RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 LINC00337Q8N6G1 96 aa5.05□□□□□ -1.6
CPNE3-209ENST00000620393 C7orf33Q8WU49 177 aa5.05□□□□□ -1.6
CPNE3-209ENST00000620393 RAB37Q96AX2 223 aa5.05□□□□□ -1.6
CPNE3-209ENST00000620393 LINC00167Q96N53 147 aa5.05□□□□□ -1.6
CPNE3-209ENST00000620393 TMEM126AQ9H061 195 aa5.05□□□□□ -1.6
CPNE3-209ENST00000620393 PRO1854Q9UHT4 67 aa5.05□□□□□ -1.6
CPNE3-209ENST00000620393 DYNC1H1Q14204 4646 aaKnown RBP5.04□□□□□ -1.6
CPNE3-209ENST00000620393 M0QXV9 152 aa5.04□□□□□ -1.6
CPNE3-209ENST00000620393 IGLV6-57P01721 117 aa5.04□□□□□ -1.6
CPNE3-209ENST00000620393 S100A7L2Q5SY68 101 aa5.04□□□□□ -1.6
CPNE3-209ENST00000620393 OR13C6PQ8NH95 151 aa5.04□□□□□ -1.6
CPNE3-209ENST00000620393 CIRBP-AS1Q8TBR5 109 aa5.04□□□□□ -1.6
CPNE3-209ENST00000620393 LRP1BQ9NZR2 4599 aa5.04□□□□□ -1.6
CPNE3-209ENST00000620393 IGLV1-50A0A075B6I6 118 aa5.03□□□□□ -1.6
CPNE3-209ENST00000620393 TRBV10-3A0A0K0K1G6 114 aa5.03□□□□□ -1.6
CPNE3-209ENST00000620393 GAGE10A6NGK3 116 aa5.03□□□□□ -1.6
CPNE3-209ENST00000620393 K7ERJ3 54 aa5.03□□□□□ -1.6
CPNE3-209ENST00000620393 PHF5AQ7RTV0 110 aaKnown RBP5.03□□□□□ -1.6
CPNE3-209ENST00000620393 RPL37AP8A6NKH3 93 aa5.02□□□□□ -1.61
CPNE3-209ENST00000620393 RPL13AP40429 203 aaKnown RBP5.02□□□□□ -1.61
CPNE3-209ENST00000620393 COL5A1-AS1Q5SY13 56 aa5.02□□□□□ -1.61
CPNE3-209ENST00000620393 SCXQ7RTU7 201 aa5.02□□□□□ -1.61
CPNE3-209ENST00000620393 KCNQ1DNQ9H478 68 aa5.02□□□□□ -1.61
CPNE3-209ENST00000620393 CBY1Q9Y3M2 126 aa5.02□□□□□ -1.61
CPNE3-209ENST00000620393 PKHD1P08F94 4074 aa5.01□□□□□ -1.61
CPNE3-209ENST00000620393 XGP55808 180 aa5.01□□□□□ -1.61
CPNE3-209ENST00000620393 H7C2G1 150 aa5□□□□□ -1.61
CPNE3-209ENST00000620393 TAX1BP3O14907 124 aa5□□□□□ -1.61
CPNE3-209ENST00000620393 RPL28P46779 137 aaKnown RBP5□□□□□ -1.61
CPNE3-209ENST00000620393 UBE2BP63146 152 aa5□□□□□ -1.61
CPNE3-209ENST00000620393 SMIM11BQ8TCY0 68 aa5□□□□□ -1.61
CPNE3-209ENST00000620393 TRAV23DV6A0A075B6W5 121 aa4.99□□□□□ -1.61
CPNE3-209ENST00000620393 PRYO14603 147 aa4.99□□□□□ -1.61
CPNE3-209ENST00000620393 TSPAN13O95857 204 aa4.99□□□□□ -1.61
CPNE3-209ENST00000620393 HAMPP81172 84 aa4.99□□□□□ -1.61
CPNE3-209ENST00000620393 Q1RN00 199 aa4.99□□□□□ -1.61
CPNE3-209ENST00000620393 KRTAP11-1Q8IUC1 163 aa4.99□□□□□ -1.61
CPNE3-209ENST00000620393 C9orf118A6NHY6 69 aa4.98□□□□□ -1.61
CPNE3-209ENST00000620393 ZNF73O43830 326 aaPredicted RBP4.98□□□□□ -1.61
CPNE3-209ENST00000620393 SPRR1AP35321 89 aa4.98□□□□□ -1.61
CPNE3-209ENST00000620393 REG3GQ6UW15 175 aa4.98□□□□□ -1.61
CPNE3-209ENST00000620393 TRBV7-6A0A0J9YX20 115 aa4.97□□□□□ -1.61
CPNE3-209ENST00000620393 KRTAP4-16G5E9R7 235 aaPredicted RBP4.97□□□□□ -1.61
CPNE3-209ENST00000620393 PSMB2P49721 201 aa4.97□□□□□ -1.61
CPNE3-209ENST00000620393 VAMP3Q15836 100 aa4.97□□□□□ -1.61
CPNE3-209ENST00000620393 C6orf99Q4VX62 202 aa4.97□□□□□ -1.61
CPNE3-209ENST00000620393 DIRC1Q969H9 104 aa4.97□□□□□ -1.61
CPNE3-209ENST00000620393 H0YGX0 51 aa4.96□□□□□ -1.62
CPNE3-209ENST00000620393 H3BUT2 72 aa4.96□□□□□ -1.62
CPNE3-209ENST00000620393 TRIAP1O43715 76 aa4.96□□□□□ -1.62
CPNE3-209ENST00000620393 CDK2AP2O75956 126 aa4.96□□□□□ -1.62
CPNE3-209ENST00000620393 COX6CP09669 75 aa4.96□□□□□ -1.62
CPNE3-209ENST00000620393 SCGB1C2P0DMR2 95 aa4.96□□□□□ -1.62
CPNE3-209ENST00000620393 PSORS1C2Q9UIG4 136 aa4.96□□□□□ -1.62
CPNE3-209ENST00000620393 ETDCA0A1B0GVM5 59 aa4.95□□□□□ -1.62
CPNE3-209ENST00000620393 B5MCH6 92 aa4.95□□□□□ -1.62
CPNE3-209ENST00000620393 BCE1O60756 84 aa4.95□□□□□ -1.62
CPNE3-209ENST00000620393 COX7BP24311 80 aa4.95□□□□□ -1.62
CPNE3-209ENST00000620393 NAA38Q9BRA0 125 aaKnown RBP4.95□□□□□ -1.62
CPNE3-209ENST00000620393 APOBP04114 4563 aaKnown RBP4.95□□□□□ -1.62
CPNE3-209ENST00000620393 SMR3BP02814 79 aaPredicted RBP4.94□□□□□ -1.62
CPNE3-209ENST00000620393 INAFM2P0DMQ5 153 aa4.94□□□□□ -1.62
CPNE3-209ENST00000620393 ELOF1P60002 83 aaKnown RBP4.94□□□□□ -1.62
CPNE3-209ENST00000620393 C1orf137Q5JT78 98 aa4.94□□□□□ -1.62
CPNE3-209ENST00000620393 A0A1W2PPM0 123 aa4.93□□□□□ -1.62
CPNE3-209ENST00000620393 H0Y9J4 135 aa4.93□□□□□ -1.62
CPNE3-209ENST00000620393 LINC00575Q6W349 94 aa4.93□□□□□ -1.62
CPNE3-209ENST00000620393 FAM19A1Q7Z5A9 133 aa4.93□□□□□ -1.62
CPNE3-209ENST00000620393 IGLV7-43P04211 117 aa4.92□□□□□ -1.62
CPNE3-209ENST00000620393 FABP2P12104 132 aa4.92□□□□□ -1.62
CPNE3-209ENST00000620393 UBE2AP49459 152 aa4.92□□□□□ -1.62
CPNE3-209ENST00000620393 LYRM7Q5U5X0 104 aa4.92□□□□□ -1.62
CPNE3-209ENST00000620393 Q6ZRX8 168 aa4.92□□□□□ -1.62
CPNE3-209ENST00000620393 KRTAP13-1Q8IUC0 172 aa4.92□□□□□ -1.62
CPNE3-209ENST00000620393 EPPK1P58107 5090 aaKnown RBP4.91□□□□□ -1.62
CPNE3-209ENST00000620393 TRBV20-1A0A075B6N2 111 aa4.91□□□□□ -1.62
CPNE3-209ENST00000620393 A0A1B0GX51 115 aa4.91□□□□□ -1.62
CPNE3-209ENST00000620393 SLC25A20O43772 301 aa4.91□□□□□ -1.62
CPNE3-209ENST00000620393 ZNF861PO60384 105 aa4.91□□□□□ -1.62
CPNE3-209ENST00000620393 SNCGO76070 127 aa4.91□□□□□ -1.62
CPNE3-209ENST00000620393 RPL37AP61513 92 aaKnown RBP4.91□□□□□ -1.62
CPNE3-209ENST00000620393 FAM218AQ96MZ4 157 aa4.91□□□□□ -1.62
CPNE3-209ENST00000620393 Q9BRP9 147 aa4.91□□□□□ -1.62
CPNE3-209ENST00000620393 DHRS4-AS1Q9P1J3 65 aa4.91□□□□□ -1.62
CPNE3-209ENST00000620393 hADV29S1A0JD25 119 aa4.9□□□□□ -1.63
CPNE3-209ENST00000620393 LST1O00453 97 aa4.9□□□□□ -1.63
CPNE3-209ENST00000620393 TCL1BO95988 128 aa4.9□□□□□ -1.63
CPNE3-209ENST00000620393 PRLHP81277 87 aa4.9□□□□□ -1.63
CPNE3-209ENST00000620393 SMCR5Q8TEV8 140 aa4.9□□□□□ -1.63
CPNE3-209ENST00000620393 CLEC2BQ92478 149 aa4.9□□□□□ -1.63
CPNE3-209ENST00000620393 TRACP01848 142 aa4.89□□□□□ -1.63
CPNE3-209ENST00000620393 ATXN8Q156A1 80 aa4.89□□□□□ -1.63
CPNE3-209ENST00000620393 SPCS1Q9Y6A9 102 aa4.89□□□□□ -1.63
CPNE3-209ENST00000620393 VPS13BQ7Z7G8 4022 aa4.88□□□□□ -1.63
CPNE3-209ENST00000620393 HSPG2P98160 4391 aa4.88□□□□□ -1.63
CPNE3-209ENST00000620393 ERC2-IT1O76042 136 aa4.88□□□□□ -1.63
CPNE3-209ENST00000620393 HIGD2AQ9BW72 106 aa4.88□□□□□ -1.63
CPNE3-209ENST00000620393 FAT1Q14517 4588 aa4.88□□□□□ -1.63
CPNE3-209ENST00000620393 RYR1P21817 5038 aa4.88□□□□□ -1.63
CPNE3-209ENST00000620393 PLA2G1BP04054 148 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms