RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 CEND1Q8N111 149 aa8.29□□□□□ -1.08
NEK3-210ENST00000620675 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
NEK3-210ENST00000620675 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
NEK3-210ENST00000620675 INAFM2P0DMQ5 153 aa8.28□□□□□ -1.08
NEK3-210ENST00000620675 SPRR1AP35321 89 aa8.28□□□□□ -1.08
NEK3-210ENST00000620675 TRAV23DV6A0A075B6W5 121 aa8.28□□□□□ -1.08
NEK3-210ENST00000620675 A6NDN8 102 aa8.28□□□□□ -1.08
NEK3-210ENST00000620675 FAM19A1Q7Z5A9 133 aa8.28□□□□□ -1.08
NEK3-210ENST00000620675 CFC1BP0CG36 223 aa8.27□□□□□ -1.09
NEK3-210ENST00000620675 CFC1P0CG37 223 aa8.27□□□□□ -1.09
NEK3-210ENST00000620675 TAL2Q16559 108 aa8.26□□□□□ -1.09
NEK3-210ENST00000620675 ZNF861PO60384 105 aa8.26□□□□□ -1.09
NEK3-210ENST00000620675 HSD52Q0P140 79 aa8.26□□□□□ -1.09
NEK3-210ENST00000620675 ZNF73O43830 326 aaPredicted RBP8.25□□□□□ -1.09
NEK3-210ENST00000620675 UBE2AP49459 152 aa8.25□□□□□ -1.09
NEK3-210ENST00000620675 TNXBP22105 4242 aa8.25□□□□□ -1.09
NEK3-210ENST00000620675 CTAG1AP78358 180 aa8.24□□□□□ -1.09
NEK3-210ENST00000620675 TRAV13-2A0A0B4J235 113 aa8.23□□□□□ -1.09
NEK3-210ENST00000620675 B5MCH6 92 aa8.23□□□□□ -1.09
NEK3-210ENST00000620675 RPL13AP40429 203 aaKnown RBP8.23□□□□□ -1.09
NEK3-210ENST00000620675 SPINK6Q6UWN8 80 aa8.23□□□□□ -1.09
NEK3-210ENST00000620675 SMIM11BQ8TCY0 68 aa8.23□□□□□ -1.09
NEK3-210ENST00000620675 ETDCA0A1B0GVM5 59 aa8.23□□□□□ -1.09
NEK3-210ENST00000620675 C6orf99Q4VX62 202 aa8.23□□□□□ -1.09
NEK3-210ENST00000620675 K7ERJ3 54 aa8.22□□□□□ -1.09
NEK3-210ENST00000620675 Q9BRP9 147 aa8.22□□□□□ -1.09
NEK3-210ENST00000620675 HIGD2AQ9BW72 106 aa8.22□□□□□ -1.09
NEK3-210ENST00000620675 TSTD3H0UI37 97 aa8.22□□□□□ -1.09
NEK3-210ENST00000620675 H0Y9J4 135 aa8.22□□□□□ -1.09
NEK3-210ENST00000620675 H7C2G1 150 aa8.22□□□□□ -1.09
NEK3-210ENST00000620675 RPL28P46779 137 aaKnown RBP8.22□□□□□ -1.09
NEK3-210ENST00000620675 BVES-AS1Q5T3Y7 98 aa8.21□□□□□ -1.1
NEK3-210ENST00000620675 SMCR5Q8TEV8 140 aa8.21□□□□□ -1.1
NEK3-210ENST00000620675 NHP2Q9NX24 153 aaKnown RBP8.21□□□□□ -1.1
NEK3-210ENST00000620675 DMBT1Q9UGM3 2413 aaPredicted RBP8.21□□□□□ -1.1
NEK3-210ENST00000620675 ERC2-IT1O76042 136 aa8.2□□□□□ -1.1
NEK3-210ENST00000620675 HINT1P49773 126 aaPredicted RBP8.2□□□□□ -1.1
NEK3-210ENST00000620675 Q6ZRX8 168 aa8.2□□□□□ -1.1
NEK3-210ENST00000620675 DIRC1Q969H9 104 aa8.2□□□□□ -1.1
NEK3-210ENST00000620675 A0A0B4J2C4 111 aa8.19□□□□□ -1.1
NEK3-210ENST00000620675 RAB37Q96AX2 223 aa8.19□□□□□ -1.1
NEK3-210ENST00000620675 ANAPC11Q9NYG5 84 aa8.19□□□□□ -1.1
NEK3-210ENST00000620675 KRTAP1-4P0C5Y4 121 aa8.18□□□□□ -1.1
NEK3-210ENST00000620675 TMEM238LA0A1B0GVL6 79 aa8.17□□□□□ -1.1
NEK3-210ENST00000620675 A6NJY4 79 aa8.17□□□□□ -1.1
NEK3-210ENST00000620675 ELOF1P60002 83 aaKnown RBP8.17□□□□□ -1.1
NEK3-210ENST00000620675 PRO1854Q9UHT4 67 aa8.16□□□□□ -1.1
NEK3-210ENST00000620675 A0A1B0GWB2 263 aa8.15□□□□□ -1.1
NEK3-210ENST00000620675 COX7BP24311 80 aa8.15□□□□□ -1.1
NEK3-210ENST00000620675 CBY1Q9Y3M2 126 aa8.14□□□□□ -1.11
NEK3-210ENST00000620675 ST20-AS1Q8NBB2 130 aa8.14□□□□□ -1.11
NEK3-210ENST00000620675 HERC1Q15751 4861 aa8.12□□□□□ -1.11
NEK3-210ENST00000620675 A0A087X002 238 aa8.12□□□□□ -1.11
NEK3-210ENST00000620675 TRBV7-6A0A0J9YX20 115 aa8.12□□□□□ -1.11
NEK3-210ENST00000620675 MT1HL1P0DM35 61 aa8.12□□□□□ -1.11
NEK3-210ENST00000620675 BATFQ16520 125 aa8.12□□□□□ -1.11
NEK3-210ENST00000620675 Q1RN00 199 aa8.12□□□□□ -1.11
NEK3-210ENST00000620675 PRR26Q8N8Z3 221 aa8.12□□□□□ -1.11
NEK3-210ENST00000620675 SPRR4Q96PI1 79 aa8.12□□□□□ -1.11
NEK3-210ENST00000620675 TSPAN13O95857 204 aa8.11□□□□□ -1.11
NEK3-210ENST00000620675 LINC01600Q96MT4 127 aa8.11□□□□□ -1.11
NEK3-210ENST00000620675 M0R143 59 aa8.1□□□□□ -1.11
NEK3-210ENST00000620675 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
NEK3-210ENST00000620675 TRIAP1O43715 76 aa8.1□□□□□ -1.11
NEK3-210ENST00000620675 FAM218AQ96MZ4 157 aa8.09□□□□□ -1.11
NEK3-210ENST00000620675 GAGE2AQ6NT46 116 aa8.09□□□□□ -1.11
NEK3-210ENST00000620675 NAA38Q9BRA0 125 aaKnown RBP8.09□□□□□ -1.11
NEK3-210ENST00000620675 KRTAP13-2Q52LG2 175 aa8.08□□□□□ -1.12
NEK3-210ENST00000620675 LINC00575Q6W349 94 aa8.08□□□□□ -1.12
NEK3-210ENST00000620675 DHRS4-AS1Q9P1J3 65 aa8.08□□□□□ -1.12
NEK3-210ENST00000620675 PCP4L1A6NKN8 68 aa8.07□□□□□ -1.12
NEK3-210ENST00000620675 OXTP01178 125 aa8.07□□□□□ -1.12
NEK3-210ENST00000620675 KRTAP10-8P60410 259 aa8.07□□□□□ -1.12
NEK3-210ENST00000620675 VAMP3Q15836 100 aa8.06□□□□□ -1.12
NEK3-210ENST00000620675 C3orf22Q8N5N4 141 aa8.06□□□□□ -1.12
NEK3-210ENST00000620675 CLEC2BQ92478 149 aa8.06□□□□□ -1.12
NEK3-210ENST00000620675 DEFB105AQ8NG35 78 aa8.05□□□□□ -1.12
NEK3-210ENST00000620675 SNHG12Q9BXW3 62 aa8.05□□□□□ -1.12
NEK3-210ENST00000620675 LINC01547P58512 204 aaPredicted RBP8.04□□□□□ -1.12
NEK3-210ENST00000620675 LINC00483Q53H64 154 aa8.04□□□□□ -1.12
NEK3-210ENST00000620675 PSMB2P49721 201 aa8.04□□□□□ -1.12
NEK3-210ENST00000620675 hADV29S1A0JD25 119 aa8.03□□□□□ -1.12
NEK3-210ENST00000620675 J3QL48 77 aa8.03□□□□□ -1.12
NEK3-210ENST00000620675 ZNF706Q9Y5V0 76 aaPredicted RBP8.03□□□□□ -1.12
NEK3-210ENST00000620675 CRYGAP11844 174 aa8.02□□□□□ -1.12
NEK3-210ENST00000620675 Q6ZQY7 126 aa8.02□□□□□ -1.12
NEK3-210ENST00000620675 FAM229BQ4G0N7 80 aa8.01□□□□□ -1.13
NEK3-210ENST00000620675 H0YGX0 51 aa8.01□□□□□ -1.13
NEK3-210ENST00000620675 SLC25A20O43772 301 aa8.01□□□□□ -1.13
NEK3-210ENST00000620675 Q8N377 158 aa8□□□□□ -1.13
NEK3-210ENST00000620675 IGLV5-48A0A075B6I7 105 aa7.99□□□□□ -1.13
NEK3-210ENST00000620675 IGLV9-49A0A0B4J1Y8 123 aa7.99□□□□□ -1.13
NEK3-210ENST00000620675 TAX1BP3O14907 124 aa7.99□□□□□ -1.13
NEK3-210ENST00000620675 SPRR1BP22528 89 aa7.99□□□□□ -1.13
NEK3-210ENST00000620675 SMIM29Q86T20 159 aa7.99□□□□□ -1.13
NEK3-210ENST00000620675 TYMSOSQ8TAI1 123 aa7.98□□□□□ -1.13
NEK3-210ENST00000620675 TEX49A0A1B0GTD5 131 aa7.97□□□□□ -1.13
NEK3-210ENST00000620675 SCGB1C2P0DMR2 95 aa7.97□□□□□ -1.13
NEK3-210ENST00000620675 H3BUT2 72 aa7.96□□□□□ -1.13
NEK3-210ENST00000620675 MOBPQ13875 183 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms