RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 ZNF73O43830 326 aaPredicted RBP8.35□□□□□ -1.07
LINC00643-207ENST00000637212 VAMP3Q15836 100 aa8.35□□□□□ -1.07
LINC00643-207ENST00000637212 DYNC1H1Q14204 4646 aaKnown RBP8.34□□□□□ -1.07
LINC00643-207ENST00000637212 COX6CP09669 75 aa8.34□□□□□ -1.07
LINC00643-207ENST00000637212 SPRR1AP35321 89 aa8.34□□□□□ -1.07
LINC00643-207ENST00000637212 PSMB2P49721 201 aa8.34□□□□□ -1.07
LINC00643-207ENST00000637212 XGP55808 180 aa8.34□□□□□ -1.07
LINC00643-207ENST00000637212 REG3GQ6UW15 175 aa8.34□□□□□ -1.07
LINC00643-207ENST00000637212 H0YGX0 51 aa8.33□□□□□ -1.08
LINC00643-207ENST00000637212 C6orf99Q4VX62 202 aa8.33□□□□□ -1.08
LINC00643-207ENST00000637212 DIRC1Q969H9 104 aa8.33□□□□□ -1.08
LINC00643-207ENST00000637212 KRTAP11-1Q8IUC1 163 aa8.32□□□□□ -1.08
LINC00643-207ENST00000637212 LRP1BQ9NZR2 4599 aa8.31□□□□□ -1.08
LINC00643-207ENST00000637212 KRTAP4-16G5E9R7 235 aaPredicted RBP8.31□□□□□ -1.08
LINC00643-207ENST00000637212 H3BUT2 72 aa8.31□□□□□ -1.08
LINC00643-207ENST00000637212 TRIAP1O43715 76 aa8.31□□□□□ -1.08
LINC00643-207ENST00000637212 SCGB1C2P0DMR2 95 aa8.31□□□□□ -1.08
LINC00643-207ENST00000637212 SMCPP49901 116 aaPredicted RBP8.31□□□□□ -1.08
LINC00643-207ENST00000637212 KIAA1109Q2LD37 5005 aa8.3□□□□□ -1.08
LINC00643-207ENST00000637212 CDK2AP2O75956 126 aa8.3□□□□□ -1.08
LINC00643-207ENST00000637212 LYRM7Q5U5X0 104 aa8.3□□□□□ -1.08
LINC00643-207ENST00000637212 ETDCA0A1B0GVM5 59 aa8.29□□□□□ -1.08
LINC00643-207ENST00000637212 A0A1W2PPM0 123 aa8.29□□□□□ -1.08
LINC00643-207ENST00000637212 H0Y9J4 135 aa8.29□□□□□ -1.08
LINC00643-207ENST00000637212 BCE1O60756 84 aa8.29□□□□□ -1.08
LINC00643-207ENST00000637212 INAFM2P0DMQ5 153 aa8.29□□□□□ -1.08
LINC00643-207ENST00000637212 COX7BP24311 80 aa8.29□□□□□ -1.08
LINC00643-207ENST00000637212 PKHD1P08F94 4074 aa8.28□□□□□ -1.08
LINC00643-207ENST00000637212 B5MCH6 92 aa8.28□□□□□ -1.08
LINC00643-207ENST00000637212 FABP2P12104 132 aa8.28□□□□□ -1.08
LINC00643-207ENST00000637212 ELOF1P60002 83 aaKnown RBP8.28□□□□□ -1.08
LINC00643-207ENST00000637212 PSORS1C2Q9UIG4 136 aa8.28□□□□□ -1.08
LINC00643-207ENST00000637212 PCLOQ9Y6V0 5065 aa8.27□□□□□ -1.09
LINC00643-207ENST00000637212 SNCGO76070 127 aa8.27□□□□□ -1.09
LINC00643-207ENST00000637212 HAMPP81172 84 aa8.27□□□□□ -1.09
LINC00643-207ENST00000637212 NAA38Q9BRA0 125 aaKnown RBP8.27□□□□□ -1.09
LINC00643-207ENST00000637212 TRBV20-1A0A075B6N2 111 aa8.26□□□□□ -1.09
LINC00643-207ENST00000637212 A0A1B0GX51 115 aa8.26□□□□□ -1.09
LINC00643-207ENST00000637212 Q6ZRX8 168 aa8.26□□□□□ -1.09
LINC00643-207ENST00000637212 LINC00528Q8N1L1 170 aa8.26□□□□□ -1.09
LINC00643-207ENST00000637212 LINC00575Q6W349 94 aa8.25□□□□□ -1.09
LINC00643-207ENST00000637212 FAM19A1Q7Z5A9 133 aa8.25□□□□□ -1.09
LINC00643-207ENST00000637212 DHRS4-AS1Q9P1J3 65 aa8.25□□□□□ -1.09
LINC00643-207ENST00000637212 J3QL48 77 aa8.24□□□□□ -1.09
LINC00643-207ENST00000637212 SLC25A20O43772 301 aa8.24□□□□□ -1.09
LINC00643-207ENST00000637212 C1orf137Q5JT78 98 aa8.24□□□□□ -1.09
LINC00643-207ENST00000637212 UBE2AP49459 152 aa8.23□□□□□ -1.09
LINC00643-207ENST00000637212 KRTAP13-1Q8IUC0 172 aa8.23□□□□□ -1.09
LINC00643-207ENST00000637212 hADV29S1A0JD25 119 aa8.22□□□□□ -1.09
LINC00643-207ENST00000637212 IGLV7-43P04211 117 aa8.22□□□□□ -1.09
LINC00643-207ENST00000637212 ATXN8Q156A1 80 aa8.22□□□□□ -1.09
LINC00643-207ENST00000637212 LST1O00453 97 aa8.21□□□□□ -1.1
LINC00643-207ENST00000637212 ZNF861PO60384 105 aa8.21□□□□□ -1.1
LINC00643-207ENST00000637212 TRACP01848 142 aa8.21□□□□□ -1.1
LINC00643-207ENST00000637212 CLEC2BQ92478 149 aa8.21□□□□□ -1.1
LINC00643-207ENST00000637212 TCL1BO95988 128 aa8.2□□□□□ -1.1
LINC00643-207ENST00000637212 SMR3BP02814 79 aaPredicted RBP8.2□□□□□ -1.1
LINC00643-207ENST00000637212 RPL37AP61513 92 aaKnown RBP8.2□□□□□ -1.1
LINC00643-207ENST00000637212 FAM218AQ96MZ4 157 aa8.2□□□□□ -1.1
LINC00643-207ENST00000637212 Q9BRP9 147 aa8.2□□□□□ -1.1
LINC00643-207ENST00000637212 SPCS1Q9Y6A9 102 aa8.2□□□□□ -1.1
LINC00643-207ENST00000637212 APOBP04114 4563 aaKnown RBP8.19□□□□□ -1.1
LINC00643-207ENST00000637212 RYR1P21817 5038 aa8.19□□□□□ -1.1
LINC00643-207ENST00000637212 PRLHP81277 87 aa8.19□□□□□ -1.1
LINC00643-207ENST00000637212 GTF2H5Q6ZYL4 71 aa8.19□□□□□ -1.1
LINC00643-207ENST00000637212 SMCR5Q8TEV8 140 aa8.19□□□□□ -1.1
LINC00643-207ENST00000637212 FAM229AH3BQW9 127 aa8.18□□□□□ -1.1
LINC00643-207ENST00000637212 K7EP34 96 aa8.18□□□□□ -1.1
LINC00643-207ENST00000637212 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.18□□□□□ -1.1
LINC00643-207ENST00000637212 H3BQ85 93 aa8.17□□□□□ -1.1
LINC00643-207ENST00000637212 GHRHP01286 108 aa8.17□□□□□ -1.1
LINC00643-207ENST00000637212 DNAL4O96015 105 aa8.16□□□□□ -1.1
LINC00643-207ENST00000637212 PLA2G1BP04054 148 aaKnown RBP8.16□□□□□ -1.1
LINC00643-207ENST00000637212 OCIAD2Q56VL3 154 aa8.16□□□□□ -1.1
LINC00643-207ENST00000637212 HIGD2AQ9BW72 106 aa8.16□□□□□ -1.1
LINC00643-207ENST00000637212 A0A1B0GV90 55 aa8.15□□□□□ -1.1
LINC00643-207ENST00000637212 ERC2-IT1O76042 136 aa8.15□□□□□ -1.1
LINC00643-207ENST00000637212 LCE2AQ5TA79 106 aaPredicted RBP8.15□□□□□ -1.1
LINC00643-207ENST00000637212 H3BMG7 143 aa8.14□□□□□ -1.11
LINC00643-207ENST00000637212 KRTAP10-4P60372 401 aaPredicted RBP8.13□□□□□ -1.11
LINC00643-207ENST00000637212 SPINK6Q6UWN8 80 aa8.13□□□□□ -1.11
LINC00643-207ENST00000637212 Q6ZQY7 126 aa8.13□□□□□ -1.11
LINC00643-207ENST00000637212 PPDPFLQ8WWR9 84 aa8.13□□□□□ -1.11
LINC00643-207ENST00000637212 ABCA13Q86UQ4 5058 aa8.12□□□□□ -1.11
LINC00643-207ENST00000637212 ORMDL1Q9P0S3 153 aa8.12□□□□□ -1.11
LINC00643-207ENST00000637212 ZNF706Q9Y5V0 76 aaPredicted RBP8.12□□□□□ -1.11
LINC00643-207ENST00000637212 IGLV5-48A0A075B6I7 105 aa8.11□□□□□ -1.11
LINC00643-207ENST00000637212 TMEM256-PLSCR3K7ERE1 68 aa8.11□□□□□ -1.11
LINC00643-207ENST00000637212 BAALC-AS2P0C853 105 aa8.11□□□□□ -1.11
LINC00643-207ENST00000637212 UBE2V1Q13404 147 aa8.11□□□□□ -1.11
LINC00643-207ENST00000637212 TEX49A0A1B0GTD5 131 aa8.1□□□□□ -1.11
LINC00643-207ENST00000637212 C9JAW5 83 aa8.1□□□□□ -1.11
LINC00643-207ENST00000637212 Q8N1X5 172 aa8.1□□□□□ -1.11
LINC00643-207ENST00000637212 ST20-AS1Q8NBB2 130 aa8.1□□□□□ -1.11
LINC00643-207ENST00000637212 HSPG2P98160 4391 aa8.09□□□□□ -1.11
LINC00643-207ENST00000637212 SPRR1BP22528 89 aa8.09□□□□□ -1.11
LINC00643-207ENST00000637212 LINC01547P58512 204 aaPredicted RBP8.09□□□□□ -1.11
LINC00643-207ENST00000637212 LINC01600Q96MT4 127 aa8.09□□□□□ -1.11
LINC00643-207ENST00000637212 F8W1H4 67 aa8.08□□□□□ -1.12
LINC00643-207ENST00000637212 Q8N377 158 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms