RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 ZNF861PO60384 105 aa7.79□□□□□ -1.16
SHPRH-211ENST00000629427 COA5Q86WW8 74 aa7.78□□□□□ -1.16
SHPRH-211ENST00000629427 PRO0461Q9UI25 63 aa7.78□□□□□ -1.16
SHPRH-211ENST00000629427 IGFL1Q6UW32 110 aa7.77□□□□□ -1.17
SHPRH-211ENST00000629427 KCNQ1DNQ9H478 68 aa7.77□□□□□ -1.17
SHPRH-211ENST00000629427 A0A087WTM6 91 aa7.76□□□□□ -1.17
SHPRH-211ENST00000629427 C15orf56Q8N910 161 aa7.75□□□□□ -1.17
SHPRH-211ENST00000629427 ANAPC11Q9NYG5 84 aa7.75□□□□□ -1.17
SHPRH-211ENST00000629427 IGLV5-37A0A075B6J1 123 aa7.74□□□□□ -1.17
SHPRH-211ENST00000629427 RBM12B-AS1Q9P1G2 102 aa7.74□□□□□ -1.17
SHPRH-211ENST00000629427 CRIPTQ9P021 101 aa7.74□□□□□ -1.17
SHPRH-211ENST00000629427 C8orf17Q9NRJ1 99 aa7.74□□□□□ -1.17
SHPRH-211ENST00000629427 UQCR11O14957 56 aa7.73□□□□□ -1.17
SHPRH-211ENST00000629427 LITAFQ99732 161 aa7.73□□□□□ -1.17
SHPRH-211ENST00000629427 RPS28P62857 69 aaKnown RBP7.73□□□□□ -1.17
SHPRH-211ENST00000629427 C19orf73Q9NVV2 129 aa7.73□□□□□ -1.17
SHPRH-211ENST00000629427 CEP350Q5VT06 3117 aa7.73□□□□□ -1.17
SHPRH-211ENST00000629427 A0A1B0GVX0 72 aa7.72□□□□□ -1.17
SHPRH-211ENST00000629427 C9orf129Q5T035 196 aaKnown RBP7.72□□□□□ -1.17
SHPRH-211ENST00000629427 KRTAP10-3P60369 221 aa7.71□□□□□ -1.17
SHPRH-211ENST00000629427 A0A0G2JQZ4 141 aa7.71□□□□□ -1.17
SHPRH-211ENST00000629427 A0A1W2PNN7 141 aa7.71□□□□□ -1.17
SHPRH-211ENST00000629427 PRR15Q8IV56 129 aa7.71□□□□□ -1.17
SHPRH-211ENST00000629427 LINC01554Q52M75 96 aa7.71□□□□□ -1.18
SHPRH-211ENST00000629427 LINC00528Q8N1L1 170 aa7.71□□□□□ -1.18
SHPRH-211ENST00000629427 Q8N377 158 aa7.71□□□□□ -1.18
SHPRH-211ENST00000629427 PRR34Q9NV39 138 aa7.69□□□□□ -1.18
SHPRH-211ENST00000629427 IGLV7-43P04211 117 aa7.68□□□□□ -1.18
SHPRH-211ENST00000629427 MIR22HGQ0VDD5 57 aa7.68□□□□□ -1.18
SHPRH-211ENST00000629427 A8MUN3 132 aa7.68□□□□□ -1.18
SHPRH-211ENST00000629427 LINC00336Q6ZUF6 198 aa7.67□□□□□ -1.18
SHPRH-211ENST00000629427 PSORS1C2Q9UIG4 136 aa7.67□□□□□ -1.18
SHPRH-211ENST00000629427 C9orf163Q8N9P6 203 aa7.66□□□□□ -1.18
SHPRH-211ENST00000629427 KLK9Q2XQG4 91 aa7.66□□□□□ -1.18
SHPRH-211ENST00000629427 ERC2-IT1O76042 136 aa7.66□□□□□ -1.18
SHPRH-211ENST00000629427 PCNTO95613 3336 aa7.65□□□□□ -1.18
SHPRH-211ENST00000629427 CYP4F30PQ9H0H9 118 aa7.64□□□□□ -1.19
SHPRH-211ENST00000629427 A0A0D9SG42 100 aa7.64□□□□□ -1.19
SHPRH-211ENST00000629427 PLA2G2DQ9UNK4 145 aa7.64□□□□□ -1.19
SHPRH-211ENST00000629427 TLX1NBP0CAT3 122 aa7.63□□□□□ -1.19
SHPRH-211ENST00000629427 GIG44P09565 113 aaPredicted RBP7.63□□□□□ -1.19
SHPRH-211ENST00000629427 EIF4EBP3O60516 100 aaPredicted RBP7.62□□□□□ -1.19
SHPRH-211ENST00000629427 CASC10Q5T4H9 136 aa7.6□□□□□ -1.19
SHPRH-211ENST00000629427 Q8N1X5 172 aa7.6□□□□□ -1.19
SHPRH-211ENST00000629427 SPRR4Q96PI1 79 aa7.59□□□□□ -1.19
SHPRH-211ENST00000629427 A0A096LNT2 108 aa7.59□□□□□ -1.19
SHPRH-211ENST00000629427 ZNF575Q86XF7 245 aa7.59□□□□□ -1.2
SHPRH-211ENST00000629427 IGLV5-48A0A075B6I7 105 aa7.57□□□□□ -1.2
SHPRH-211ENST00000629427 FLG2Q5D862 2391 aaPredicted RBP7.57□□□□□ -1.2
SHPRH-211ENST00000629427 CNBPP62633 177 aaKnown RBP7.55□□□□□ -1.2
SHPRH-211ENST00000629427 LINC00612Q8N6U2 182 aa7.55□□□□□ -1.2
SHPRH-211ENST00000629427 Q6ZSA8 131 aa7.54□□□□□ -1.2
SHPRH-211ENST00000629427 M0R2T5 61 aa7.54□□□□□ -1.2
SHPRH-211ENST00000629427 FAM104AQ969W3 186 aa7.54□□□□□ -1.2
SHPRH-211ENST00000629427 CDC42SE1Q9NRR8 79 aa7.53□□□□□ -1.2
SHPRH-211ENST00000629427 MGAM2Q2M2H8 2515 aa7.52□□□□□ -1.21
SHPRH-211ENST00000629427 TNP2Q05952 138 aa7.51□□□□□ -1.21
SHPRH-211ENST00000629427 KLKP1Q107X0 134 aa7.51□□□□□ -1.21
SHPRH-211ENST00000629427 EPG5Q9HCE0 2579 aa7.5□□□□□ -1.21
SHPRH-211ENST00000629427 KRTAP1-3Q8IUG1 177 aa7.49□□□□□ -1.21
SHPRH-211ENST00000629427 IGLV7-46A0A075B6I9 117 aa7.48□□□□□ -1.21
SHPRH-211ENST00000629427 A0A1W2PNM2 257 aa7.47□□□□□ -1.21
SHPRH-211ENST00000629427 CFAP54Q96N23 3096 aa7.47□□□□□ -1.21
SHPRH-211ENST00000629427 H7BZZ5 65 aa7.46□□□□□ -1.22
SHPRH-211ENST00000629427 PRR26Q8N8Z3 221 aa7.44□□□□□ -1.22
SHPRH-211ENST00000629427 LUZP6Q538Z0 58 aa7.44□□□□□ -1.22
SHPRH-211ENST00000629427 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
SHPRH-211ENST00000629427 ITPR3Q14573 2671 aa7.43□□□□□ -1.22
SHPRH-211ENST00000629427 SPANXA2-OT1Q8N9U9 137 aa7.43□□□□□ -1.22
SHPRH-211ENST00000629427 FLNAP21333 2647 aaKnown RBP7.42□□□□□ -1.22
SHPRH-211ENST00000629427 KRTAP1-1Q07627 177 aa7.42□□□□□ -1.22
SHPRH-211ENST00000629427 FLNBO75369 2602 aaKnown RBP7.41□□□□□ -1.22
SHPRH-211ENST00000629427 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.22
SHPRH-211ENST00000629427 HECTD1Q9ULT8 2610 aa7.4□□□□□ -1.22
SHPRH-211ENST00000629427 AKAP13Q12802 2813 aa7.4□□□□□ -1.22
SHPRH-211ENST00000629427 MKI67P46013 3256 aaKnown RBP7.4□□□□□ -1.23
SHPRH-211ENST00000629427 CD164Q04900 197 aa7.39□□□□□ -1.23
SHPRH-211ENST00000629427 KTN1-AS1Q86SY8 53 aa7.39□□□□□ -1.23
SHPRH-211ENST00000629427 CFAP46Q8IYW2 2715 aa7.38□□□□□ -1.23
SHPRH-211ENST00000629427 LAMA2P24043 3122 aaKnown RBP7.37□□□□□ -1.23
SHPRH-211ENST00000629427 XIRP2A4UGR9 3374 aa7.35□□□□□ -1.23
SHPRH-211ENST00000629427 LCA10Q71F78 164 aa7.35□□□□□ -1.23
SHPRH-211ENST00000629427 LINC00483Q53H64 154 aa7.35□□□□□ -1.23
SHPRH-211ENST00000629427 MAST4O15021 2626 aa7.33□□□□□ -1.24
SHPRH-211ENST00000629427 A0A1B0GU33 70 aa7.33□□□□□ -1.24
SHPRH-211ENST00000629427 HELZ2Q9BYK8 2649 aaKnown RBP7.32□□□□□ -1.24
SHPRH-211ENST00000629427 S4R3F8 94 aa7.32□□□□□ -1.24
SHPRH-211ENST00000629427 ATRQ13535 2644 aa7.32□□□□□ -1.24
SHPRH-211ENST00000629427 Q1T7F1 81 aa7.31□□□□□ -1.24
SHPRH-211ENST00000629427 HRES1P13985 223 aa7.3□□□□□ -1.24
SHPRH-211ENST00000629427 FAM229BQ4G0N7 80 aa7.3□□□□□ -1.24
SHPRH-211ENST00000629427 OCR1Q9BZK8 76 aa7.29□□□□□ -1.24
SHPRH-211ENST00000629427 CHD7Q9P2D1 2997 aa7.28□□□□□ -1.24
SHPRH-211ENST00000629427 CSAG1Q6PB30 78 aa7.27□□□□□ -1.25
SHPRH-211ENST00000629427 ZCCHC13Q8WW36 166 aaKnown RBP7.26□□□□□ -1.25
SHPRH-211ENST00000629427 A0A0C4DFX4 3053 aa7.26□□□□□ -1.25
SHPRH-211ENST00000629427 PLAC8Q9NZF1 115 aa7.25□□□□□ -1.25
SHPRH-211ENST00000629427 CELSR3Q9NYQ7 3312 aa7.23□□□□□ -1.25
SHPRH-211ENST00000629427 CHD6Q8TD26 2715 aa7.23□□□□□ -1.25
SHPRH-211ENST00000629427 TEX15Q9BXT5 2789 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms