ENST00000040877 Q75L30 129 aa14.17□□□□□ -0.14
TARBP1-201ENST00000040877 KRTAP1-5Q9BYS1 174 aa14.17□□□□□ -0.14
TARBP1-201ENST00000040877 HRES1P13985 223 aa14.16□□□□□ -0.14
TARBP1-201ENST00000040877 CHD6Q8TD26 2715 aa14.16□□□□□ -0.14
TARBP1-201ENST00000040877 ZCCHC13Q8WW36 166 aaKnown RBP14.16□□□□□ -0.14
TARBP1-201ENST00000040877 COL6A5A8TX70 2615 aa14.15□□□□□ -0.14
TARBP1-201ENST00000040877 LINC01554Q52M75 96 aa14.14□□□□□ -0.15
TARBP1-201ENST00000040877 UNC79Q9P2D8 2635 aa14.13□□□□□ -0.15
TARBP1-201ENST00000040877 SETXQ7Z333 2677 aaKnown RBP14.11□□□□□ -0.15
TARBP1-201ENST00000040877 Q8N9P0 234 aaPredicted RBP14.11□□□□□ -0.15
TARBP1-201ENST00000040877 LINC00472Q9H8W2 130 aa14.11□□□□□ -0.15
TARBP1-201ENST00000040877 MGAQ8IWI9 3026 aa14.1□□□□□ -0.15
TARBP1-201ENST00000040877 A0A0D9SG42 100 aa14.09□□□□□ -0.15
TARBP1-201ENST00000040877 LCE6AA0A183 80 aa14.08□□□□□ -0.16
TARBP1-201ENST00000040877 OXTP01178 125 aa14.07□□□□□ -0.16
TARBP1-201ENST00000040877 LINC01558Q9Y6Z2 57 aa14.03□□□□□ -0.16
TARBP1-201ENST00000040877 A0A1B0GU33 70 aa14□□□□□ -0.17
TARBP1-201ENST00000040877 PRUNE2Q8WUY3 3088 aa13.99□□□□□ -0.17
TARBP1-201ENST00000040877 Q5VV11 94 aa13.99□□□□□ -0.17
TARBP1-201ENST00000040877 NBEAL1Q6ZS30 2694 aa13.98□□□□□ -0.17
TARBP1-201ENST00000040877 IGSF10Q6WRI0 2623 aa13.97□□□□□ -0.17
TARBP1-201ENST00000040877 CSAG1Q6PB30 78 aa13.96□□□□□ -0.18
TARBP1-201ENST00000040877 NOTCH1P46531 2555 aa13.95□□□□□ -0.18
TARBP1-201ENST00000040877 KRTAP10-1P60331 282 aa13.95□□□□□ -0.18
TARBP1-201ENST00000040877 Q5W150 140 aa13.94□□□□□ -0.18
TARBP1-201ENST00000040877 LINC00483Q53H64 154 aa13.94□□□□□ -0.18
TARBP1-201ENST00000040877 PRAC1Q96KF2 57 aa13.93□□□□□ -0.18
TARBP1-201ENST00000040877 GCN1Q92616 2671 aaKnown RBP13.92□□□□□ -0.18
TARBP1-201ENST00000040877 Q5VSD8 79 aa13.91□□□□□ -0.18
TARBP1-201ENST00000040877 SEC61BP60468 96 aaKnown RBP13.89□□□□□ -0.19
TARBP1-201ENST00000040877 KRTAP10-2P60368 255 aa13.88□□□□□ -0.19
TARBP1-201ENST00000040877 Q6ZR54 194 aa13.88□□□□□ -0.19
TARBP1-201ENST00000040877 LAMA2P24043 3122 aaKnown RBP13.87□□□□□ -0.19
TARBP1-201ENST00000040877 SPINK7P58062 85 aa13.87□□□□□ -0.19
TARBP1-201ENST00000040877 M0R2T5 61 aa13.86□□□□□ -0.19
TARBP1-201ENST00000040877 CAMK2N1Q7Z7J9 78 aa13.86□□□□□ -0.19
TARBP1-201ENST00000040877 S4R3F8 94 aa13.86□□□□□ -0.19
TARBP1-201ENST00000040877 H3BS24 57 aa13.84□□□□□ -0.19
TARBP1-201ENST00000040877 BAHCC1Q9P281 2608 aa13.84□□□□□ -0.19
TARBP1-201ENST00000040877 KRTAP4-16G5E9R7 235 aaPredicted RBP13.83□□□□□ -0.19
TARBP1-201ENST00000040877 DSPP15924 2871 aaKnown RBP13.82□□□□□ -0.2
TARBP1-201ENST00000040877 DMAC1Q96GE9 116 aa13.81□□□□□ -0.2
TARBP1-201ENST00000040877 UNC80Q8N2C7 3258 aa13.8□□□□□ -0.2
TARBP1-201ENST00000040877 CFAP54Q96N23 3096 aa13.77□□□□□ -0.2
TARBP1-201ENST00000040877 WDFY4Q6ZS81 3184 aa13.72□□□□□ -0.21
TARBP1-201ENST00000040877 XIRP2A4UGR9 3374 aa13.71□□□□□ -0.21
TARBP1-201ENST00000040877 UBR5O95071 2799 aaPredicted RBP13.71□□□□□ -0.21
TARBP1-201ENST00000040877 PANO1I0J062 215 aa13.69□□□□□ -0.22
TARBP1-201ENST00000040877 LUZP6Q538Z0 58 aa13.67□□□□□ -0.22
TARBP1-201ENST00000040877 TRIOO75962 3097 aa13.66□□□□□ -0.22
TARBP1-201ENST00000040877 NSD1Q96L73 2696 aaPredicted RBP13.64□□□□□ -0.23
TARBP1-201ENST00000040877 R4GN34 69 aa13.6□□□□□ -0.23
TARBP1-201ENST00000040877 NBEAL2Q6ZNJ1 2754 aa13.57□□□□□ -0.24
TARBP1-201ENST00000040877 FLG2Q5D862 2391 aaPredicted RBP13.57□□□□□ -0.24
TARBP1-201ENST00000040877 ITPR2Q14571 2701 aa13.57□□□□□ -0.24
TARBP1-201ENST00000040877 KRTAP29-1A8MX34 341 aaPredicted RBP13.55□□□□□ -0.24
TARBP1-201ENST00000040877 MAP1AP78559 2803 aaPredicted RBP13.55□□□□□ -0.24
TARBP1-201ENST00000040877 Q6ZRN7 208 aaPredicted RBP13.55□□□□□ -0.24
TARBP1-201ENST00000040877 ASB16-AS1Q495Z4 193 aa13.53□□□□□ -0.24
TARBP1-201ENST00000040877 RPS29P62273 56 aaKnown RBP13.52□□□□□ -0.24
TARBP1-201ENST00000040877 A0A087X002 238 aa13.52□□□□□ -0.25
TARBP1-201ENST00000040877 CDH23Q9H251 3354 aa13.49□□□□□ -0.25
TARBP1-201ENST00000040877 STAB2Q8WWQ8 2551 aa13.49□□□□□ -0.25
TARBP1-201ENST00000040877 ITPR1Q14643 2758 aa13.44□□□□□ -0.26
TARBP1-201ENST00000040877 KRTAP21-3Q3LHN1 58 aa13.43□□□□□ -0.26
TARBP1-201ENST00000040877 RPL37P61927 97 aaKnown RBP13.41□□□□□ -0.26
TARBP1-201ENST00000040877 KMT2BQ9UMN6 2715 aaPredicted RBP13.4□□□□□ -0.26
TARBP1-201ENST00000040877 DMBT1Q9UGM3 2413 aaPredicted RBP13.39□□□□□ -0.27
TARBP1-201ENST00000040877 FLNCQ14315 2725 aa13.37□□□□□ -0.27
TARBP1-201ENST00000040877 VPS13AQ96RL7 3174 aa13.36□□□□□ -0.27
TARBP1-201ENST00000040877 H1FX-AS1Q4G0G2 97 aa13.34□□□□□ -0.27
TARBP1-201ENST00000040877 KRTAP11-1Q8IUC1 163 aa13.33□□□□□ -0.27
TARBP1-201ENST00000040877 M0QZ58 72 aa13.3□□□□□ -0.28
TARBP1-201ENST00000040877 KRTAP7-1Q8IUC3 87 aa13.3□□□□□ -0.28
TARBP1-201ENST00000040877 FRYQ5TBA9 3013 aa13.3□□□□□ -0.28
TARBP1-201ENST00000040877 KRTAP13-1Q8IUC0 172 aa13.27□□□□□ -0.29
TARBP1-201ENST00000040877 ROMO1P60602 79 aa13.23□□□□□ -0.29
TARBP1-201ENST00000040877 NOTCH2NLQ7Z3S9 236 aa13.23□□□□□ -0.29
TARBP1-201ENST00000040877 A6NN06 94 aa13.21□□□□□ -0.29
TARBP1-201ENST00000040877 A0A0A0MQY5 61 aa13.21□□□□□ -0.29
TARBP1-201ENST00000040877 SZT2Q5T011 3432 aa13.21□□□□□ -0.29
TARBP1-201ENST00000040877 ADM2Q7Z4H4 148 aa13.17□□□□□ -0.3
TARBP1-201ENST00000040877 KRTAP13-2Q52LG2 175 aa13.16□□□□□ -0.3
TARBP1-201ENST00000040877 HIVEP1P15822 2718 aa13.16□□□□□ -0.3
TARBP1-201ENST00000040877 SPATA8Q6RVD6 105 aa13.16□□□□□ -0.3
TARBP1-201ENST00000040877 PLAC4Q8WY50 150 aa13.1□□□□□ -0.31
TARBP1-201ENST00000040877 CELSR3Q9NYQ7 3312 aa13.09□□□□□ -0.31
TARBP1-201ENST00000040877 UTP20O75691 2785 aaKnown RBP13.06□□□□□ -0.32
TARBP1-201ENST00000040877 ATMQ13315 3056 aa13.06□□□□□ -0.32
TARBP1-201ENST00000040877 TACC2O95359 2948 aa13.05□□□□□ -0.32
TARBP1-201ENST00000040877 NIPBLQ6KC79 2804 aaeCLIP13.02□□□□□ -0.33
TARBP1-201ENST00000040877 VCANP13611 3396 aa13.01□□□□□ -0.33
TARBP1-201ENST00000040877 A8MU10 97 aa13.01□□□□□ -0.33
TARBP1-201ENST00000040877 LAMA1P25391 3075 aa13□□□□□ -0.33
TARBP1-201ENST00000040877 COL12A1Q99715 3063 aa12.99□□□□□ -0.33
TARBP1-201ENST00000040877 REV3LO60673 3130 aa12.98□□□□□ -0.33
TARBP1-201ENST00000040877 TENM4Q6N022 2769 aa12.96□□□□□ -0.34
TARBP1-201ENST00000040877 COL6A3P12111 3177 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms