RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	NAT8	Q9UHE5	227 aa		3.87	□□□□□ -1.79
CASC19-238	ENST00000641523	LINC00959	A0A1B0GUT2	108 aa		3.86	□□□□□ -1.79
CASC19-238	ENST00000641523	POLR2K	P53803	58 aa	Known RBP	3.86	□□□□□ -1.79
CASC19-238	ENST00000641523	PEA15	Q15121	130 aa		3.86	□□□□□ -1.79
CASC19-238	ENST00000641523	AMN1	Q8IY45	258 aa		3.86	□□□□□ -1.79
CASC19-238	ENST00000641523	C20orf78	Q9BR46	151 aa		3.86	□□□□□ -1.79
CASC19-238	ENST00000641523	CDC42SE2	Q9NRR3	84 aa		3.86	□□□□□ -1.79
CASC19-238	ENST00000641523		V9GYV3	84 aa		3.86	□□□□□ -1.79
CASC19-238	ENST00000641523	PANO1	I0J062	215 aa		3.85	□□□□□ -1.79
CASC19-238	ENST00000641523		M0R378	163 aa		3.85	□□□□□ -1.79
CASC19-238	ENST00000641523	KRTAP5-9	P26371	169 aa		3.85	□□□□□ -1.79
CASC19-238	ENST00000641523	COX6A2	Q02221	97 aa		3.85	□□□□□ -1.79
CASC19-238	ENST00000641523	ADIRF	Q15847	76 aa		3.85	□□□□□ -1.79
CASC19-238	ENST00000641523	TIMM21	Q9BVV7	248 aa		3.85	□□□□□ -1.79
CASC19-238	ENST00000641523	IGKV2-24	A0A0C4DH68	120 aa		3.85	□□□□□ -1.79
CASC19-238	ENST00000641523	SMIM27	A0A1W2PRY6	76 aa		3.85	□□□□□ -1.79
CASC19-238	ENST00000641523	CKS2	P33552	79 aa		3.85	□□□□□ -1.79
CASC19-238	ENST00000641523	FAM104B	Q5XKR9	115 aa		3.85	□□□□□ -1.79
CASC19-238	ENST00000641523	FAT3	Q8TDW7	4589 aa		3.84	□□□□□ -1.79
CASC19-238	ENST00000641523	TRBV24-1	A0A075B6N3	115 aa		3.84	□□□□□ -1.8
CASC19-238	ENST00000641523	C20orf202	A1L168	122 aa		3.84	□□□□□ -1.8
CASC19-238	ENST00000641523		K7ERS5	55 aa		3.84	□□□□□ -1.8
CASC19-238	ENST00000641523	AKR1D1	P51857	326 aa		3.84	□□□□□ -1.8
CASC19-238	ENST00000641523	HBB	P68871	147 aa		3.84	□□□□□ -1.8
CASC19-238	ENST00000641523	IGLV4-69	A0A075B6H9	119 aa		3.83	□□□□□ -1.8
CASC19-238	ENST00000641523	TMEM223	A0PJW6	202 aa		3.83	□□□□□ -1.8
CASC19-238	ENST00000641523		J3QR89	54 aa		3.83	□□□□□ -1.8
CASC19-238	ENST00000641523	TSPEAR-AS2	P59090	65 aa		3.83	□□□□□ -1.8
CASC19-238	ENST00000641523	MRPL51	Q4U2R6	128 aa	Known RBP	3.83	□□□□□ -1.8
CASC19-238	ENST00000641523	UBE2D4	Q9Y2X8	147 aa		3.83	□□□□□ -1.8
CASC19-238	ENST00000641523	UBR4	Q5T4S7	5183 aa		3.82	□□□□□ -1.8
CASC19-238	ENST00000641523		A0A096LNI7	61 aa		3.82	□□□□□ -1.8
CASC19-238	ENST00000641523	TRAV13-1	A0A0B4J241	112 aa		3.82	□□□□□ -1.8
CASC19-238	ENST00000641523	KRTAP10-12	P60413	245 aa		3.82	□□□□□ -1.8
CASC19-238	ENST00000641523	SMIM2	Q9BVW6	85 aa		3.82	□□□□□ -1.8
CASC19-238	ENST00000641523		A0A1B0GW54	56 aa		3.81	□□□□□ -1.8
CASC19-238	ENST00000641523		A6NED7	52 aa		3.81	□□□□□ -1.8
CASC19-238	ENST00000641523		A8MWP4	228 aa		3.81	□□□□□ -1.8
CASC19-238	ENST00000641523		D6R8Y8	96 aa		3.81	□□□□□ -1.8
CASC19-238	ENST00000641523	MRPS36	P82909	103 aa	Known RBP	3.81	□□□□□ -1.8
CASC19-238	ENST00000641523	PKHD1L1	Q86WI1	4243 aa		3.81	□□□□□ -1.8
CASC19-238	ENST00000641523	TMEM256-PLSCR3	K7ERE1	68 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	FABP2	P12104	132 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	LGALS3	P17931	250 aa	Known RBP	3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	IFI27	P40305	119 aa	Predicted RBP	3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	SPAG11B	Q08648	103 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	LINC01554	Q52M75	96 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	MRPL54	Q6P161	138 aa	Known RBP	3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	SPINK6	Q6UWN8	80 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523		Q6ZUT4	128 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	BRK1	Q8WUW1	75 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	IMMP2L	Q96T52	175 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	NAA38	Q9BRA0	125 aa	Known RBP	3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	TTTY13	Q9BZ97	58 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523		K7EMI3	77 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	NDUFA1	O15239	70 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	LEPROT	O15243	131 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	TMEM136	Q6ZRR5	245 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	C3orf22	Q8N5N4	141 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	LINC00526	Q96FQ7	95 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	PRELID3A	Q96N28	172 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	CST9L	Q9H4G1	147 aa		3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	MRPL35	Q9NZE8	188 aa	Known RBP	3.8	□□□□□ -1.8
CASC19-238	ENST00000641523	TRBV7-6	A0A0J9YX20	115 aa		3.79	□□□□□ -1.8
CASC19-238	ENST00000641523	NPY	P01303	97 aa		3.79	□□□□□ -1.8
CASC19-238	ENST00000641523	MT1HL1	P0DM35	61 aa		3.79	□□□□□ -1.8
CASC19-238	ENST00000641523	RPL39	P62891	51 aa	Known RBP	3.79	□□□□□ -1.8
CASC19-238	ENST00000641523	C5orf38	Q86SI9	138 aa		3.79	□□□□□ -1.8
CASC19-238	ENST00000641523	LINC01600	Q96MT4	127 aa		3.79	□□□□□ -1.8
CASC19-238	ENST00000641523		A0A1B0GVG6	124 aa		3.78	□□□□□ -1.8
CASC19-238	ENST00000641523	TMEM141	Q96I45	108 aa		3.78	□□□□□ -1.8
CASC19-238	ENST00000641523	MT-ND6	P03923	174 aa		3.77	□□□□□ -1.81
CASC19-238	ENST00000641523	NDUFA6	P56556	154 aa		3.77	□□□□□ -1.81
CASC19-238	ENST00000641523	SEC11A	P67812	179 aa		3.77	□□□□□ -1.81
CASC19-238	ENST00000641523	C9orf116	Q5BN46	136 aa	Predicted RBP	3.77	□□□□□ -1.81
CASC19-238	ENST00000641523	MIR7-3HG	Q8N6C7	128 aa		3.77	□□□□□ -1.81
CASC19-238	ENST00000641523	NXT2	Q9NPJ8	142 aa	Known RBP	3.77	□□□□□ -1.81
CASC19-238	ENST00000641523	TRBV30	A0A0K0K1B3	111 aa		3.76	□□□□□ -1.81
CASC19-238	ENST00000641523	LINC01549	A6NIU2	74 aa		3.76	□□□□□ -1.81
CASC19-238	ENST00000641523	SLC25A20	O43772	301 aa		3.76	□□□□□ -1.81
CASC19-238	ENST00000641523	UBE2B	P63146	152 aa		3.76	□□□□□ -1.81
CASC19-238	ENST00000641523	C10orf91	Q5T1B1	145 aa		3.76	□□□□□ -1.81
CASC19-238	ENST00000641523		Q8N8P6	123 aa		3.76	□□□□□ -1.81
CASC19-238	ENST00000641523	LRP2	P98164	4655 aa		3.76	□□□□□ -1.81
CASC19-238	ENST00000641523		H3BMG7	143 aa		3.76	□□□□□ -1.81
CASC19-238	ENST00000641523	DIRC1	Q969H9	104 aa		3.76	□□□□□ -1.81
CASC19-238	ENST00000641523	FAM236A	A0A1B0GUQ0	79 aa		3.75	□□□□□ -1.81
CASC19-238	ENST00000641523	FAM236B	A0A1B0GV22	79 aa		3.75	□□□□□ -1.81
CASC19-238	ENST00000641523		A0A1W2PNN7	141 aa		3.75	□□□□□ -1.81
CASC19-238	ENST00000641523	PHF5A	Q7RTV0	110 aa	Known RBP	3.75	□□□□□ -1.81
CASC19-238	ENST00000641523	PSORS1C2	Q9UIG4	136 aa		3.75	□□□□□ -1.81
CASC19-238	ENST00000641523	TNXB	P22105	4242 aa		3.75	□□□□□ -1.81
CASC19-238	ENST00000641523		K7ERJ3	54 aa		3.74	□□□□□ -1.81
CASC19-238	ENST00000641523	UBE2D1	P51668	147 aa		3.74	□□□□□ -1.81
CASC19-238	ENST00000641523	C1orf137	Q5JT78	98 aa		3.74	□□□□□ -1.81
CASC19-238	ENST00000641523	LCE3C	Q5T5A8	94 aa		3.74	□□□□□ -1.81
CASC19-238	ENST00000641523	UNQ6190/PRO20217	Q6UXQ8	127 aa		3.74	□□□□□ -1.81
CASC19-238	ENST00000641523	C6orf48	Q9UBA6	75 aa		3.74	□□□□□ -1.81
CASC19-238	ENST00000641523	CLLU1	Q5K131	121 aa		3.73	□□□□□ -1.81
CASC19-238	ENST00000641523		Q8IZM0	81 aa		3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms