RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 PRR34Q9NV39 138 aa8.73□□□□□ -1.01
NLRC3-204ENST00000615877 MYO9AB2RTY4 2548 aa8.73□□□□□ -1.01
NLRC3-204ENST00000615877 CRIPTQ9P021 101 aa8.73□□□□□ -1.01
NLRC3-204ENST00000615877 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
NLRC3-204ENST00000615877 KRTAP10-3P60369 221 aa8.72□□□□□ -1.01
NLRC3-204ENST00000615877 NCOR2Q9Y618 2525 aa8.71□□□□□ -1.01
NLRC3-204ENST00000615877 A0A087WTM6 91 aa8.71□□□□□ -1.01
NLRC3-204ENST00000615877 LCA10Q71F78 164 aa8.71□□□□□ -1.01
NLRC3-204ENST00000615877 ZNF861PO60384 105 aa8.7□□□□□ -1.02
NLRC3-204ENST00000615877 PLA2G2DQ9UNK4 145 aa8.68□□□□□ -1.02
NLRC3-204ENST00000615877 SPANXA2-OT1Q8N9U9 137 aa8.66□□□□□ -1.02
NLRC3-204ENST00000615877 TLX1NBP0CAT3 122 aa8.65□□□□□ -1.02
NLRC3-204ENST00000615877 ZNF575Q86XF7 245 aa8.65□□□□□ -1.02
NLRC3-204ENST00000615877 Q8N1X5 172 aa8.65□□□□□ -1.02
NLRC3-204ENST00000615877 M0R2T5 61 aa8.65□□□□□ -1.02
NLRC3-204ENST00000615877 FN1P02751 2386 aaKnown RBP8.65□□□□□ -1.02
NLRC3-204ENST00000615877 GIG44P09565 113 aaPredicted RBP8.65□□□□□ -1.03
NLRC3-204ENST00000615877 CDC42SE1Q9NRR8 79 aa8.64□□□□□ -1.03
NLRC3-204ENST00000615877 TLN1Q9Y490 2541 aaKnown RBP8.64□□□□□ -1.03
NLRC3-204ENST00000615877 A0A1W2PNM2 257 aa8.64□□□□□ -1.03
NLRC3-204ENST00000615877 WDR87Q6ZQQ6 2873 aa8.64□□□□□ -1.03
NLRC3-204ENST00000615877 IGLV7-43P04211 117 aa8.63□□□□□ -1.03
NLRC3-204ENST00000615877 LINC00612Q8N6U2 182 aa8.63□□□□□ -1.03
NLRC3-204ENST00000615877 CASC10Q5T4H9 136 aa8.63□□□□□ -1.03
NLRC3-204ENST00000615877 PSORS1C2Q9UIG4 136 aa8.61□□□□□ -1.03
NLRC3-204ENST00000615877 C19orf73Q9NVV2 129 aa8.61□□□□□ -1.03
NLRC3-204ENST00000615877 IGLV5-48A0A075B6I7 105 aa8.6□□□□□ -1.03
NLRC3-204ENST00000615877 JMJD1CQ15652 2540 aa8.6□□□□□ -1.03
NLRC3-204ENST00000615877 Q1T7F1 81 aa8.59□□□□□ -1.03
NLRC3-204ENST00000615877 WIPF1O43516 503 aa8.56□□□□□ -1.04
NLRC3-204ENST00000615877 OCR1Q9BZK8 76 aa8.56□□□□□ -1.04
NLRC3-204ENST00000615877 ABCA12Q86UK0 2595 aa8.56□□□□□ -1.04
NLRC3-204ENST00000615877 FAM104AQ969W3 186 aa8.56□□□□□ -1.04
NLRC3-204ENST00000615877 Q6ZSA8 131 aa8.55□□□□□ -1.04
NLRC3-204ENST00000615877 SPRR4Q96PI1 79 aa8.53□□□□□ -1.04
NLRC3-204ENST00000615877 C9orf163Q8N9P6 203 aa8.52□□□□□ -1.04
NLRC3-204ENST00000615877 ZFYVE26Q68DK2 2539 aa8.52□□□□□ -1.04
NLRC3-204ENST00000615877 USP9XQ93008 2570 aaPredicted RBP8.5□□□□□ -1.05
NLRC3-204ENST00000615877 TNP2Q05952 138 aa8.49□□□□□ -1.05
NLRC3-204ENST00000615877 A0A096LNT2 108 aa8.49□□□□□ -1.05
NLRC3-204ENST00000615877 CNBPP62633 177 aaKnown RBP8.47□□□□□ -1.05
NLRC3-204ENST00000615877 IGLV7-46A0A075B6I9 117 aa8.47□□□□□ -1.05
NLRC3-204ENST00000615877 Q5XG85 94 aa8.46□□□□□ -1.05
NLRC3-204ENST00000615877 TLN2Q9Y4G6 2542 aa8.46□□□□□ -1.06
NLRC3-204ENST00000615877 PRR26Q8N8Z3 221 aa8.46□□□□□ -1.06
NLRC3-204ENST00000615877 CAMK2N1Q7Z7J9 78 aa8.45□□□□□ -1.06
NLRC3-204ENST00000615877 Q75L30 129 aa8.44□□□□□ -1.06
NLRC3-204ENST00000615877 FAM229BQ4G0N7 80 aa8.44□□□□□ -1.06
NLRC3-204ENST00000615877 SETD2Q9BYW2 2564 aaPredicted RBP8.39□□□□□ -1.07
NLRC3-204ENST00000615877 PKD1L2Q7Z442 2459 aa8.39□□□□□ -1.07
NLRC3-204ENST00000615877 PIEZO1Q92508 2521 aa8.39□□□□□ -1.07
NLRC3-204ENST00000615877 CYSTM1Q9H1C7 97 aa8.39□□□□□ -1.07
NLRC3-204ENST00000615877 FP248Q71RG6 208 aaPredicted RBP8.37□□□□□ -1.07
NLRC3-204ENST00000615877 ANKRD17O75179 2603 aaKnown RBP8.35□□□□□ -1.07
NLRC3-204ENST00000615877 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.35□□□□□ -1.07
NLRC3-204ENST00000615877 CENPFP49454 3210 aa8.35□□□□□ -1.07
NLRC3-204ENST00000615877 HRES1P13985 223 aa8.35□□□□□ -1.07
NLRC3-204ENST00000615877 LUZP6Q538Z0 58 aa8.35□□□□□ -1.07
NLRC3-204ENST00000615877 USP9YO00507 2555 aaPredicted RBP8.35□□□□□ -1.07
NLRC3-204ENST00000615877 LINC01558Q9Y6Z2 57 aa8.35□□□□□ -1.07
NLRC3-204ENST00000615877 ANKRD11Q6UB99 2663 aaPredicted RBP8.34□□□□□ -1.07
NLRC3-204ENST00000615877 Q8N9P0 234 aaPredicted RBP8.34□□□□□ -1.07
NLRC3-204ENST00000615877 KRTAP1-3Q8IUG1 177 aa8.34□□□□□ -1.08
NLRC3-204ENST00000615877 ZNF462Q96JM2 2506 aa8.33□□□□□ -1.08
NLRC3-204ENST00000615877 A0A1B0GU33 70 aa8.32□□□□□ -1.08
NLRC3-204ENST00000615877 LINC00483Q53H64 154 aa8.32□□□□□ -1.08
NLRC3-204ENST00000615877 MMP24-AS1A0A0U1RRL7 71 aa8.29□□□□□ -1.08
NLRC3-204ENST00000615877 PRAC1Q96KF2 57 aa8.28□□□□□ -1.08
NLRC3-204ENST00000615877 S4R3F8 94 aa8.28□□□□□ -1.08
NLRC3-204ENST00000615877 Q5VV11 94 aa8.28□□□□□ -1.08
NLRC3-204ENST00000615877 CEP295Q9C0D2 2601 aa8.27□□□□□ -1.09
NLRC3-204ENST00000615877 KRTAP1-1Q07627 177 aa8.27□□□□□ -1.09
NLRC3-204ENST00000615877 DNAH12Q6ZR08 3092 aa8.27□□□□□ -1.09
NLRC3-204ENST00000615877 Q8NDZ9 215 aa8.27□□□□□ -1.09
NLRC3-204ENST00000615877 CR1P17927 2039 aa8.25□□□□□ -1.09
NLRC3-204ENST00000615877 H3BS24 57 aa8.22□□□□□ -1.09
NLRC3-204ENST00000615877 MTORP42345 2549 aa8.22□□□□□ -1.09
NLRC3-204ENST00000615877 F8P00451 2351 aa8.2□□□□□ -1.1
NLRC3-204ENST00000615877 SPINK7P58062 85 aa8.2□□□□□ -1.1
NLRC3-204ENST00000615877 PCNTO95613 3336 aa8.2□□□□□ -1.1
NLRC3-204ENST00000615877 OXTP01178 125 aa8.2□□□□□ -1.1
NLRC3-204ENST00000615877 POLQO75417 2590 aa8.19□□□□□ -1.1
NLRC3-204ENST00000615877 SPRR1AP35321 89 aa8.19□□□□□ -1.1
NLRC3-204ENST00000615877 Q5VSD8 79 aa8.19□□□□□ -1.1
NLRC3-204ENST00000615877 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
NLRC3-204ENST00000615877 DMAC1Q96GE9 116 aa8.17□□□□□ -1.1
NLRC3-204ENST00000615877 ZCCHC13Q8WW36 166 aaKnown RBP8.16□□□□□ -1.1
NLRC3-204ENST00000615877 Q5W150 140 aa8.15□□□□□ -1.1
NLRC3-204ENST00000615877 LINC00472Q9H8W2 130 aa8.15□□□□□ -1.1
NLRC3-204ENST00000615877 ACANP16112 2415 aa8.15□□□□□ -1.1
NLRC3-204ENST00000615877 CHD8Q9HCK8 2581 aa8.15□□□□□ -1.11
NLRC3-204ENST00000615877 SPTBN4Q9H254 2564 aa8.11□□□□□ -1.11
NLRC3-204ENST00000615877 R4GN34 69 aa8.11□□□□□ -1.11
NLRC3-204ENST00000615877 C5orf42Q9H799 3197 aa8.11□□□□□ -1.11
NLRC3-204ENST00000615877 SPRR1BP22528 89 aa8.1□□□□□ -1.11
NLRC3-204ENST00000615877 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
NLRC3-204ENST00000615877 SEC61BP60468 96 aaKnown RBP8.06□□□□□ -1.12
NLRC3-204ENST00000615877 FASNP49327 2511 aaKnown RBP8.06□□□□□ -1.12
NLRC3-204ENST00000615877 KRTAP26-1Q6PEX3 210 aa8.04□□□□□ -1.12
NLRC3-204ENST00000615877 A0A0A0MQY5 61 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms