RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 NCR3O14931 201 aa5.63□□□□□ -1.51
SCARB2-225ENST00000640900 TMEM126AQ9H061 195 aa5.63□□□□□ -1.51
SCARB2-225ENST00000640900 TRAV13-2A0A0B4J235 113 aa5.62□□□□□ -1.51
SCARB2-225ENST00000640900 RPL37AP8A6NKH3 93 aa5.62□□□□□ -1.51
SCARB2-225ENST00000640900 PSORS1C2Q9UIG4 136 aa5.62□□□□□ -1.51
SCARB2-225ENST00000640900 SRRM2Q9UQ35 2752 aaKnown RBP5.62□□□□□ -1.51
SCARB2-225ENST00000640900 GAGE10A6NGK3 116 aa5.61□□□□□ -1.51
SCARB2-225ENST00000640900 PRYO14603 147 aa5.61□□□□□ -1.51
SCARB2-225ENST00000640900 KRTAP13-1Q8IUC0 172 aa5.61□□□□□ -1.51
SCARB2-225ENST00000640900 M0R143 59 aa5.6□□□□□ -1.51
SCARB2-225ENST00000640900 TRBV7-6A0A0J9YX20 115 aa5.59□□□□□ -1.51
SCARB2-225ENST00000640900 H0Y9J4 135 aa5.59□□□□□ -1.51
SCARB2-225ENST00000640900 SMR3BP02814 79 aaPredicted RBP5.59□□□□□ -1.51
SCARB2-225ENST00000640900 HINT1P49773 126 aaPredicted RBP5.59□□□□□ -1.51
SCARB2-225ENST00000640900 S100A7L2Q5SY68 101 aa5.59□□□□□ -1.51
SCARB2-225ENST00000640900 REG3GQ6UW15 175 aa5.59□□□□□ -1.51
SCARB2-225ENST00000640900 Q8N1X5 172 aa5.59□□□□□ -1.51
SCARB2-225ENST00000640900 KRTAP4-8Q9BYQ9 185 aa5.59□□□□□ -1.51
SCARB2-225ENST00000640900 PRO1854Q9UHT4 67 aa5.59□□□□□ -1.51
SCARB2-225ENST00000640900 CBY1Q9Y3M2 126 aa5.59□□□□□ -1.51
SCARB2-225ENST00000640900 TRAV23DV6A0A075B6W5 121 aa5.58□□□□□ -1.52
SCARB2-225ENST00000640900 BCE1O60756 84 aa5.58□□□□□ -1.52
SCARB2-225ENST00000640900 RPL28P46779 137 aaKnown RBP5.58□□□□□ -1.52
SCARB2-225ENST00000640900 UBE2BP63146 152 aa5.58□□□□□ -1.52
SCARB2-225ENST00000640900 SMIM11BQ8TCY0 68 aa5.58□□□□□ -1.52
SCARB2-225ENST00000640900 NHP2Q9NX24 153 aaKnown RBP5.58□□□□□ -1.52
SCARB2-225ENST00000640900 A6NDN8 102 aa5.57□□□□□ -1.52
SCARB2-225ENST00000640900 K7ERJ3 54 aa5.57□□□□□ -1.52
SCARB2-225ENST00000640900 ZNF73O43830 326 aaPredicted RBP5.57□□□□□ -1.52
SCARB2-225ENST00000640900 RPL13AP40429 203 aaKnown RBP5.57□□□□□ -1.52
SCARB2-225ENST00000640900 OR13C6PQ8NH95 151 aa5.57□□□□□ -1.52
SCARB2-225ENST00000640900 SNHG12Q9BXW3 62 aa5.57□□□□□ -1.52
SCARB2-225ENST00000640900 B5MCH6 92 aa5.56□□□□□ -1.52
SCARB2-225ENST00000640900 IGLV7-43P04211 117 aa5.56□□□□□ -1.52
SCARB2-225ENST00000640900 RPL37AP61513 92 aaKnown RBP5.56□□□□□ -1.52
SCARB2-225ENST00000640900 RAB37Q96AX2 223 aa5.56□□□□□ -1.52
SCARB2-225ENST00000640900 FAT3Q8TDW7 4589 aa5.56□□□□□ -1.52
SCARB2-225ENST00000640900 ELOF1P60002 83 aaKnown RBP5.55□□□□□ -1.52
SCARB2-225ENST00000640900 C6orf99Q4VX62 202 aa5.55□□□□□ -1.52
SCARB2-225ENST00000640900 C1orf137Q5JT78 98 aa5.55□□□□□ -1.52
SCARB2-225ENST00000640900 ZNF861PO60384 105 aa5.54□□□□□ -1.52
SCARB2-225ENST00000640900 TSPAN13O95857 204 aa5.54□□□□□ -1.52
SCARB2-225ENST00000640900 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
SCARB2-225ENST00000640900 Q5VSD8 79 aa5.54□□□□□ -1.52
SCARB2-225ENST00000640900 Q6ZRX8 168 aa5.54□□□□□ -1.52
SCARB2-225ENST00000640900 DIRC1Q969H9 104 aa5.54□□□□□ -1.52
SCARB2-225ENST00000640900 Q9BRP9 147 aa5.54□□□□□ -1.52
SCARB2-225ENST00000640900 PLA2G1BP04054 148 aaKnown RBP5.53□□□□□ -1.52
SCARB2-225ENST00000640900 INAFM2P0DMQ5 153 aa5.53□□□□□ -1.52
SCARB2-225ENST00000640900 TRIAP1O43715 76 aa5.52□□□□□ -1.53
SCARB2-225ENST00000640900 SMCR5Q8TEV8 140 aa5.52□□□□□ -1.53
SCARB2-225ENST00000640900 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
SCARB2-225ENST00000640900 LRP1Q07954 4544 aaKnown RBP5.52□□□□□ -1.53
SCARB2-225ENST00000640900 TNXBP22105 4242 aa5.51□□□□□ -1.53
SCARB2-225ENST00000640900 ETDCA0A1B0GVM5 59 aa5.51□□□□□ -1.53
SCARB2-225ENST00000640900 PCP4L1A6NKN8 68 aa5.51□□□□□ -1.53
SCARB2-225ENST00000640900 TAX1BP3O14907 124 aa5.51□□□□□ -1.53
SCARB2-225ENST00000640900 COX7BP24311 80 aa5.51□□□□□ -1.53
SCARB2-225ENST00000640900 PRLHP81277 87 aa5.51□□□□□ -1.53
SCARB2-225ENST00000640900 SPINK6Q6UWN8 80 aa5.51□□□□□ -1.53
SCARB2-225ENST00000640900 FAM19A1Q7Z5A9 133 aa5.51□□□□□ -1.53
SCARB2-225ENST00000640900 MYCBP2O75592 4640 aa5.51□□□□□ -1.53
SCARB2-225ENST00000640900 H0YGX0 51 aa5.5□□□□□ -1.53
SCARB2-225ENST00000640900 H7C2G1 150 aa5.5□□□□□ -1.53
SCARB2-225ENST00000640900 LINC00575Q6W349 94 aa5.5□□□□□ -1.53
SCARB2-225ENST00000640900 ABCA13Q86UQ4 5058 aa5.49□□□□□ -1.53
SCARB2-225ENST00000640900 ERC2-IT1O76042 136 aa5.49□□□□□ -1.53
SCARB2-225ENST00000640900 UBE2AP49459 152 aa5.49□□□□□ -1.53
SCARB2-225ENST00000640900 BATFQ16520 125 aa5.49□□□□□ -1.53
SCARB2-225ENST00000640900 DHRS4-AS1Q9P1J3 65 aa5.49□□□□□ -1.53
SCARB2-225ENST00000640900 A0A1B0GX51 115 aa5.48□□□□□ -1.53
SCARB2-225ENST00000640900 C9orf118A6NHY6 69 aa5.48□□□□□ -1.53
SCARB2-225ENST00000640900 KRTAP1-4P0C5Y4 121 aa5.48□□□□□ -1.53
SCARB2-225ENST00000640900 VAMP3Q15836 100 aa5.48□□□□□ -1.53
SCARB2-225ENST00000640900 COL5A1-AS1Q5SY13 56 aa5.48□□□□□ -1.53
SCARB2-225ENST00000640900 FAM218AQ96MZ4 157 aa5.48□□□□□ -1.53
SCARB2-225ENST00000640900 Q1RN00 199 aa5.47□□□□□ -1.53
SCARB2-225ENST00000640900 LINC00483Q53H64 154 aa5.47□□□□□ -1.53
SCARB2-225ENST00000640900 IGLV5-48A0A075B6I7 105 aa5.46□□□□□ -1.54
SCARB2-225ENST00000640900 SPRR1BP22528 89 aa5.46□□□□□ -1.54
SCARB2-225ENST00000640900 LINC01547P58512 204 aaPredicted RBP5.46□□□□□ -1.54
SCARB2-225ENST00000640900 HIGD2AQ9BW72 106 aa5.46□□□□□ -1.54
SCARB2-225ENST00000640900 hADV29S1A0JD25 119 aa5.45□□□□□ -1.54
SCARB2-225ENST00000640900 COX6CP09669 75 aa5.45□□□□□ -1.54
SCARB2-225ENST00000640900 SPRR4Q96PI1 79 aa5.45□□□□□ -1.54
SCARB2-225ENST00000640900 KRTAP9-2Q9BYQ4 174 aa5.45□□□□□ -1.54
SCARB2-225ENST00000640900 FLG2Q5D862 2391 aaPredicted RBP5.45□□□□□ -1.54
SCARB2-225ENST00000640900 A0A1W2PPM0 123 aa5.44□□□□□ -1.54
SCARB2-225ENST00000640900 H3BUT2 72 aa5.44□□□□□ -1.54
SCARB2-225ENST00000640900 LST1O00453 97 aa5.44□□□□□ -1.54
SCARB2-225ENST00000640900 PSMB2P49721 201 aa5.44□□□□□ -1.54
SCARB2-225ENST00000640900 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
SCARB2-225ENST00000640900 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.44□□□□□ -1.54
SCARB2-225ENST00000640900 CLEC2BQ92478 149 aa5.44□□□□□ -1.54
SCARB2-225ENST00000640900 NAA38Q9BRA0 125 aaKnown RBP5.44□□□□□ -1.54
SCARB2-225ENST00000640900 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
SCARB2-225ENST00000640900 TRACP01848 142 aa5.43□□□□□ -1.54
SCARB2-225ENST00000640900 FAM229BQ4G0N7 80 aa5.43□□□□□ -1.54
SCARB2-225ENST00000640900 ST20-AS1Q8NBB2 130 aa5.43□□□□□ -1.54
SCARB2-225ENST00000640900 KRTAP4-12Q9BQ66 201 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms