RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TRAV7A0A075B6U4 112 aa2.17□□□□□ -2.06
LPP-220ENST00000617246 IGFL1Q6UW32 110 aa2.17□□□□□ -2.06
LPP-220ENST00000617246 DSCR10P59022 87 aa2.17□□□□□ -2.06
LPP-220ENST00000617246 MRPS12O15235 138 aaKnown RBP2.17□□□□□ -2.06
LPP-220ENST00000617246 A0A0A0MQY5 61 aa2.17□□□□□ -2.06
LPP-220ENST00000617246 TRBV7-4A0A0J9YYF1 115 aa2.17□□□□□ -2.06
LPP-220ENST00000617246 TRBV7-7A0A0K0K1E9 115 aa2.17□□□□□ -2.06
LPP-220ENST00000617246 LINC01546A6NGU7 62 aa2.17□□□□□ -2.06
LPP-220ENST00000617246 PCOTHQ58A44 107 aa2.17□□□□□ -2.06
LPP-220ENST00000617246 RPS29P62273 56 aaKnown RBP2.16□□□□□ -2.06
LPP-220ENST00000617246 NOTCH2Q04721 2471 aa2.16□□□□□ -2.06
LPP-220ENST00000617246 A8MWP4 228 aa2.16□□□□□ -2.06
LPP-220ENST00000617246 PRM2P04554 102 aa2.16□□□□□ -2.06
LPP-220ENST00000617246 LINC00643Q86TS7 51 aa2.16□□□□□ -2.06
LPP-220ENST00000617246 BAHCC1Q9P281 2608 aa2.16□□□□□ -2.06
LPP-220ENST00000617246 FAM218AQ96MZ4 157 aa2.16□□□□□ -2.06
LPP-220ENST00000617246 A0A1B0GVX0 72 aa2.15□□□□□ -2.06
LPP-220ENST00000617246 USP9YO00507 2555 aaPredicted RBP2.15□□□□□ -2.06
LPP-220ENST00000617246 AMELXQ99217 191 aa2.15□□□□□ -2.06
LPP-220ENST00000617246 TLN2Q9Y4G6 2542 aa2.15□□□□□ -2.06
LPP-220ENST00000617246 PRR26Q8N8Z3 221 aa2.15□□□□□ -2.06
LPP-220ENST00000617246 LCA10Q71F78 164 aa2.14□□□□□ -2.07
LPP-220ENST00000617246 PRR34Q9NV39 138 aa2.14□□□□□ -2.07
LPP-220ENST00000617246 SMCPP49901 116 aaPredicted RBP2.14□□□□□ -2.07
LPP-220ENST00000617246 EPG5Q9HCE0 2579 aa2.14□□□□□ -2.07
LPP-220ENST00000617246 IGLV5-45A0A087WSX0 123 aa2.14□□□□□ -2.07
LPP-220ENST00000617246 C15orf56Q8N910 161 aa2.14□□□□□ -2.07
LPP-220ENST00000617246 IGF2RP11717 2491 aa2.13□□□□□ -2.07
LPP-220ENST00000617246 DEFB116Q30KQ4 102 aa2.13□□□□□ -2.07
LPP-220ENST00000617246 CDC42SE1Q9NRR8 79 aa2.13□□□□□ -2.07
LPP-220ENST00000617246 PRRC2CQ9Y520 2896 aaKnown RBP2.13□□□□□ -2.07
LPP-220ENST00000617246 COX8CQ7Z4L0 72 aa2.13□□□□□ -2.07
LPP-220ENST00000617246 PRO2289Q9P1D8 64 aa2.13□□□□□ -2.07
LPP-220ENST00000617246 ANKRD11Q6UB99 2663 aaPredicted RBP2.13□□□□□ -2.07
LPP-220ENST00000617246 JMJD1CQ15652 2540 aa2.12□□□□□ -2.07
LPP-220ENST00000617246 USP9XQ93008 2570 aaPredicted RBP2.12□□□□□ -2.07
LPP-220ENST00000617246 C9orf129Q5T035 196 aaKnown RBP2.12□□□□□ -2.07
LPP-220ENST00000617246 Q5XG85 94 aa2.12□□□□□ -2.07
LPP-220ENST00000617246 Q6ZQT0 140 aa2.12□□□□□ -2.07
LPP-220ENST00000617246 KCNQ1DNQ9H478 68 aa2.12□□□□□ -2.07
LPP-220ENST00000617246 H7BZZ5 65 aa2.12□□□□□ -2.07
LPP-220ENST00000617246 C1orf64Q8NEQ6 169 aa2.11□□□□□ -2.07
LPP-220ENST00000617246 PSPHP1O15172 72 aa2.11□□□□□ -2.07
LPP-220ENST00000617246 A8MTW9 85 aa2.11□□□□□ -2.07
LPP-220ENST00000617246 FXYD2P54710 66 aa2.11□□□□□ -2.07
LPP-220ENST00000617246 KLK9Q2XQG4 91 aa2.11□□□□□ -2.07
LPP-220ENST00000617246 CENPFP49454 3210 aa2.11□□□□□ -2.07
LPP-220ENST00000617246 SMIM29Q86T20 159 aa2.1□□□□□ -2.07
LPP-220ENST00000617246 LINC01600Q96MT4 127 aa2.1□□□□□ -2.07
LPP-220ENST00000617246 PIEZO2Q9H5I5 2752 aa2.1□□□□□ -2.07
LPP-220ENST00000617246 UQCR11O14957 56 aa2.1□□□□□ -2.07
LPP-220ENST00000617246 PANO1I0J062 215 aa2.1□□□□□ -2.07
LPP-220ENST00000617246 ZCCHC13Q8WW36 166 aaKnown RBP2.09□□□□□ -2.07
LPP-220ENST00000617246 IGIPA6NJ69 53 aa2.09□□□□□ -2.08
LPP-220ENST00000617246 MTORP42345 2549 aa2.09□□□□□ -2.08
LPP-220ENST00000617246 FAM168BA1KXE4 195 aa2.09□□□□□ -2.08
LPP-220ENST00000617246 Q8N3U1 123 aa2.08□□□□□ -2.08
LPP-220ENST00000617246 C20orf166-AS1Q96NR2 134 aa2.08□□□□□ -2.08
LPP-220ENST00000617246 TTTY13Q9BZ97 58 aa2.08□□□□□ -2.08
LPP-220ENST00000617246 IGLV5-48A0A075B6I7 105 aa2.08□□□□□ -2.08
LPP-220ENST00000617246 C11orf21Q9P2W6 132 aa2.08□□□□□ -2.08
LPP-220ENST00000617246 CRIP1P50238 77 aa2.08□□□□□ -2.08
LPP-220ENST00000617246 COX7CP15954 63 aa2.07□□□□□ -2.08
LPP-220ENST00000617246 Q6ZR54 194 aa2.07□□□□□ -2.08
LPP-220ENST00000617246 FAM104AQ969W3 186 aa2.06□□□□□ -2.08
LPP-220ENST00000617246 URB1-AS1Q96HZ7 61 aa2.06□□□□□ -2.08
LPP-220ENST00000617246 NDUFAF8A1L188 74 aa2.06□□□□□ -2.08
LPP-220ENST00000617246 KRTAP29-1A8MX34 341 aaPredicted RBP2.06□□□□□ -2.08
LPP-220ENST00000617246 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.06□□□□□ -2.08
LPP-220ENST00000617246 GOLGB1Q14789 3259 aaKnown RBP2.06□□□□□ -2.08
LPP-220ENST00000617246 ABCA12Q86UK0 2595 aa2.06□□□□□ -2.08
LPP-220ENST00000617246 CHD8Q9HCK8 2581 aa2.06□□□□□ -2.08
LPP-220ENST00000617246 GAS8-AS1O95177 125 aa2.06□□□□□ -2.08
LPP-220ENST00000617246 A0A1W2PNM2 257 aa2.05□□□□□ -2.08
LPP-220ENST00000617246 KRTAP10-2P60368 255 aa2.05□□□□□ -2.08
LPP-220ENST00000617246 TPRXLQ17RH7 258 aa2.05□□□□□ -2.08
LPP-220ENST00000617246 KRTAP10-1P60331 282 aa2.05□□□□□ -2.08
LPP-220ENST00000617246 LOC110117498A0A087WWA1 95 aa2.04□□□□□ -2.08
LPP-220ENST00000617246 M0QZ58 72 aa2.04□□□□□ -2.08
LPP-220ENST00000617246 PCNTO95613 3336 aa2.03□□□□□ -2.08
LPP-220ENST00000617246 A0A087WVE0 104 aa2.03□□□□□ -2.08
LPP-220ENST00000617246 USP24Q9UPU5 2620 aa2.03□□□□□ -2.08
LPP-220ENST00000617246 Q6ZRN7 208 aaPredicted RBP2.03□□□□□ -2.08
LPP-220ENST00000617246 A0A1W2PNN7 141 aa2.03□□□□□ -2.08
LPP-220ENST00000617246 ADAMTSL4-AS1Q5T5F5 129 aa2.03□□□□□ -2.08
LPP-220ENST00000617246 FREM2Q5SZK8 3169 aa2.03□□□□□ -2.09
LPP-220ENST00000617246 RPL37P61927 97 aaKnown RBP2.02□□□□□ -2.09
LPP-220ENST00000617246 P0C880 135 aa2.02□□□□□ -2.09
LPP-220ENST00000617246 Q5W150 140 aa2.02□□□□□ -2.09
LPP-220ENST00000617246 FASNP49327 2511 aaKnown RBP2.02□□□□□ -2.09
LPP-220ENST00000617246 USP34Q70CQ2 3546 aa2.02□□□□□ -2.09
LPP-220ENST00000617246 CEP295Q9C0D2 2601 aa2.02□□□□□ -2.09
LPP-220ENST00000617246 CYSTM1Q9H1C7 97 aa2.01□□□□□ -2.09
LPP-220ENST00000617246 HELZ2Q9BYK8 2649 aaKnown RBP2.01□□□□□ -2.09
LPP-220ENST00000617246 SPRR1BP22528 89 aa2.01□□□□□ -2.09
LPP-220ENST00000617246 DMAC1Q96GE9 116 aa2.01□□□□□ -2.09
LPP-220ENST00000617246 TNRC18O15417 2968 aaPredicted RBP2.01□□□□□ -2.09
LPP-220ENST00000617246 ITPR2Q14571 2701 aa2.01□□□□□ -2.09
LPP-220ENST00000617246 Q75L30 129 aa2.01□□□□□ -2.09
LPP-220ENST00000617246 FLNAP21333 2647 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms