RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 TENM1Q9UKZ4 2725 aa4.74□□□□□ -1.65
NEDD9-216ENST00000620854 B9D2Q9BPU9 175 aa4.74□□□□□ -1.65
NEDD9-216ENST00000620854 LINC01547P58512 204 aaPredicted RBP4.74□□□□□ -1.65
NEDD9-216ENST00000620854 Q6ZTC4 211 aa4.74□□□□□ -1.65
NEDD9-216ENST00000620854 TRAV7A0A075B6U4 112 aa4.74□□□□□ -1.65
NEDD9-216ENST00000620854 DEFB116Q30KQ4 102 aa4.74□□□□□ -1.65
NEDD9-216ENST00000620854 TRRAPQ9Y4A5 3859 aa4.74□□□□□ -1.65
NEDD9-216ENST00000620854 Q5XG85 94 aa4.73□□□□□ -1.65
NEDD9-216ENST00000620854 LINC00575Q6W349 94 aa4.73□□□□□ -1.65
NEDD9-216ENST00000620854 Q6ZVQ6 151 aa4.73□□□□□ -1.65
NEDD9-216ENST00000620854 CSNK1G2-AS1Q8NCQ2 148 aa4.73□□□□□ -1.65
NEDD9-216ENST00000620854 KIAA0087Q14695 138 aa4.72□□□□□ -1.65
NEDD9-216ENST00000620854 C1orf137Q5JT78 98 aa4.72□□□□□ -1.65
NEDD9-216ENST00000620854 NDUFC1O43677 76 aa4.72□□□□□ -1.65
NEDD9-216ENST00000620854 EGFEM1PQ0D2K5 195 aa4.72□□□□□ -1.65
NEDD9-216ENST00000620854 Q6ZQT0 140 aa4.72□□□□□ -1.65
NEDD9-216ENST00000620854 TM2D3Q9BRN9 247 aa4.72□□□□□ -1.65
NEDD9-216ENST00000620854 C19orf73Q9NVV2 129 aa4.72□□□□□ -1.65
NEDD9-216ENST00000620854 NOTCH1P46531 2555 aa4.71□□□□□ -1.66
NEDD9-216ENST00000620854 SMIM26A0A096LP01 95 aa4.71□□□□□ -1.66
NEDD9-216ENST00000620854 H7BZZ5 65 aa4.71□□□□□ -1.66
NEDD9-216ENST00000620854 LINC00208Q96KT6 92 aa4.71□□□□□ -1.66
NEDD9-216ENST00000620854 DHRS4-AS1Q9P1J3 65 aa4.71□□□□□ -1.66
NEDD9-216ENST00000620854 MUC7Q8TAX7 377 aa4.71□□□□□ -1.66
NEDD9-216ENST00000620854 LINC00474Q9P2X8 69 aa4.71□□□□□ -1.66
NEDD9-216ENST00000620854 IGLV9-49A0A0B4J1Y8 123 aa4.71□□□□□ -1.66
NEDD9-216ENST00000620854 A0A1B0GUV1 79 aa4.71□□□□□ -1.66
NEDD9-216ENST00000620854 LINC00336Q6ZUF6 198 aa4.71□□□□□ -1.66
NEDD9-216ENST00000620854 NBEAL1Q6ZS30 2694 aa4.7□□□□□ -1.66
NEDD9-216ENST00000620854 Q6ZRU5 148 aa4.7□□□□□ -1.66
NEDD9-216ENST00000620854 C4orf48Q5BLP8 95 aa4.69□□□□□ -1.66
NEDD9-216ENST00000620854 A0A087WSZ3 146 aa4.69□□□□□ -1.66
NEDD9-216ENST00000620854 A6NED7 52 aa4.69□□□□□ -1.66
NEDD9-216ENST00000620854 PSPHP1O15172 72 aa4.69□□□□□ -1.66
NEDD9-216ENST00000620854 LYPD5Q6UWN5 251 aa4.69□□□□□ -1.66
NEDD9-216ENST00000620854 TMEM254Q8TBM7 123 aa4.69□□□□□ -1.66
NEDD9-216ENST00000620854 LINC00167Q96N53 147 aa4.68□□□□□ -1.66
NEDD9-216ENST00000620854 SERP1Q9Y6X1 66 aa4.68□□□□□ -1.66
NEDD9-216ENST00000620854 C14orf177Q52M58 125 aa4.68□□□□□ -1.66
NEDD9-216ENST00000620854 PRYO14603 147 aa4.67□□□□□ -1.66
NEDD9-216ENST00000620854 KRTAP10-3P60369 221 aa4.67□□□□□ -1.66
NEDD9-216ENST00000620854 ATP5EP56381 51 aaPredicted RBP4.67□□□□□ -1.66
NEDD9-216ENST00000620854 PRLHP81277 87 aa4.67□□□□□ -1.66
NEDD9-216ENST00000620854 V9GYY9 64 aa4.67□□□□□ -1.66
NEDD9-216ENST00000620854 X6R8D5 127 aa4.67□□□□□ -1.66
NEDD9-216ENST00000620854 OTOGQ6ZRI0 2925 aa4.66□□□□□ -1.66
NEDD9-216ENST00000620854 PCOTHQ58A44 107 aa4.66□□□□□ -1.66
NEDD9-216ENST00000620854 C1orf195Q5TG92 126 aa4.66□□□□□ -1.66
NEDD9-216ENST00000620854 TENM4Q6N022 2769 aa4.65□□□□□ -1.66
NEDD9-216ENST00000620854 FBN1P35555 2871 aaKnown RBP4.65□□□□□ -1.67
NEDD9-216ENST00000620854 TRBV7-6A0A0J9YX20 115 aa4.65□□□□□ -1.67
NEDD9-216ENST00000620854 CASC2Q6XLA1 102 aa4.65□□□□□ -1.67
NEDD9-216ENST00000620854 NUPR2A6NF83 97 aa4.65□□□□□ -1.67
NEDD9-216ENST00000620854 FP248Q71RG6 208 aaPredicted RBP4.65□□□□□ -1.67
NEDD9-216ENST00000620854 MRPL55Q7Z7F7 128 aaKnown RBP4.65□□□□□ -1.67
NEDD9-216ENST00000620854 C6orf48Q9UBA6 75 aa4.65□□□□□ -1.67
NEDD9-216ENST00000620854 IGLV6-57P01721 117 aa4.64□□□□□ -1.67
NEDD9-216ENST00000620854 TENM3Q9P273 2699 aa4.64□□□□□ -1.67
NEDD9-216ENST00000620854 LOC110117498A0A087WWA1 95 aa4.64□□□□□ -1.67
NEDD9-216ENST00000620854 KLKP1Q107X0 134 aa4.64□□□□□ -1.67
NEDD9-216ENST00000620854 REG3GQ6UW15 175 aa4.64□□□□□ -1.67
NEDD9-216ENST00000620854 PMAIP1Q13794 54 aa4.63□□□□□ -1.67
NEDD9-216ENST00000620854 C7orf33Q8WU49 177 aa4.63□□□□□ -1.67
NEDD9-216ENST00000620854 CSMD3Q7Z407 3707 aa4.63□□□□□ -1.67
NEDD9-216ENST00000620854 ESRGQ1W209 222 aa4.62□□□□□ -1.67
NEDD9-216ENST00000620854 SMIM29Q86T20 159 aa4.62□□□□□ -1.67
NEDD9-216ENST00000620854 Q9BRP9 147 aa4.62□□□□□ -1.67
NEDD9-216ENST00000620854 PRR15LQ9BU68 103 aa4.62□□□□□ -1.67
NEDD9-216ENST00000620854 FAM229BQ4G0N7 80 aa4.62□□□□□ -1.67
NEDD9-216ENST00000620854 Q8NAQ8 132 aa4.62□□□□□ -1.67
NEDD9-216ENST00000620854 LY6G6CO95867 125 aa4.62□□□□□ -1.67
NEDD9-216ENST00000620854 CXCL6P80162 114 aa4.62□□□□□ -1.67
NEDD9-216ENST00000620854 IGHV6-1A0A0B4J1U7 121 aa4.62□□□□□ -1.67
NEDD9-216ENST00000620854 NSD1Q96L73 2696 aaPredicted RBP4.61□□□□□ -1.67
NEDD9-216ENST00000620854 WIPF1O43516 503 aa4.61□□□□□ -1.67
NEDD9-216ENST00000620854 SRRM2Q9UQ35 2752 aaKnown RBP4.61□□□□□ -1.67
NEDD9-216ENST00000620854 TRBV7-4A0A0J9YYF1 115 aa4.61□□□□□ -1.67
NEDD9-216ENST00000620854 SEC61GP60059 68 aa4.61□□□□□ -1.67
NEDD9-216ENST00000620854 RETNLBQ9BQ08 111 aa4.61□□□□□ -1.67
NEDD9-216ENST00000620854 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
NEDD9-216ENST00000620854 H0Y9P7 68 aa4.6□□□□□ -1.67
NEDD9-216ENST00000620854 KRTAP10-11P60412 298 aa4.6□□□□□ -1.67
NEDD9-216ENST00000620854 LINC00612Q8N6U2 182 aa4.6□□□□□ -1.67
NEDD9-216ENST00000620854 CIRBP-AS1Q8TBR5 109 aa4.6□□□□□ -1.67
NEDD9-216ENST00000620854 HCG22E2RYF7 251 aa4.59□□□□□ -1.67
NEDD9-216ENST00000620854 ELOF1P60002 83 aaKnown RBP4.59□□□□□ -1.67
NEDD9-216ENST00000620854 A0A0G2JQZ4 141 aa4.59□□□□□ -1.68
NEDD9-216ENST00000620854 A0A1W2PNN7 141 aa4.59□□□□□ -1.68
NEDD9-216ENST00000620854 ST20-AS1Q8NBB2 130 aa4.59□□□□□ -1.68
NEDD9-216ENST00000620854 K7EIL1 84 aa4.58□□□□□ -1.68
NEDD9-216ENST00000620854 VPREB1P12018 145 aa4.58□□□□□ -1.68
NEDD9-216ENST00000620854 LINC01556Q5JQF7 62 aa4.58□□□□□ -1.68
NEDD9-216ENST00000620854 H3BNG1 76 aa4.57□□□□□ -1.68
NEDD9-216ENST00000620854 Q6ZRP5 223 aa4.57□□□□□ -1.68
NEDD9-216ENST00000620854 ANK3Q12955 4377 aaKnown RBP4.57□□□□□ -1.68
NEDD9-216ENST00000620854 MDFIQ99750 246 aa4.56□□□□□ -1.68
NEDD9-216ENST00000620854 EPM2AB3EWF7 344 aa4.56□□□□□ -1.68
NEDD9-216ENST00000620854 LINC00528Q8N1L1 170 aa4.56□□□□□ -1.68
NEDD9-216ENST00000620854 PRR34Q9NV39 138 aa4.56□□□□□ -1.68
NEDD9-216ENST00000620854 BCE1O60756 84 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms