RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 KRTAP12-4P60329 112 aa1.34□□□□□ -2.19
CHRNA4-220ENST00000637628 Q8IZM0 81 aa1.34□□□□□ -2.19
CHRNA4-220ENST00000637628 KRTAP4-7Q9BYR0 210 aa1.34□□□□□ -2.19
CHRNA4-220ENST00000637628 PRO3102Q9H379 93 aa1.34□□□□□ -2.19
CHRNA4-220ENST00000637628 C4AP0C0L4 1744 aa1.34□□□□□ -2.2
CHRNA4-220ENST00000637628 C4BP0C0L5 1744 aa1.34□□□□□ -2.2
CHRNA4-220ENST00000637628 CDC42BPAQ5VT25 1732 aa1.34□□□□□ -2.2
CHRNA4-220ENST00000637628 CACNA1AO00555 2505 aa1.33□□□□□ -2.2
CHRNA4-220ENST00000637628 KRTAP4-5Q9BYR2 181 aa1.33□□□□□ -2.2
CHRNA4-220ENST00000637628 C10orf95Q9H7T3 257 aa1.33□□□□□ -2.2
CHRNA4-220ENST00000637628 TMEM167BQ9NRX6 74 aa1.33□□□□□ -2.2
CHRNA4-220ENST00000637628 CACNA1EQ15878 2313 aa1.32□□□□□ -2.2
CHRNA4-220ENST00000637628 SORL1Q92673 2214 aa1.31□□□□□ -2.2
CHRNA4-220ENST00000637628 COL6A6A6NMZ7 2263 aa1.31□□□□□ -2.2
CHRNA4-220ENST00000637628 APLNQ9ULZ1 77 aa1.31□□□□□ -2.2
CHRNA4-220ENST00000637628 PLCE1Q9P212 2302 aa1.31□□□□□ -2.2
CHRNA4-220ENST00000637628 RP1L1Q8IWN7 2480 aaPredicted RBP1.3□□□□□ -2.2
CHRNA4-220ENST00000637628 IQGAP1P46940 1657 aa1.3□□□□□ -2.2
CHRNA4-220ENST00000637628 LOC730098B7Z3J9 87 aa1.3□□□□□ -2.2
CHRNA4-220ENST00000637628 OTOGLQ3ZCN5 2332 aa1.3□□□□□ -2.2
CHRNA4-220ENST00000637628 FAM208BQ5VWN6 2430 aa1.3□□□□□ -2.2
CHRNA4-220ENST00000637628 ANKRD17O75179 2603 aaKnown RBP1.29□□□□□ -2.2
CHRNA4-220ENST00000637628 LINC00308Q8TCZ7 52 aa1.29□□□□□ -2.2
CHRNA4-220ENST00000637628 FBN1P35555 2871 aaKnown RBP1.29□□□□□ -2.2
CHRNA4-220ENST00000637628 CNOT1A5YKK6 2376 aaKnown RBP1.28□□□□□ -2.2
CHRNA4-220ENST00000637628 BPTFQ12830 3046 aa1.28□□□□□ -2.2
CHRNA4-220ENST00000637628 LELP1Q5T871 98 aa1.28□□□□□ -2.2
CHRNA4-220ENST00000637628 MINOS1Q5TGZ0 78 aa1.28□□□□□ -2.2
CHRNA4-220ENST00000637628 ATP7AQ04656 1500 aa1.28□□□□□ -2.2
CHRNA4-220ENST00000637628 LMO7Q8WWI1 1683 aa1.28□□□□□ -2.2
CHRNA4-220ENST00000637628 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.27□□□□□ -2.21
CHRNA4-220ENST00000637628 NFAT5O94916 1531 aa1.27□□□□□ -2.21
CHRNA4-220ENST00000637628 A0A0D9SG42 100 aa1.27□□□□□ -2.21
CHRNA4-220ENST00000637628 LYNX1G3V0Z9 82 aa1.27□□□□□ -2.21
CHRNA4-220ENST00000637628 SPRR1AP35321 89 aa1.27□□□□□ -2.21
CHRNA4-220ENST00000637628 KRTAP12-3P60328 96 aa1.27□□□□□ -2.21
CHRNA4-220ENST00000637628 PRB3Q04118 309 aaPredicted RBP1.27□□□□□ -2.21
CHRNA4-220ENST00000637628 DEFB105AQ8NG35 78 aa1.27□□□□□ -2.21
CHRNA4-220ENST00000637628 KIF21BO75037 1637 aa1.26□□□□□ -2.21
CHRNA4-220ENST00000637628 USF3Q68DE3 2245 aa1.26□□□□□ -2.21
CHRNA4-220ENST00000637628 H0YAA0 97 aa1.26□□□□□ -2.21
CHRNA4-220ENST00000637628 H1FX-AS1Q4G0G2 97 aa1.26□□□□□ -2.21
CHRNA4-220ENST00000637628 Q5VSD8 79 aa1.26□□□□□ -2.21
CHRNA4-220ENST00000637628 WFDC13Q8IUB5 93 aa1.26□□□□□ -2.21
CHRNA4-220ENST00000637628 JMJD1CQ15652 2540 aa1.26□□□□□ -2.21
CHRNA4-220ENST00000637628 PTPRQQ9UMZ3 2332 aa1.26□□□□□ -2.21
CHRNA4-220ENST00000637628 TFF3Q07654 80 aa1.25□□□□□ -2.21
CHRNA4-220ENST00000637628 KRTAP4-2Q9BYR5 136 aa1.25□□□□□ -2.21
CHRNA4-220ENST00000637628 C6orf48Q9UBA6 75 aa1.25□□□□□ -2.21
CHRNA4-220ENST00000637628 SAMD9LQ8IVG5 1584 aa1.25□□□□□ -2.21
CHRNA4-220ENST00000637628 ROS1P08922 2347 aa1.24□□□□□ -2.21
CHRNA4-220ENST00000637628 SPRR1BP22528 89 aa1.24□□□□□ -2.21
CHRNA4-220ENST00000637628 SNRPGP62308 76 aaKnown RBP1.23□□□□□ -2.21
CHRNA4-220ENST00000637628 PTPRZ1P23471 2315 aaPredicted RBP1.22□□□□□ -2.21
CHRNA4-220ENST00000637628 IAPPP10997 89 aa1.22□□□□□ -2.21
CHRNA4-220ENST00000637628 KRTAP21-3Q3LHN1 58 aa1.22□□□□□ -2.21
CHRNA4-220ENST00000637628 SMIM2Q9BVW6 85 aa1.22□□□□□ -2.21
CHRNA4-220ENST00000637628 KLK9Q2XQG4 91 aa1.21□□□□□ -2.22
CHRNA4-220ENST00000637628 DEFB130BP0DP73 79 aa1.2□□□□□ -2.22
CHRNA4-220ENST00000637628 DEFB130AP0DP74 79 aa1.2□□□□□ -2.22
CHRNA4-220ENST00000637628 TRIOBPQ9H2D6 2365 aa1.19□□□□□ -2.22
CHRNA4-220ENST00000637628 ASH1LQ9NR48 2969 aaKnown RBP1.17□□□□□ -2.22
CHRNA4-220ENST00000637628 KRTAP9-6A8MVA2 160 aa1.17□□□□□ -2.22
CHRNA4-220ENST00000637628 NDUFA1O15239 70 aa1.17□□□□□ -2.22
CHRNA4-220ENST00000637628 RPS27P42677 84 aaKnown RBP1.17□□□□□ -2.22
CHRNA4-220ENST00000637628 KRTAP10-4P60372 401 aaPredicted RBP1.17□□□□□ -2.22
CHRNA4-220ENST00000637628 RPS27LQ71UM5 84 aaKnown RBP1.17□□□□□ -2.22
CHRNA4-220ENST00000637628 USP24Q9UPU5 2620 aa1.16□□□□□ -2.22
CHRNA4-220ENST00000637628 MROH2BQ7Z745 1585 aa1.16□□□□□ -2.22
CHRNA4-220ENST00000637628 C2CD3Q4AC94 2353 aa1.15□□□□□ -2.22
CHRNA4-220ENST00000637628 DUOX1Q9NRD9 1551 aa1.14□□□□□ -2.23
CHRNA4-220ENST00000637628 WFDC10BQ8IUB3 73 aa1.14□□□□□ -2.23
CHRNA4-220ENST00000637628 GCC2Q8IWJ2 1684 aa1.13□□□□□ -2.23
CHRNA4-220ENST00000637628 PKDREJQ9NTG1 2253 aa1.13□□□□□ -2.23
CHRNA4-220ENST00000637628 WT1-ASQ06250 92 aa1.13□□□□□ -2.23
CHRNA4-220ENST00000637628 WNK2Q9Y3S1 2297 aa1.13□□□□□ -2.23
CHRNA4-220ENST00000637628 CLTCL1P53675 1640 aa1.12□□□□□ -2.23
CHRNA4-220ENST00000637628 PIEZO2Q9H5I5 2752 aa1.11□□□□□ -2.23
CHRNA4-220ENST00000637628 H3BUA1 57 aa1.11□□□□□ -2.23
CHRNA4-220ENST00000637628 KRTAP5-3Q6L8H2 238 aa1.11□□□□□ -2.23
CHRNA4-220ENST00000637628 KAAG1Q9UBP8 84 aa1.11□□□□□ -2.23
CHRNA4-220ENST00000637628 COL6A3P12111 3177 aa1.11□□□□□ -2.23
CHRNA4-220ENST00000637628 ALMS1Q8TCU4 4167 aa1.11□□□□□ -2.23
CHRNA4-220ENST00000637628 DEFB109BQ30KR1 87 aa1.1□□□□□ -2.23
CHRNA4-220ENST00000637628 HIVEP2P31629 2446 aa1.1□□□□□ -2.23
CHRNA4-220ENST00000637628 SPTBN2O15020 2390 aa1.1□□□□□ -2.23
CHRNA4-220ENST00000637628 PRLHP81277 87 aa1.09□□□□□ -2.23
CHRNA4-220ENST00000637628 TRANK1O15050 2925 aa1.09□□□□□ -2.24
CHRNA4-220ENST00000637628 CACNA1HO95180 2353 aa1.08□□□□□ -2.24
CHRNA4-220ENST00000637628 UBR4Q5T4S7 5183 aa1.07□□□□□ -2.24
CHRNA4-220ENST00000637628 SRCAPQ6ZRS2 3230 aa1.06□□□□□ -2.24
CHRNA4-220ENST00000637628 S4R3F8 94 aa1.06□□□□□ -2.24
CHRNA4-220ENST00000637628 KNL1Q8NG31 2342 aa1.06□□□□□ -2.24
CHRNA4-220ENST00000637628 ZNF462Q96JM2 2506 aa1.06□□□□□ -2.24
CHRNA4-220ENST00000637628 SPTBN1Q01082 2364 aaKnown RBP1.05□□□□□ -2.24
CHRNA4-220ENST00000637628 LCE3AQ5TA76 89 aa1.05□□□□□ -2.24
CHRNA4-220ENST00000637628 DEFB106AQ8N104 65 aa1.05□□□□□ -2.24
CHRNA4-220ENST00000637628 IGLV5-48A0A075B6I7 105 aa1.04□□□□□ -2.24
CHRNA4-220ENST00000637628 DEFB131AP59861 70 aa1.04□□□□□ -2.24
CHRNA4-220ENST00000637628 TTC28Q96AY4 2481 aa1.03□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms