RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 A0A0B4J2C4 111 aa13.96□□□□□ -0.17
CBWD3-213ENST00000618217 C9orf118A6NHY6 69 aa13.96□□□□□ -0.17
CBWD3-213ENST00000618217 NAA38Q9BRA0 125 aaKnown RBP13.96□□□□□ -0.17
CBWD3-213ENST00000618217 TRBV10-3A0A0K0K1G6 114 aa13.95□□□□□ -0.18
CBWD3-213ENST00000618217 IGLV6-57P01721 117 aa13.94□□□□□ -0.18
CBWD3-213ENST00000618217 H3BUT2 72 aa13.93□□□□□ -0.18
CBWD3-213ENST00000618217 LINC00337Q8N6G1 96 aa13.93□□□□□ -0.18
CBWD3-213ENST00000618217 PRO1854Q9UHT4 67 aa13.93□□□□□ -0.18
CBWD3-213ENST00000618217 C1orf137Q5JT78 98 aa13.93□□□□□ -0.18
CBWD3-213ENST00000618217 KCNQ1DNQ9H478 68 aa13.92□□□□□ -0.18
CBWD3-213ENST00000618217 TSPAN13O95857 204 aa13.9□□□□□ -0.19
CBWD3-213ENST00000618217 S100A7L2Q5SY68 101 aa13.9□□□□□ -0.19
CBWD3-213ENST00000618217 TMEM126AQ9H061 195 aa13.9□□□□□ -0.19
CBWD3-213ENST00000618217 REG3GQ6UW15 175 aa13.89□□□□□ -0.19
CBWD3-213ENST00000618217 IGLV7-43P04211 117 aa13.88□□□□□ -0.19
CBWD3-213ENST00000618217 H7C2G1 150 aa13.87□□□□□ -0.19
CBWD3-213ENST00000618217 PRYO14603 147 aa13.87□□□□□ -0.19
CBWD3-213ENST00000618217 BCE1O60756 84 aa13.87□□□□□ -0.19
CBWD3-213ENST00000618217 A0A1W2PPM0 123 aa13.86□□□□□ -0.19
CBWD3-213ENST00000618217 SPRR1AP35321 89 aa13.86□□□□□ -0.19
CBWD3-213ENST00000618217 VAMP3Q15836 100 aa13.86□□□□□ -0.19
CBWD3-213ENST00000618217 RPL13AP40429 203 aaKnown RBP13.86□□□□□ -0.19
CBWD3-213ENST00000618217 Q1RN00 199 aa13.86□□□□□ -0.19
CBWD3-213ENST00000618217 OR13C6PQ8NH95 151 aa13.86□□□□□ -0.19
CBWD3-213ENST00000618217 KRTAP4-16G5E9R7 235 aaPredicted RBP13.85□□□□□ -0.19
CBWD3-213ENST00000618217 KRTAP13-1Q8IUC0 172 aa13.83□□□□□ -0.2
CBWD3-213ENST00000618217 FABP2P12104 132 aa13.82□□□□□ -0.2
CBWD3-213ENST00000618217 TRAV23DV6A0A075B6W5 121 aa13.82□□□□□ -0.2
CBWD3-213ENST00000618217 TRAV13-2A0A0B4J235 113 aa13.82□□□□□ -0.2
CBWD3-213ENST00000618217 ZNF861PO60384 105 aa13.79□□□□□ -0.2
CBWD3-213ENST00000618217 PSMB2P49721 201 aa13.79□□□□□ -0.2
CBWD3-213ENST00000618217 SPINK6Q6UWN8 80 aa13.79□□□□□ -0.2
CBWD3-213ENST00000618217 CBY1Q9Y3M2 126 aa13.79□□□□□ -0.2
CBWD3-213ENST00000618217 SPCS1Q9Y6A9 102 aa13.79□□□□□ -0.2
CBWD3-213ENST00000618217 ZNF73O43830 326 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-213ENST00000618217 FAM19A1Q7Z5A9 133 aa13.78□□□□□ -0.2
CBWD3-213ENST00000618217 PKHD1L1Q86WI1 4243 aa13.77□□□□□ -0.21
CBWD3-213ENST00000618217 ABCA13Q86UQ4 5058 aa13.76□□□□□ -0.21
CBWD3-213ENST00000618217 H0Y9J4 135 aa13.76□□□□□ -0.21
CBWD3-213ENST00000618217 K7EP34 96 aa13.75□□□□□ -0.21
CBWD3-213ENST00000618217 INAFM2P0DMQ5 153 aa13.75□□□□□ -0.21
CBWD3-213ENST00000618217 RPL28P46779 137 aaKnown RBP13.75□□□□□ -0.21
CBWD3-213ENST00000618217 UBE2AP49459 152 aa13.75□□□□□ -0.21
CBWD3-213ENST00000618217 PRLHP81277 87 aa13.75□□□□□ -0.21
CBWD3-213ENST00000618217 B5MCH6 92 aa13.75□□□□□ -0.21
CBWD3-213ENST00000618217 LYRM7Q5U5X0 104 aa13.75□□□□□ -0.21
CBWD3-213ENST00000618217 FLG2Q5D862 2391 aaPredicted RBP13.74□□□□□ -0.21
CBWD3-213ENST00000618217 ETDCA0A1B0GVM5 59 aa13.74□□□□□ -0.21
CBWD3-213ENST00000618217 TRIAP1O43715 76 aa13.73□□□□□ -0.21
CBWD3-213ENST00000618217 SCGB1C2P0DMR2 95 aa13.73□□□□□ -0.21
CBWD3-213ENST00000618217 GTF2H5Q6ZYL4 71 aa13.73□□□□□ -0.21
CBWD3-213ENST00000618217 SMIM11BQ8TCY0 68 aa13.73□□□□□ -0.21
CBWD3-213ENST00000618217 UBE2V1Q13404 147 aa13.72□□□□□ -0.21
CBWD3-213ENST00000618217 C6orf99Q4VX62 202 aa13.72□□□□□ -0.21
CBWD3-213ENST00000618217 DIRC1Q969H9 104 aa13.72□□□□□ -0.21
CBWD3-213ENST00000618217 Q6ZRX8 168 aa13.71□□□□□ -0.22
CBWD3-213ENST00000618217 COX6CP09669 75 aa13.68□□□□□ -0.22
CBWD3-213ENST00000618217 TRBV7-6A0A0J9YX20 115 aa13.68□□□□□ -0.22
CBWD3-213ENST00000618217 Q9BRP9 147 aa13.68□□□□□ -0.22
CBWD3-213ENST00000618217 SMCR5Q8TEV8 140 aa13.67□□□□□ -0.22
CBWD3-213ENST00000618217 ELOF1P60002 83 aaKnown RBP13.66□□□□□ -0.22
CBWD3-213ENST00000618217 HIGD2AQ9BW72 106 aa13.66□□□□□ -0.22
CBWD3-213ENST00000618217 TCL1BO95988 128 aa13.65□□□□□ -0.22
CBWD3-213ENST00000618217 PCLOQ9Y6V0 5065 aa13.65□□□□□ -0.22
CBWD3-213ENST00000618217 TRBV20-1A0A075B6N2 111 aa13.64□□□□□ -0.23
CBWD3-213ENST00000618217 COX7BP24311 80 aa13.63□□□□□ -0.23
CBWD3-213ENST00000618217 H3BMG7 143 aa13.62□□□□□ -0.23
CBWD3-213ENST00000618217 ERC2-IT1O76042 136 aa13.61□□□□□ -0.23
CBWD3-213ENST00000618217 KRTAP1-4P0C5Y4 121 aa13.61□□□□□ -0.23
CBWD3-213ENST00000618217 MYCBP2O75592 4640 aa13.61□□□□□ -0.23
CBWD3-213ENST00000618217 CLEC2BQ92478 149 aa13.61□□□□□ -0.23
CBWD3-213ENST00000618217 ATXN8Q156A1 80 aa13.59□□□□□ -0.23
CBWD3-213ENST00000618217 DHRS4-AS1Q9P1J3 65 aa13.57□□□□□ -0.24
CBWD3-213ENST00000618217 LRP1Q07954 4544 aaKnown RBP13.56□□□□□ -0.24
CBWD3-213ENST00000618217 LST1O00453 97 aa13.54□□□□□ -0.24
CBWD3-213ENST00000618217 MTURNQ8N3F0 131 aa13.54□□□□□ -0.24
CBWD3-213ENST00000618217 LINC01600Q96MT4 127 aa13.54□□□□□ -0.24
CBWD3-213ENST00000618217 OXTP01178 125 aa13.53□□□□□ -0.24
CBWD3-213ENST00000618217 SPRR4Q96PI1 79 aa13.53□□□□□ -0.24
CBWD3-213ENST00000618217 KRTAP29-1A8MX34 341 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-213ENST00000618217 H0YGX0 51 aa13.52□□□□□ -0.25
CBWD3-213ENST00000618217 LINC00575Q6W349 94 aa13.52□□□□□ -0.25
CBWD3-213ENST00000618217 FAM218AQ96MZ4 157 aa13.51□□□□□ -0.25
CBWD3-213ENST00000618217 FAT3Q8TDW7 4589 aa13.5□□□□□ -0.25
CBWD3-213ENST00000618217 ANAPC11Q9NYG5 84 aa13.5□□□□□ -0.25
CBWD3-213ENST00000618217 ZNF706Q9Y5V0 76 aaPredicted RBP13.5□□□□□ -0.25
CBWD3-213ENST00000618217 C9JAW5 83 aa13.49□□□□□ -0.25
CBWD3-213ENST00000618217 ST20-AS1Q8NBB2 130 aa13.49□□□□□ -0.25
CBWD3-213ENST00000618217 PRO0461Q9UI25 63 aa13.49□□□□□ -0.25
CBWD3-213ENST00000618217 F8W1H4 67 aa13.47□□□□□ -0.25
CBWD3-213ENST00000618217 LINC00483Q53H64 154 aa13.47□□□□□ -0.25
CBWD3-213ENST00000618217 MT1HL1P0DM35 61 aa13.46□□□□□ -0.25
CBWD3-213ENST00000618217 A0A087X002 238 aa13.46□□□□□ -0.26
CBWD3-213ENST00000618217 TRACP01848 142 aa13.46□□□□□ -0.26
CBWD3-213ENST00000618217 FAM229BQ4G0N7 80 aa13.46□□□□□ -0.26
CBWD3-213ENST00000618217 KRTAP10-8P60410 259 aa13.45□□□□□ -0.26
CBWD3-213ENST00000618217 PRR26Q8N8Z3 221 aa13.45□□□□□ -0.26
CBWD3-213ENST00000618217 hADV29S1A0JD25 119 aa13.44□□□□□ -0.26
CBWD3-213ENST00000618217 SLC25A20O43772 301 aa13.44□□□□□ -0.26
CBWD3-213ENST00000618217 GAGE2AQ6NT46 116 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms