RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 ANKRD11Q6UB99 2663 aaPredicted RBP6.41□□□□□ -1.38
CACNA1A-242ENST00000637485 CHD8Q9HCK8 2581 aa6.4□□□□□ -1.38
CACNA1A-242ENST00000637485 Q8NAQ8 132 aa6.39□□□□□ -1.39
CACNA1A-242ENST00000637485 DSCR10P59022 87 aa6.39□□□□□ -1.39
CACNA1A-242ENST00000637485 TYMSOSQ8TAI1 123 aa6.38□□□□□ -1.39
CACNA1A-242ENST00000637485 FAM229BQ4G0N7 80 aa6.38□□□□□ -1.39
CACNA1A-242ENST00000637485 CSAG1Q6PB30 78 aa6.38□□□□□ -1.39
CACNA1A-242ENST00000637485 CEP295Q9C0D2 2601 aa6.38□□□□□ -1.39
CACNA1A-242ENST00000637485 PRR26Q8N8Z3 221 aa6.38□□□□□ -1.39
CACNA1A-242ENST00000637485 A0A096LNT2 108 aa6.37□□□□□ -1.39
CACNA1A-242ENST00000637485 Q5VV11 94 aa6.37□□□□□ -1.39
CACNA1A-242ENST00000637485 C15orf56Q8N910 161 aa6.37□□□□□ -1.39
CACNA1A-242ENST00000637485 CHTF8P0CG12 524 aa6.37□□□□□ -1.39
CACNA1A-242ENST00000637485 A0A0D9SG42 100 aa6.36□□□□□ -1.39
CACNA1A-242ENST00000637485 CSNK1G2-AS1Q8NCQ2 148 aa6.36□□□□□ -1.39
CACNA1A-242ENST00000637485 KRTAP24-1Q3LI83 254 aa6.35□□□□□ -1.39
CACNA1A-242ENST00000637485 A0A1W2PNM2 257 aa6.35□□□□□ -1.39
CACNA1A-242ENST00000637485 ASB16-AS1Q495Z4 193 aa6.34□□□□□ -1.39
CACNA1A-242ENST00000637485 USP9XQ93008 2570 aaPredicted RBP6.34□□□□□ -1.39
CACNA1A-242ENST00000637485 LINC00483Q53H64 154 aa6.34□□□□□ -1.39
CACNA1A-242ENST00000637485 A0A1B0GU33 70 aa6.33□□□□□ -1.4
CACNA1A-242ENST00000637485 CENPFP49454 3210 aa6.33□□□□□ -1.4
CACNA1A-242ENST00000637485 ABCA12Q86UK0 2595 aa6.33□□□□□ -1.4
CACNA1A-242ENST00000637485 IGLV5-48A0A075B6I7 105 aa6.32□□□□□ -1.4
CACNA1A-242ENST00000637485 FAM168BA1KXE4 195 aa6.32□□□□□ -1.4
CACNA1A-242ENST00000637485 PLA2G2DQ9UNK4 145 aa6.32□□□□□ -1.4
CACNA1A-242ENST00000637485 PKD1L2Q7Z442 2459 aa6.31□□□□□ -1.4
CACNA1A-242ENST00000637485 KRTAP16-1A8MUX0 517 aa6.31□□□□□ -1.4
CACNA1A-242ENST00000637485 DNAH10OSP0CZ25 163 aa6.31□□□□□ -1.4
CACNA1A-242ENST00000637485 GOLGB1Q14789 3259 aaKnown RBP6.3□□□□□ -1.4
CACNA1A-242ENST00000637485 CYSTM1Q9H1C7 97 aa6.3□□□□□ -1.4
CACNA1A-242ENST00000637485 LRRK2Q5S007 2527 aa6.29□□□□□ -1.4
CACNA1A-242ENST00000637485 JMJD1CQ15652 2540 aa6.29□□□□□ -1.4
CACNA1A-242ENST00000637485 RTL8CO15255 209 aa6.28□□□□□ -1.4
CACNA1A-242ENST00000637485 LINC00612Q8N6U2 182 aa6.28□□□□□ -1.4
CACNA1A-242ENST00000637485 SETD2Q9BYW2 2564 aaPredicted RBP6.28□□□□□ -1.4
CACNA1A-242ENST00000637485 NBDYA0A0U1RRE5 68 aa6.28□□□□□ -1.4
CACNA1A-242ENST00000637485 USP9YO00507 2555 aaPredicted RBP6.28□□□□□ -1.4
CACNA1A-242ENST00000637485 C19orf73Q9NVV2 129 aa6.27□□□□□ -1.41
CACNA1A-242ENST00000637485 TLN2Q9Y4G6 2542 aa6.27□□□□□ -1.41
CACNA1A-242ENST00000637485 TLX1NBP0CAT3 122 aa6.26□□□□□ -1.41
CACNA1A-242ENST00000637485 OXTP01178 125 aa6.26□□□□□ -1.41
CACNA1A-242ENST00000637485 GIG44P09565 113 aaPredicted RBP6.26□□□□□ -1.41
CACNA1A-242ENST00000637485 Q8N1X5 172 aa6.26□□□□□ -1.41
CACNA1A-242ENST00000637485 PRR34Q9NV39 138 aa6.26□□□□□ -1.41
CACNA1A-242ENST00000637485 SPINK7P58062 85 aa6.25□□□□□ -1.41
CACNA1A-242ENST00000637485 FN1P02751 2386 aaKnown RBP6.25□□□□□ -1.41
CACNA1A-242ENST00000637485 A0A0G2JQZ4 141 aa6.25□□□□□ -1.41
CACNA1A-242ENST00000637485 A0A1W2PNN7 141 aa6.25□□□□□ -1.41
CACNA1A-242ENST00000637485 SPRR4Q96PI1 79 aa6.25□□□□□ -1.41
CACNA1A-242ENST00000637485 ANKRD17O75179 2603 aaKnown RBP6.24□□□□□ -1.41
CACNA1A-242ENST00000637485 SPTBN4Q9H254 2564 aa6.23□□□□□ -1.41
CACNA1A-242ENST00000637485 ZNF861PO60384 105 aa6.22□□□□□ -1.41
CACNA1A-242ENST00000637485 HRES1P13985 223 aa6.22□□□□□ -1.41
CACNA1A-242ENST00000637485 KRTAP10-3P60369 221 aa6.21□□□□□ -1.41
CACNA1A-242ENST00000637485 KRTAP1-3Q8IUG1 177 aa6.21□□□□□ -1.41
CACNA1A-242ENST00000637485 ZFYVE26Q68DK2 2539 aa6.21□□□□□ -1.42
CACNA1A-242ENST00000637485 IGLV5-37A0A075B6J1 123 aa6.21□□□□□ -1.42
CACNA1A-242ENST00000637485 KRTAP10-11P60412 298 aa6.21□□□□□ -1.42
CACNA1A-242ENST00000637485 LINC00304Q8N9R0 145 aa6.19□□□□□ -1.42
CACNA1A-242ENST00000637485 ZNF575Q86XF7 245 aa6.18□□□□□ -1.42
CACNA1A-242ENST00000637485 DNAH12Q6ZR08 3092 aa6.17□□□□□ -1.42
CACNA1A-242ENST00000637485 ROMO1P60602 79 aa6.17□□□□□ -1.42
CACNA1A-242ENST00000637485 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
CACNA1A-242ENST00000637485 K7EIL1 84 aa6.16□□□□□ -1.42
CACNA1A-242ENST00000637485 CNBPP62633 177 aaKnown RBP6.16□□□□□ -1.42
CACNA1A-242ENST00000637485 KRTAP1-1Q07627 177 aa6.16□□□□□ -1.42
CACNA1A-242ENST00000637485 C9orf92A6NGG3 77 aa6.15□□□□□ -1.43
CACNA1A-242ENST00000637485 WWC2-AS2Q96NR7 200 aa6.14□□□□□ -1.43
CACNA1A-242ENST00000637485 COX6B2Q6YFQ2 88 aa6.13□□□□□ -1.43
CACNA1A-242ENST00000637485 POLQO75417 2590 aa6.12□□□□□ -1.43
CACNA1A-242ENST00000637485 MMP24-AS1A0A0U1RRL7 71 aa6.12□□□□□ -1.43
CACNA1A-242ENST00000637485 MTORP42345 2549 aa6.12□□□□□ -1.43
CACNA1A-242ENST00000637485 F8P00451 2351 aa6.11□□□□□ -1.43
CACNA1A-242ENST00000637485 A6NN06 94 aa6.09□□□□□ -1.43
CACNA1A-242ENST00000637485 IGLV7-43P04211 117 aa6.09□□□□□ -1.44
CACNA1A-242ENST00000637485 RPL37P61927 97 aaKnown RBP6.09□□□□□ -1.44
CACNA1A-242ENST00000637485 TNP2Q05952 138 aa6.08□□□□□ -1.44
CACNA1A-242ENST00000637485 ACANP16112 2415 aa6.07□□□□□ -1.44
CACNA1A-242ENST00000637485 ANAPC11Q9NYG5 84 aa6.06□□□□□ -1.44
CACNA1A-242ENST00000637485 FASNP49327 2511 aaKnown RBP6.06□□□□□ -1.44
CACNA1A-242ENST00000637485 A0A087WTM6 91 aa6.05□□□□□ -1.44
CACNA1A-242ENST00000637485 PSORS1C2Q9UIG4 136 aa6.04□□□□□ -1.44
CACNA1A-242ENST00000637485 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
CACNA1A-242ENST00000637485 SPATA8Q6RVD6 105 aa6.02□□□□□ -1.45
CACNA1A-242ENST00000637485 CHD7Q9P2D1 2997 aa6.02□□□□□ -1.45
CACNA1A-242ENST00000637485 Q5W150 140 aa6.02□□□□□ -1.45
CACNA1A-242ENST00000637485 ZCCHC13Q8WW36 166 aaKnown RBP6□□□□□ -1.45
CACNA1A-242ENST00000637485 H1FX-AS1Q4G0G2 97 aa6□□□□□ -1.45
CACNA1A-242ENST00000637485 BPTFQ12830 3046 aa6□□□□□ -1.45
CACNA1A-242ENST00000637485 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6□□□□□ -1.45
CACNA1A-242ENST00000637485 CASC10Q5T4H9 136 aa5.99□□□□□ -1.45
CACNA1A-242ENST00000637485 LINC00472Q9H8W2 130 aa5.99□□□□□ -1.45
CACNA1A-242ENST00000637485 CEP350Q5VT06 3117 aa5.98□□□□□ -1.45
CACNA1A-242ENST00000637485 CHD9Q3L8U1 2897 aa5.98□□□□□ -1.45
CACNA1A-242ENST00000637485 PRRC2CQ9Y520 2896 aaKnown RBP5.97□□□□□ -1.45
CACNA1A-242ENST00000637485 EPG5Q9HCE0 2579 aa5.96□□□□□ -1.45
CACNA1A-242ENST00000637485 UTRNP46939 3433 aa5.96□□□□□ -1.45
CACNA1A-242ENST00000637485 A0A087X002 238 aa5.96□□□□□ -1.46
CACNA1A-242ENST00000637485 SEC61BP60468 96 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms