RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-219	ENST00000617757	RPL37AP8	A6NKH3	93 aa		5.04	□□□□□ -1.6
TARDBP-219	ENST00000617757	HAMP	P81172	84 aa		5.04	□□□□□ -1.6
TARDBP-219	ENST00000617757	KCNQ1DN	Q9H478	68 aa		5.04	□□□□□ -1.6
TARDBP-219	ENST00000617757	TRAV23DV6	A0A075B6W5	121 aa		5.03	□□□□□ -1.6
TARDBP-219	ENST00000617757		H7C2G1	150 aa		5.03	□□□□□ -1.6
TARDBP-219	ENST00000617757	TAX1BP3	O14907	124 aa		5.03	□□□□□ -1.6
TARDBP-219	ENST00000617757	TSPAN13	O95857	204 aa		5.03	□□□□□ -1.6
TARDBP-219	ENST00000617757	XG	P55808	180 aa		5.03	□□□□□ -1.6
TARDBP-219	ENST00000617757	UBE2B	P63146	152 aa		5.03	□□□□□ -1.6
TARDBP-219	ENST00000617757		Q1RN00	199 aa		5.03	□□□□□ -1.6
TARDBP-219	ENST00000617757	COL5A1-AS1	Q5SY13	56 aa		5.03	□□□□□ -1.6
TARDBP-219	ENST00000617757	KRTAP11-1	Q8IUC1	163 aa		5.03	□□□□□ -1.6
TARDBP-219	ENST00000617757	SMIM11B	Q8TCY0	68 aa		5.03	□□□□□ -1.6
TARDBP-219	ENST00000617757	PRY	O14603	147 aa		5.02	□□□□□ -1.61
TARDBP-219	ENST00000617757	RPL28	P46779	137 aa	Known RBP	5.02	□□□□□ -1.61
TARDBP-219	ENST00000617757	SPRR1A	P35321	89 aa		5.01	□□□□□ -1.61
TARDBP-219	ENST00000617757	CBY1	Q9Y3M2	126 aa		5.01	□□□□□ -1.61
TARDBP-219	ENST00000617757	C9orf118	A6NHY6	69 aa		5	□□□□□ -1.61
TARDBP-219	ENST00000617757	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	5	□□□□□ -1.61
TARDBP-219	ENST00000617757	ZNF73	O43830	326 aa	Predicted RBP	5	□□□□□ -1.61
TARDBP-219	ENST00000617757	C6orf99	Q4VX62	202 aa		5	□□□□□ -1.61
TARDBP-219	ENST00000617757	REG3G	Q6UW15	175 aa		5	□□□□□ -1.61
TARDBP-219	ENST00000617757	DIRC1	Q969H9	104 aa		5	□□□□□ -1.61
TARDBP-219	ENST00000617757	NAA38	Q9BRA0	125 aa	Known RBP	5	□□□□□ -1.61
TARDBP-219	ENST00000617757		H3BUT2	72 aa		4.99	□□□□□ -1.61
TARDBP-219	ENST00000617757	TRIAP1	O43715	76 aa		4.99	□□□□□ -1.61
TARDBP-219	ENST00000617757	PSMB2	P49721	201 aa		4.99	□□□□□ -1.61
TARDBP-219	ENST00000617757	PSORS1C2	Q9UIG4	136 aa		4.99	□□□□□ -1.61
TARDBP-219	ENST00000617757	VPS13B	Q7Z7G8	4022 aa		4.99	□□□□□ -1.61
TARDBP-219	ENST00000617757	TRBV7-6	A0A0J9YX20	115 aa		4.98	□□□□□ -1.61
TARDBP-219	ENST00000617757	CDK2AP2	O75956	126 aa		4.98	□□□□□ -1.61
TARDBP-219	ENST00000617757	BIRC6	Q9NR09	4857 aa		4.98	□□□□□ -1.61
TARDBP-219	ENST00000617757	HSPG2	P98160	4391 aa		4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757	RYR1	P21817	5038 aa		4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757	ETDC	A0A1B0GVM5	59 aa		4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757		B5MCH6	92 aa		4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757	BCE1	O60756	84 aa		4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757	SMR3B	P02814	79 aa	Predicted RBP	4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757	COX6C	P09669	75 aa		4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757	SCGB1C2	P0DMR2	95 aa		4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757	COX7B	P24311	80 aa		4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757	ELOF1	P60002	83 aa	Known RBP	4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757	VAMP3	Q15836	100 aa		4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757	C1orf137	Q5JT78	98 aa		4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757	FAM19A1	Q7Z5A9	133 aa		4.97	□□□□□ -1.61
TARDBP-219	ENST00000617757		A0A1W2PPM0	123 aa		4.96	□□□□□ -1.62
TARDBP-219	ENST00000617757		H0YGX0	51 aa		4.96	□□□□□ -1.62
TARDBP-219	ENST00000617757		Q6ZRX8	168 aa		4.96	□□□□□ -1.62
TARDBP-219	ENST00000617757	KRTAP9-2	Q9BYQ4	174 aa		4.96	□□□□□ -1.62
TARDBP-219	ENST00000617757	PKHD1L1	Q86WI1	4243 aa		4.96	□□□□□ -1.62
TARDBP-219	ENST00000617757		H0Y9J4	135 aa		4.95	□□□□□ -1.62
TARDBP-219	ENST00000617757	FAM229A	H3BQW9	127 aa		4.95	□□□□□ -1.62
TARDBP-219	ENST00000617757	PRLH	P81277	87 aa		4.95	□□□□□ -1.62
TARDBP-219	ENST00000617757	CLEC2B	Q92478	149 aa		4.95	□□□□□ -1.62
TARDBP-219	ENST00000617757	FAT1	Q14517	4588 aa		4.94	□□□□□ -1.62
TARDBP-219	ENST00000617757	TCL1B	O95988	128 aa		4.94	□□□□□ -1.62
TARDBP-219	ENST00000617757	IGLV7-43	P04211	117 aa		4.94	□□□□□ -1.62
TARDBP-219	ENST00000617757	FABP2	P12104	132 aa		4.94	□□□□□ -1.62
TARDBP-219	ENST00000617757	UBE2A	P49459	152 aa		4.94	□□□□□ -1.62
TARDBP-219	ENST00000617757	LYRM7	Q5U5X0	104 aa		4.94	□□□□□ -1.62
TARDBP-219	ENST00000617757	LINC00575	Q6W349	94 aa		4.94	□□□□□ -1.62
TARDBP-219	ENST00000617757	KRTAP13-1	Q8IUC0	172 aa		4.94	□□□□□ -1.62
TARDBP-219	ENST00000617757	SMCR5	Q8TEV8	140 aa		4.94	□□□□□ -1.62
TARDBP-219	ENST00000617757	FAM218A	Q96MZ4	157 aa		4.94	□□□□□ -1.62
TARDBP-219	ENST00000617757		Q9BRP9	147 aa		4.94	□□□□□ -1.62
TARDBP-219	ENST00000617757	KRTAP9-6	A0A140TA67	174 aa		4.93	□□□□□ -1.62
TARDBP-219	ENST00000617757	LST1	O00453	97 aa		4.93	□□□□□ -1.62
TARDBP-219	ENST00000617757	ZNF861P	O60384	105 aa		4.93	□□□□□ -1.62
TARDBP-219	ENST00000617757	INAFM2	P0DMQ5	153 aa		4.93	□□□□□ -1.62
TARDBP-219	ENST00000617757	RPL37A	P61513	92 aa	Known RBP	4.93	□□□□□ -1.62
TARDBP-219	ENST00000617757	DHRS4-AS1	Q9P1J3	65 aa		4.93	□□□□□ -1.62
TARDBP-219	ENST00000617757	TRBV20-1	A0A075B6N2	111 aa		4.92	□□□□□ -1.62
TARDBP-219	ENST00000617757		A0A1B0GX51	115 aa		4.92	□□□□□ -1.62
TARDBP-219	ENST00000617757	hADV29S1	A0JD25	119 aa		4.92	□□□□□ -1.62
TARDBP-219	ENST00000617757	SLC25A20	O43772	301 aa		4.92	□□□□□ -1.62
TARDBP-219	ENST00000617757	KRTAP10-4	P60372	401 aa	Predicted RBP	4.92	□□□□□ -1.62
TARDBP-219	ENST00000617757	KIAA1109	Q2LD37	5005 aa		4.91	□□□□□ -1.62
TARDBP-219	ENST00000617757		A0A1B0GV90	55 aa		4.91	□□□□□ -1.62
TARDBP-219	ENST00000617757	ERC2-IT1	O76042	136 aa		4.91	□□□□□ -1.62
TARDBP-219	ENST00000617757	ATXN8	Q156A1	80 aa		4.91	□□□□□ -1.62
TARDBP-219	ENST00000617757	HIGD2A	Q9BW72	106 aa		4.91	□□□□□ -1.62
TARDBP-219	ENST00000617757	KRTAP17-1	Q9BYP8	105 aa		4.91	□□□□□ -1.62
TARDBP-219	ENST00000617757	SPCS1	Q9Y6A9	102 aa		4.91	□□□□□ -1.62
TARDBP-219	ENST00000617757		K7EP34	96 aa		4.9	□□□□□ -1.63
TARDBP-219	ENST00000617757	SNCG	O76070	127 aa		4.9	□□□□□ -1.63
TARDBP-219	ENST00000617757	TRAC	P01848	142 aa		4.9	□□□□□ -1.63
TARDBP-219	ENST00000617757		H3BMG7	143 aa		4.89	□□□□□ -1.63
TARDBP-219	ENST00000617757	PLA2G1B	P04054	148 aa	Known RBP	4.89	□□□□□ -1.63
TARDBP-219	ENST00000617757		Q6ZQY7	126 aa		4.89	□□□□□ -1.63
TARDBP-219	ENST00000617757	DNAL4	O96015	105 aa		4.88	□□□□□ -1.63
TARDBP-219	ENST00000617757		Q5VSD8	79 aa		4.88	□□□□□ -1.63
TARDBP-219	ENST00000617757	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.88	□□□□□ -1.63
TARDBP-219	ENST00000617757	GTF2H5	Q6ZYL4	71 aa		4.88	□□□□□ -1.63
TARDBP-219	ENST00000617757		Q8N1X5	172 aa		4.88	□□□□□ -1.63
TARDBP-219	ENST00000617757	ST20-AS1	Q8NBB2	130 aa		4.88	□□□□□ -1.63
TARDBP-219	ENST00000617757	SRRM2	Q9UQ35	2752 aa	Known RBP	4.87	□□□□□ -1.63
TARDBP-219	ENST00000617757	LINC01547	P58512	204 aa	Predicted RBP	4.87	□□□□□ -1.63
TARDBP-219	ENST00000617757	OCIAD2	Q56VL3	154 aa		4.87	□□□□□ -1.63
TARDBP-219	ENST00000617757	SPINK6	Q6UWN8	80 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms