RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 CDK2AP2O75956 126 aa10.86□□□□□ -0.67
PHGDH-230ENST00000641927 SMR3BP02814 79 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-230ENST00000641927 REG3GQ6UW15 175 aa10.86□□□□□ -0.67
PHGDH-230ENST00000641927 ZNF73O43830 326 aaPredicted RBP10.85□□□□□ -0.67
PHGDH-230ENST00000641927 NAA38Q9BRA0 125 aaKnown RBP10.85□□□□□ -0.67
PHGDH-230ENST00000641927 PSORS1C2Q9UIG4 136 aa10.85□□□□□ -0.67
PHGDH-230ENST00000641927 TSPAN13O95857 204 aa10.84□□□□□ -0.67
PHGDH-230ENST00000641927 C6orf99Q4VX62 202 aa10.83□□□□□ -0.68
PHGDH-230ENST00000641927 A0A1W2PPM0 123 aa10.82□□□□□ -0.68
PHGDH-230ENST00000641927 PSMB2P49721 201 aa10.82□□□□□ -0.68
PHGDH-230ENST00000641927 LINC00528Q8N1L1 170 aa10.82□□□□□ -0.68
PHGDH-230ENST00000641927 DIRC1Q969H9 104 aa10.82□□□□□ -0.68
PHGDH-230ENST00000641927 C1orf137Q5JT78 98 aa10.82□□□□□ -0.68
PHGDH-230ENST00000641927 ETDCA0A1B0GVM5 59 aa10.81□□□□□ -0.68
PHGDH-230ENST00000641927 RPL28P46779 137 aaKnown RBP10.81□□□□□ -0.68
PHGDH-230ENST00000641927 VAMP3Q15836 100 aa10.81□□□□□ -0.68
PHGDH-230ENST00000641927 FABP2P12104 132 aa10.8□□□□□ -0.68
PHGDH-230ENST00000641927 FAM19A1Q7Z5A9 133 aa10.8□□□□□ -0.68
PHGDH-230ENST00000641927 BCE1O60756 84 aa10.79□□□□□ -0.68
PHGDH-230ENST00000641927 SPRR1AP35321 89 aa10.79□□□□□ -0.68
PHGDH-230ENST00000641927 TRIAP1O43715 76 aa10.78□□□□□ -0.68
PHGDH-230ENST00000641927 UBE2AP49459 152 aa10.78□□□□□ -0.68
PHGDH-230ENST00000641927 RPL37AP61513 92 aaKnown RBP10.77□□□□□ -0.69
PHGDH-230ENST00000641927 COX7BP24311 80 aa10.76□□□□□ -0.69
PHGDH-230ENST00000641927 PRLHP81277 87 aa10.76□□□□□ -0.69
PHGDH-230ENST00000641927 UBE2V1Q13404 147 aa10.76□□□□□ -0.69
PHGDH-230ENST00000641927 KRTAP4-16G5E9R7 235 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-230ENST00000641927 LYRM7Q5U5X0 104 aa10.76□□□□□ -0.69
PHGDH-230ENST00000641927 B5MCH6 92 aa10.75□□□□□ -0.69
PHGDH-230ENST00000641927 COX6CP09669 75 aa10.75□□□□□ -0.69
PHGDH-230ENST00000641927 SCGB1C2P0DMR2 95 aa10.75□□□□□ -0.69
PHGDH-230ENST00000641927 SPCS1Q9Y6A9 102 aa10.75□□□□□ -0.69
PHGDH-230ENST00000641927 HSPG2P98160 4391 aa10.75□□□□□ -0.69
PHGDH-230ENST00000641927 FAM229AH3BQW9 127 aa10.74□□□□□ -0.69
PHGDH-230ENST00000641927 GTF2H5Q6ZYL4 71 aa10.74□□□□□ -0.69
PHGDH-230ENST00000641927 RYR1P21817 5038 aa10.74□□□□□ -0.69
PHGDH-230ENST00000641927 TRBV7-6A0A0J9YX20 115 aa10.73□□□□□ -0.69
PHGDH-230ENST00000641927 K7EP34 96 aa10.73□□□□□ -0.69
PHGDH-230ENST00000641927 ELOF1P60002 83 aaKnown RBP10.73□□□□□ -0.69
PHGDH-230ENST00000641927 Q6ZRX8 168 aa10.73□□□□□ -0.69
PHGDH-230ENST00000641927 KIAA1109Q2LD37 5005 aa10.73□□□□□ -0.69
PHGDH-230ENST00000641927 IGLV7-43P04211 117 aa10.73□□□□□ -0.69
PHGDH-230ENST00000641927 VPS13BQ7Z7G8 4022 aa10.72□□□□□ -0.69
PHGDH-230ENST00000641927 H0YGX0 51 aa10.71□□□□□ -0.69
PHGDH-230ENST00000641927 HIGD2AQ9BW72 106 aa10.71□□□□□ -0.69
PHGDH-230ENST00000641927 H0Y9J4 135 aa10.69□□□□□ -0.7
PHGDH-230ENST00000641927 PLA2G1BP04054 148 aaKnown RBP10.69□□□□□ -0.7
PHGDH-230ENST00000641927 Q5VSD8 79 aa10.69□□□□□ -0.7
PHGDH-230ENST00000641927 CLEC2BQ92478 149 aa10.69□□□□□ -0.7
PHGDH-230ENST00000641927 Q9BRP9 147 aa10.69□□□□□ -0.7
PHGDH-230ENST00000641927 TRBV20-1A0A075B6N2 111 aa10.68□□□□□ -0.7
PHGDH-230ENST00000641927 SLC25A20O43772 301 aa10.68□□□□□ -0.7
PHGDH-230ENST00000641927 ZNF861PO60384 105 aa10.68□□□□□ -0.7
PHGDH-230ENST00000641927 KRTAP13-1Q8IUC0 172 aa10.68□□□□□ -0.7
PHGDH-230ENST00000641927 BIRC6Q9NR09 4857 aa10.68□□□□□ -0.7
PHGDH-230ENST00000641927 FAT1Q14517 4588 aa10.67□□□□□ -0.7
PHGDH-230ENST00000641927 LINC00575Q6W349 94 aa10.67□□□□□ -0.7
PHGDH-230ENST00000641927 DHRS4-AS1Q9P1J3 65 aa10.67□□□□□ -0.7
PHGDH-230ENST00000641927 TCL1BO95988 128 aa10.66□□□□□ -0.7
PHGDH-230ENST00000641927 SMCR5Q8TEV8 140 aa10.66□□□□□ -0.7
PHGDH-230ENST00000641927 FAM218AQ96MZ4 157 aa10.66□□□□□ -0.7
PHGDH-230ENST00000641927 hADV29S1A0JD25 119 aa10.65□□□□□ -0.7
PHGDH-230ENST00000641927 SNCGO76070 127 aa10.65□□□□□ -0.7
PHGDH-230ENST00000641927 INAFM2P0DMQ5 153 aa10.64□□□□□ -0.71
PHGDH-230ENST00000641927 Q8N1X5 172 aa10.64□□□□□ -0.71
PHGDH-230ENST00000641927 H3BMG7 143 aa10.63□□□□□ -0.71
PHGDH-230ENST00000641927 ERC2-IT1O76042 136 aa10.63□□□□□ -0.71
PHGDH-230ENST00000641927 KRTAP10-4P60372 401 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-230ENST00000641927 ATXN8Q156A1 80 aa10.62□□□□□ -0.71
PHGDH-230ENST00000641927 KRTAP17-1Q9BYP8 105 aa10.62□□□□□ -0.71
PHGDH-230ENST00000641927 LST1O00453 97 aa10.6□□□□□ -0.71
PHGDH-230ENST00000641927 DNAL4O96015 105 aa10.6□□□□□ -0.71
PHGDH-230ENST00000641927 SPINK6Q6UWN8 80 aa10.59□□□□□ -0.71
PHGDH-230ENST00000641927 A0A1B0GX51 115 aa10.58□□□□□ -0.72
PHGDH-230ENST00000641927 Q6ZQY7 126 aa10.58□□□□□ -0.72
PHGDH-230ENST00000641927 ST20-AS1Q8NBB2 130 aa10.58□□□□□ -0.72
PHGDH-230ENST00000641927 SRRM2Q9UQ35 2752 aaKnown RBP10.58□□□□□ -0.72
PHGDH-230ENST00000641927 DEFB105AQ8NG35 78 aa10.57□□□□□ -0.72
PHGDH-230ENST00000641927 F8W1H4 67 aa10.56□□□□□ -0.72
PHGDH-230ENST00000641927 TRACP01848 142 aa10.56□□□□□ -0.72
PHGDH-230ENST00000641927 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-230ENST00000641927 ZNF706Q9Y5V0 76 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-230ENST00000641927 GAGE2AQ6NT46 116 aa10.54□□□□□ -0.72
PHGDH-230ENST00000641927 PRO0461Q9UI25 63 aa10.53□□□□□ -0.72
PHGDH-230ENST00000641927 SPRR4Q96PI1 79 aa10.53□□□□□ -0.72
PHGDH-230ENST00000641927 C9JAW5 83 aa10.52□□□□□ -0.73
PHGDH-230ENST00000641927 OCIAD2Q56VL3 154 aa10.52□□□□□ -0.73
PHGDH-230ENST00000641927 MTURNQ8N3F0 131 aa10.52□□□□□ -0.73
PHGDH-230ENST00000641927 ORMDL1Q9P0S3 153 aa10.5□□□□□ -0.73
PHGDH-230ENST00000641927 ANAPC11Q9NYG5 84 aa10.5□□□□□ -0.73
PHGDH-230ENST00000641927 TEX49A0A1B0GTD5 131 aa10.49□□□□□ -0.73
PHGDH-230ENST00000641927 IGLV5-48A0A075B6I7 105 aa10.48□□□□□ -0.73
PHGDH-230ENST00000641927 GHRHP01286 108 aa10.47□□□□□ -0.73
PHGDH-230ENST00000641927 SMCPP49901 116 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-230ENST00000641927 LINC01547P58512 204 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-230ENST00000641927 Q8N377 158 aa10.47□□□□□ -0.73
PHGDH-230ENST00000641927 K7ERU9 68 aa10.47□□□□□ -0.73
PHGDH-230ENST00000641927 KRTAP4-5Q9BYR2 181 aa10.47□□□□□ -0.73
PHGDH-230ENST00000641927 HERC2O95714 4834 aa10.46□□□□□ -0.74
PHGDH-230ENST00000641927 PKHD1L1Q86WI1 4243 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms