RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 C8orf17Q9NRJ1 99 aa10.75□□□□□ -0.69
CACNA1A-221ENST00000636012 CDC42SE1Q9NRR8 79 aa10.75□□□□□ -0.69
CACNA1A-221ENST00000636012 CHD8Q9HCK8 2581 aa10.73□□□□□ -0.69
CACNA1A-221ENST00000636012 FASNP49327 2511 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-221ENST00000636012 DNAH10OSP0CZ25 163 aa10.73□□□□□ -0.69
CACNA1A-221ENST00000636012 TRBV7-4A0A0J9YYF1 115 aa10.73□□□□□ -0.69
CACNA1A-221ENST00000636012 CAMK2N1Q7Z7J9 78 aa10.73□□□□□ -0.69
CACNA1A-221ENST00000636012 ERC2-IT1O76042 136 aa10.72□□□□□ -0.69
CACNA1A-221ENST00000636012 C10orf142B7Z368 130 aa10.72□□□□□ -0.69
CACNA1A-221ENST00000636012 CEP350Q5VT06 3117 aa10.71□□□□□ -0.69
CACNA1A-221ENST00000636012 Q8N1X5 172 aa10.71□□□□□ -0.7
CACNA1A-221ENST00000636012 LINC00304Q8N9R0 145 aa10.71□□□□□ -0.7
CACNA1A-221ENST00000636012 A8MWP4 228 aa10.7□□□□□ -0.7
CACNA1A-221ENST00000636012 LINC00483Q53H64 154 aa10.7□□□□□ -0.7
CACNA1A-221ENST00000636012 LOC110117498A0A087WWA1 95 aa10.7□□□□□ -0.7
CACNA1A-221ENST00000636012 A0A1B0GW54 56 aa10.7□□□□□ -0.7
CACNA1A-221ENST00000636012 H3BPC8 53 aa10.7□□□□□ -0.7
CACNA1A-221ENST00000636012 MRPL34Q9BQ48 92 aaKnown RBP10.69□□□□□ -0.7
CACNA1A-221ENST00000636012 PCNTO95613 3336 aa10.68□□□□□ -0.7
CACNA1A-221ENST00000636012 ANAPC11Q9NYG5 84 aa10.67□□□□□ -0.7
CACNA1A-221ENST00000636012 KRTAP10-11P60412 298 aa10.66□□□□□ -0.7
CACNA1A-221ENST00000636012 LOC101927531A0A1B0GV80 90 aa10.65□□□□□ -0.7
CACNA1A-221ENST00000636012 TLX1NBP0CAT3 122 aa10.65□□□□□ -0.7
CACNA1A-221ENST00000636012 SMCPP49901 116 aaPredicted RBP10.64□□□□□ -0.71
CACNA1A-221ENST00000636012 A0A0G2JQZ4 141 aa10.63□□□□□ -0.71
CACNA1A-221ENST00000636012 A0A1W2PNN7 141 aa10.63□□□□□ -0.71
CACNA1A-221ENST00000636012 K7EIL1 84 aa10.62□□□□□ -0.71
CACNA1A-221ENST00000636012 IGLV1-50A0A075B6I6 118 aa10.62□□□□□ -0.71
CACNA1A-221ENST00000636012 LINC00336Q6ZUF6 198 aa10.62□□□□□ -0.71
CACNA1A-221ENST00000636012 KTN1-AS1Q86SY8 53 aa10.58□□□□□ -0.72
CACNA1A-221ENST00000636012 ZNF861PO60384 105 aa10.58□□□□□ -0.72
CACNA1A-221ENST00000636012 IGFL1Q6UW32 110 aa10.56□□□□□ -0.72
CACNA1A-221ENST00000636012 C15orf56Q8N910 161 aa10.55□□□□□ -0.72
CACNA1A-221ENST00000636012 PSORS1C2Q9UIG4 136 aa10.55□□□□□ -0.72
CACNA1A-221ENST00000636012 CEP295Q9C0D2 2601 aa10.53□□□□□ -0.72
CACNA1A-221ENST00000636012 A0A087WTM6 91 aa10.52□□□□□ -0.73
CACNA1A-221ENST00000636012 RPS28P62857 69 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-221ENST00000636012 KCNQ1DNQ9H478 68 aa10.5□□□□□ -0.73
CACNA1A-221ENST00000636012 A0A1B0GVX0 72 aa10.5□□□□□ -0.73
CACNA1A-221ENST00000636012 CD164Q04900 197 aa10.48□□□□□ -0.73
CACNA1A-221ENST00000636012 PRR15Q8IV56 129 aa10.48□□□□□ -0.73
CACNA1A-221ENST00000636012 PRO0461Q9UI25 63 aa10.47□□□□□ -0.73
CACNA1A-221ENST00000636012 LCA10Q71F78 164 aa10.47□□□□□ -0.73
CACNA1A-221ENST00000636012 CYP4F30PQ9H0H9 118 aa10.46□□□□□ -0.73
CACNA1A-221ENST00000636012 Q8N377 158 aa10.45□□□□□ -0.74
CACNA1A-221ENST00000636012 Q6ZSA8 131 aa10.45□□□□□ -0.74
CACNA1A-221ENST00000636012 IGLV7-43P04211 117 aa10.44□□□□□ -0.74
CACNA1A-221ENST00000636012 KRTAP10-3P60369 221 aa10.43□□□□□ -0.74
CACNA1A-221ENST00000636012 FAM104AQ969W3 186 aa10.43□□□□□ -0.74
CACNA1A-221ENST00000636012 PLAC4Q8WY50 150 aa10.42□□□□□ -0.74
CACNA1A-221ENST00000636012 LITAFQ99732 161 aa10.41□□□□□ -0.74
CACNA1A-221ENST00000636012 LINC00528Q8N1L1 170 aa10.41□□□□□ -0.74
CACNA1A-221ENST00000636012 C19orf73Q9NVV2 129 aa10.41□□□□□ -0.74
CACNA1A-221ENST00000636012 Q1T7F1 81 aa10.39□□□□□ -0.75
CACNA1A-221ENST00000636012 H3BS24 57 aa10.38□□□□□ -0.75
CACNA1A-221ENST00000636012 XIRP2A4UGR9 3374 aa10.38□□□□□ -0.75
CACNA1A-221ENST00000636012 A0A0A0MQY5 61 aa10.37□□□□□ -0.75
CACNA1A-221ENST00000636012 CFAP54Q96N23 3096 aa10.36□□□□□ -0.75
CACNA1A-221ENST00000636012 C9orf163Q8N9P6 203 aa10.35□□□□□ -0.75
CACNA1A-221ENST00000636012 PRR34Q9NV39 138 aa10.34□□□□□ -0.75
CACNA1A-221ENST00000636012 PRR26Q8N8Z3 221 aa10.33□□□□□ -0.76
CACNA1A-221ENST00000636012 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
CACNA1A-221ENST00000636012 CASC10Q5T4H9 136 aa10.32□□□□□ -0.76
CACNA1A-221ENST00000636012 SPINK7P58062 85 aa10.32□□□□□ -0.76
CACNA1A-221ENST00000636012 EIF4EBP3O60516 100 aaPredicted RBP10.31□□□□□ -0.76
CACNA1A-221ENST00000636012 EPG5Q9HCE0 2579 aa10.3□□□□□ -0.76
CACNA1A-221ENST00000636012 SPRR4Q96PI1 79 aa10.29□□□□□ -0.76
CACNA1A-221ENST00000636012 GIG44P09565 113 aaPredicted RBP10.27□□□□□ -0.76
CACNA1A-221ENST00000636012 MKI67P46013 3256 aaKnown RBP10.26□□□□□ -0.77
CACNA1A-221ENST00000636012 LAMA2P24043 3122 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-221ENST00000636012 MGAM2Q2M2H8 2515 aa10.24□□□□□ -0.77
CACNA1A-221ENST00000636012 LINC00612Q8N6U2 182 aa10.21□□□□□ -0.77
CACNA1A-221ENST00000636012 IGLV7-46A0A075B6I9 117 aa10.21□□□□□ -0.77
CACNA1A-221ENST00000636012 A0A1B0GU33 70 aa10.21□□□□□ -0.77
CACNA1A-221ENST00000636012 TNP2Q05952 138 aa10.21□□□□□ -0.78
CACNA1A-221ENST00000636012 AKAP13Q12802 2813 aa10.21□□□□□ -0.78
CACNA1A-221ENST00000636012 Q5VSD8 79 aa10.19□□□□□ -0.78
CACNA1A-221ENST00000636012 S4R3F8 94 aa10.19□□□□□ -0.78
CACNA1A-221ENST00000636012 CNBPP62633 177 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-221ENST00000636012 HRES1P13985 223 aa10.17□□□□□ -0.78
CACNA1A-221ENST00000636012 KLK9Q2XQG4 91 aa10.17□□□□□ -0.78
CACNA1A-221ENST00000636012 REV3LO60673 3130 aa10.15□□□□□ -0.78
CACNA1A-221ENST00000636012 PRAC1Q96KF2 57 aa10.15□□□□□ -0.78
CACNA1A-221ENST00000636012 A0A096LNT2 108 aa10.14□□□□□ -0.79
CACNA1A-221ENST00000636012 KLKP1Q107X0 134 aa10.14□□□□□ -0.79
CACNA1A-221ENST00000636012 CSAG1Q6PB30 78 aa10.13□□□□□ -0.79
CACNA1A-221ENST00000636012 CELSR3Q9NYQ7 3312 aa10.13□□□□□ -0.79
CACNA1A-221ENST00000636012 R4GN34 69 aa10.12□□□□□ -0.79
CACNA1A-221ENST00000636012 CFAP46Q8IYW2 2715 aa10.12□□□□□ -0.79
CACNA1A-221ENST00000636012 ITPR3Q14573 2671 aa10.11□□□□□ -0.79
CACNA1A-221ENST00000636012 HECTD1Q9ULT8 2610 aa10.11□□□□□ -0.79
CACNA1A-221ENST00000636012 H7BZZ5 65 aa10.1□□□□□ -0.79
CACNA1A-221ENST00000636012 A0A1W2PNM2 257 aa10.1□□□□□ -0.79
CACNA1A-221ENST00000636012 FLNAP21333 2647 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-221ENST00000636012 FLNBO75369 2602 aaKnown RBP10.05□□□□□ -0.8
CACNA1A-221ENST00000636012 SPANXA2-OT1Q8N9U9 137 aa10.05□□□□□ -0.8
CACNA1A-221ENST00000636012 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.05□□□□□ -0.8
CACNA1A-221ENST00000636012 A0A0C4DFX4 3053 aa10.05□□□□□ -0.8
CACNA1A-221ENST00000636012 KRTAP1-3Q8IUG1 177 aa10.05□□□□□ -0.8
CACNA1A-221ENST00000636012 ATRQ13535 2644 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms