RNA–Protein interactions for RNA: ENST00000615951.4

CDK11B-206, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,227 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-206ENST00000615951 CXCL6P80162 114 aa12.59□□□□□ -0.39
CDK11B-206ENST00000615951 HAMPP81172 84 aa12.59□□□□□ -0.39
CDK11B-206ENST00000615951 STAB1Q9NY15 2570 aa12.58□□□□□ -0.4
CDK11B-206ENST00000615951 NREPQ16612 68 aa12.57□□□□□ -0.4
CDK11B-206ENST00000615951 C6orf223Q8N319 242 aa12.57□□□□□ -0.4
CDK11B-206ENST00000615951 DNHD1Q96M86 4753 aa12.57□□□□□ -0.4
CDK11B-206ENST00000615951 FUSP35637 526 aaKnown RBP eCLIP12.56□□□□□ -0.4
CDK11B-206ENST00000615951 Q6ZVQ6 151 aa12.56□□□□□ -0.4
CDK11B-206ENST00000615951 GVQW2A0A096LPI5 108 aaPredicted RBP12.56□□□□□ -0.4
CDK11B-206ENST00000615951 Q6ZQT0 140 aa12.56□□□□□ -0.4
CDK11B-206ENST00000615951 MRPL55Q7Z7F7 128 aaKnown RBP12.56□□□□□ -0.4
CDK11B-206ENST00000615951 Q8N814 137 aa12.56□□□□□ -0.4
CDK11B-206ENST00000615951 K7EIL1 84 aa12.55□□□□□ -0.4
CDK11B-206ENST00000615951 Q1T7F1 81 aa12.55□□□□□ -0.4
CDK11B-206ENST00000615951 LINC01556Q5JQF7 62 aa12.55□□□□□ -0.4
CDK11B-206ENST00000615951 KRTAP26-1Q6PEX3 210 aa12.54□□□□□ -0.4
CDK11B-206ENST00000615951 PRYO14603 147 aa12.53□□□□□ -0.4
CDK11B-206ENST00000615951 UNQ6190/PRO20217Q6UXQ8 127 aa12.53□□□□□ -0.4
CDK11B-206ENST00000615951 LOC110117498A0A087WWA1 95 aa12.52□□□□□ -0.41
CDK11B-206ENST00000615951 C10orf25Q5T742 122 aa12.52□□□□□ -0.41
CDK11B-206ENST00000615951 PKD1L1Q8TDX9 2849 aa12.51□□□□□ -0.41
CDK11B-206ENST00000615951 C9orf116Q5BN46 136 aaPredicted RBP12.51□□□□□ -0.41
CDK11B-206ENST00000615951 COL6A5A8TX70 2615 aa12.49□□□□□ -0.41
CDK11B-206ENST00000615951 PRB2P02812 416 aaPredicted RBP12.49□□□□□ -0.41
CDK11B-206ENST00000615951 DNAH10OSP0CZ25 163 aa12.49□□□□□ -0.41
CDK11B-206ENST00000615951 MDFIQ99750 246 aa12.49□□□□□ -0.41
CDK11B-206ENST00000615951 Q6ZRP5 223 aa12.48□□□□□ -0.41
CDK11B-206ENST00000615951 hDV103S1A0JD37 113 aa12.47□□□□□ -0.41
CDK11B-206ENST00000615951 BPY2O14599 106 aa12.47□□□□□ -0.41
CDK11B-206ENST00000615951 M0R2N4 97 aa12.45□□□□□ -0.42
CDK11B-206ENST00000615951 C6orf48Q9UBA6 75 aa12.45□□□□□ -0.42
CDK11B-206ENST00000615951 RBM12B-AS1Q9P1G2 102 aa12.43□□□□□ -0.42
CDK11B-206ENST00000615951 C4orf48Q5BLP8 95 aa12.43□□□□□ -0.42
CDK11B-206ENST00000615951 C15orf56Q8N910 161 aa12.43□□□□□ -0.42
CDK11B-206ENST00000615951 TENM3Q9P273 2699 aa12.43□□□□□ -0.42
CDK11B-206ENST00000615951 PRR3P79522 188 aaKnown RBP12.42□□□□□ -0.42
CDK11B-206ENST00000615951 ANK2Q01484 3957 aa12.41□□□□□ -0.42
CDK11B-206ENST00000615951 Q8NDZ9 215 aa12.41□□□□□ -0.42
CDK11B-206ENST00000615951 CAMK2N2Q96S95 79 aa12.41□□□□□ -0.42
CDK11B-206ENST00000615951 KTN1-AS1Q86SY8 53 aa12.4□□□□□ -0.42
CDK11B-206ENST00000615951 LINC00588Q9Y4M8 146 aa12.4□□□□□ -0.42
CDK11B-206ENST00000615951 PDE6GP18545 87 aa12.39□□□□□ -0.43
CDK11B-206ENST00000615951 HIGD2BQ4VC39 106 aa12.39□□□□□ -0.43
CDK11B-206ENST00000615951 IGKV2D-24A0A075B6R9 120 aa12.38□□□□□ -0.43
CDK11B-206ENST00000615951 PSPHP1O15172 72 aa12.38□□□□□ -0.43
CDK11B-206ENST00000615951 OCR1Q9BZK8 76 aa12.38□□□□□ -0.43
CDK11B-206ENST00000615951 TRAV22A0A0B4J277 110 aa12.37□□□□□ -0.43
CDK11B-206ENST00000615951 LRCOL1A6NCL2 159 aa12.37□□□□□ -0.43
CDK11B-206ENST00000615951 SCXQ7RTU7 201 aa12.37□□□□□ -0.43
CDK11B-206ENST00000615951 IGLV6-57P01721 117 aa12.36□□□□□ -0.43
CDK11B-206ENST00000615951 HIGD2AQ9BW72 106 aa12.35□□□□□ -0.43
CDK11B-206ENST00000615951 C1orf64Q8NEQ6 169 aa12.34□□□□□ -0.43
CDK11B-206ENST00000615951 NOTCH1P46531 2555 aa12.31□□□□□ -0.44
CDK11B-206ENST00000615951 UBE2BP63146 152 aa12.31□□□□□ -0.44
CDK11B-206ENST00000615951 SYCNQ0VAF6 134 aa12.31□□□□□ -0.44
CDK11B-206ENST00000615951 C6orf99Q4VX62 202 aa12.31□□□□□ -0.44
CDK11B-206ENST00000615951 LINC00575Q6W349 94 aa12.31□□□□□ -0.44
CDK11B-206ENST00000615951 XAGE1AQ9HD64 81 aa12.3□□□□□ -0.44
CDK11B-206ENST00000615951 HUWE1Q7Z6Z7 4374 aaKnown RBP12.3□□□□□ -0.44
CDK11B-206ENST00000615951 M0R378 163 aa12.29□□□□□ -0.44
CDK11B-206ENST00000615951 VPREB1P12018 145 aa12.29□□□□□ -0.44
CDK11B-206ENST00000615951 B9D2Q9BPU9 175 aa12.27□□□□□ -0.44
CDK11B-206ENST00000615951 NBEAL1Q6ZS30 2694 aa12.26□□□□□ -0.45
CDK11B-206ENST00000615951 A8MU10 97 aa12.26□□□□□ -0.45
CDK11B-206ENST00000615951 H3BQ85 93 aa12.25□□□□□ -0.45
CDK11B-206ENST00000615951 IGKV4-1P06312 121 aa12.25□□□□□ -0.45
CDK11B-206ENST00000615951 TLX1NBP0CAT3 122 aa12.25□□□□□ -0.45
CDK11B-206ENST00000615951 A8MUN3 132 aa12.24□□□□□ -0.45
CDK11B-206ENST00000615951 NDUFS5O43920 106 aa12.23□□□□□ -0.45
CDK11B-206ENST00000615951 DIRC1Q969H9 104 aa12.23□□□□□ -0.45
CDK11B-206ENST00000615951 PSCAO43653 123 aa12.21□□□□□ -0.46
CDK11B-206ENST00000615951 Q8N9L7 120 aa12.2□□□□□ -0.46
CDK11B-206ENST00000615951 ZNF73O43830 326 aaPredicted RBP12.19□□□□□ -0.46
CDK11B-206ENST00000615951 Q5VV11 94 aa12.19□□□□□ -0.46
CDK11B-206ENST00000615951 PLA2G2DQ9UNK4 145 aa12.19□□□□□ -0.46
CDK11B-206ENST00000615951 LCE6AA0A183 80 aa12.19□□□□□ -0.46
CDK11B-206ENST00000615951 UBE2AP49459 152 aa12.18□□□□□ -0.46
CDK11B-206ENST00000615951 CASC10Q5T4H9 136 aa12.18□□□□□ -0.46
CDK11B-206ENST00000615951 APLNQ9ULZ1 77 aa12.18□□□□□ -0.46
CDK11B-206ENST00000615951 PHF5AQ7RTV0 110 aaKnown RBP12.18□□□□□ -0.46
CDK11B-206ENST00000615951 CYP4F30PQ9H0H9 118 aa12.18□□□□□ -0.46
CDK11B-206ENST00000615951 COX7BP24311 80 aa12.17□□□□□ -0.46
CDK11B-206ENST00000615951 C16orf90A8MZG2 172 aa12.17□□□□□ -0.46
CDK11B-206ENST00000615951 FBN3Q75N90 2809 aa12.16□□□□□ -0.46
CDK11B-206ENST00000615951 ELOF1P60002 83 aaKnown RBP12.16□□□□□ -0.46
CDK11B-206ENST00000615951 Q6ZQY7 126 aa12.16□□□□□ -0.46
CDK11B-206ENST00000615951 MGAM2Q2M2H8 2515 aa12.15□□□□□ -0.46
CDK11B-206ENST00000615951 ATP11AUNQ6ZP68 121 aa12.14□□□□□ -0.47
CDK11B-206ENST00000615951 ZCCHC13Q8WW36 166 aaKnown RBP12.14□□□□□ -0.47
CDK11B-206ENST00000615951 IGLV5-37A0A075B6J1 123 aa12.13□□□□□ -0.47
CDK11B-206ENST00000615951 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.13□□□□□ -0.47
CDK11B-206ENST00000615951 DNAH1Q9P2D7 4330 aa12.12□□□□□ -0.47
CDK11B-206ENST00000615951 NKAPP1Q8N9T2 125 aa12.12□□□□□ -0.47
CDK11B-206ENST00000615951 UBE2DNLQ8IWF7 75 aa12.11□□□□□ -0.47
CDK11B-206ENST00000615951 DNAH9Q9NYC9 4486 aa12.11□□□□□ -0.47
CDK11B-206ENST00000615951 FAM30AQ9NZY2 134 aa12.11□□□□□ -0.47
CDK11B-206ENST00000615951 SPTSSBQ8NFR3 76 aa12.1□□□□□ -0.47
CDK11B-206ENST00000615951 KCNQ1DNQ9H478 68 aa12.1□□□□□ -0.47
CDK11B-206ENST00000615951 A6NN06 94 aa12.1□□□□□ -0.47
CDK11B-206ENST00000615951 CHKB-CPT1BH3BT56 60 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms