RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 PTPN13Q12923 2485 aa5.68□□□□□ -1.5
PDE6A-204ENST00000613228 Q8N9P0 234 aaPredicted RBP5.67□□□□□ -1.5
PDE6A-204ENST00000613228 IGHV6-1A0A0B4J1U7 121 aa5.67□□□□□ -1.5
PDE6A-204ENST00000613228 CIRBP-AS1Q8TBR5 109 aa5.67□□□□□ -1.5
PDE6A-204ENST00000613228 LINC00476Q8WZB0 136 aa5.66□□□□□ -1.5
PDE6A-204ENST00000613228 C9orf163Q8N9P6 203 aa5.66□□□□□ -1.5
PDE6A-204ENST00000613228 ASB16-AS1Q495Z4 193 aa5.66□□□□□ -1.5
PDE6A-204ENST00000613228 WNK1Q9H4A3 2382 aa5.65□□□□□ -1.5
PDE6A-204ENST00000613228 MOBPQ13875 183 aa5.65□□□□□ -1.5
PDE6A-204ENST00000613228 LINC01558Q9Y6Z2 57 aa5.65□□□□□ -1.51
PDE6A-204ENST00000613228 SPINK6Q6UWN8 80 aa5.64□□□□□ -1.51
PDE6A-204ENST00000613228 SORL1Q92673 2214 aa5.64□□□□□ -1.51
PDE6A-204ENST00000613228 A0A087WTM6 91 aa5.64□□□□□ -1.51
PDE6A-204ENST00000613228 CCDC168Q8NDH2 2452 aa5.64□□□□□ -1.51
PDE6A-204ENST00000613228 SPTBN4Q9H254 2564 aa5.63□□□□□ -1.51
PDE6A-204ENST00000613228 ST20-AS1Q8NBB2 130 aa5.63□□□□□ -1.51
PDE6A-204ENST00000613228 FAM168BA1KXE4 195 aa5.63□□□□□ -1.51
PDE6A-204ENST00000613228 PRAC1Q96KF2 57 aa5.63□□□□□ -1.51
PDE6A-204ENST00000613228 A8MWP4 228 aa5.62□□□□□ -1.51
PDE6A-204ENST00000613228 C5orf42Q9H799 3197 aa5.62□□□□□ -1.51
PDE6A-204ENST00000613228 CHD8Q9HCK8 2581 aa5.61□□□□□ -1.51
PDE6A-204ENST00000613228 MYO18BQ8IUG5 2567 aa5.6□□□□□ -1.51
PDE6A-204ENST00000613228 A6NN06 94 aa5.59□□□□□ -1.51
PDE6A-204ENST00000613228 ABCA2Q9BZC7 2435 aa5.59□□□□□ -1.51
PDE6A-204ENST00000613228 NOTCH3Q9UM47 2321 aa5.59□□□□□ -1.51
PDE6A-204ENST00000613228 CHTF8P0CG12 524 aa5.58□□□□□ -1.52
PDE6A-204ENST00000613228 SSBP3-AS1Q7Z2R9 100 aa5.58□□□□□ -1.52
PDE6A-204ENST00000613228 ZNF861PO60384 105 aa5.58□□□□□ -1.52
PDE6A-204ENST00000613228 Q8N377 158 aa5.58□□□□□ -1.52
PDE6A-204ENST00000613228 IGLV7-46A0A075B6I9 117 aa5.57□□□□□ -1.52
PDE6A-204ENST00000613228 ZNF292O60281 2723 aa5.57□□□□□ -1.52
PDE6A-204ENST00000613228 NOTCH2Q04721 2471 aa5.56□□□□□ -1.52
PDE6A-204ENST00000613228 SONP18583 2426 aaKnown RBP5.56□□□□□ -1.52
PDE6A-204ENST00000613228 PLA2G1BP04054 148 aaKnown RBP5.56□□□□□ -1.52
PDE6A-204ENST00000613228 IGFL1Q6UW32 110 aa5.56□□□□□ -1.52
PDE6A-204ENST00000613228 IGLV5-48A0A075B6I7 105 aa5.55□□□□□ -1.52
PDE6A-204ENST00000613228 SPINK1P00995 79 aa5.55□□□□□ -1.52
PDE6A-204ENST00000613228 FAM229AH3BQW9 127 aa5.55□□□□□ -1.52
PDE6A-204ENST00000613228 USP9XQ93008 2570 aaPredicted RBP5.55□□□□□ -1.52
PDE6A-204ENST00000613228 CASC10Q5T4H9 136 aa5.55□□□□□ -1.52
PDE6A-204ENST00000613228 PRR26Q8N8Z3 221 aa5.54□□□□□ -1.52
PDE6A-204ENST00000613228 A0A1W2PNN7 141 aa5.54□□□□□ -1.52
PDE6A-204ENST00000613228 KRTAP26-1Q6PEX3 210 aa5.53□□□□□ -1.52
PDE6A-204ENST00000613228 CSAG1Q6PB30 78 aa5.53□□□□□ -1.52
PDE6A-204ENST00000613228 IGLV7-43P04211 117 aa5.53□□□□□ -1.52
PDE6A-204ENST00000613228 LRRK2Q5S007 2527 aa5.53□□□□□ -1.52
PDE6A-204ENST00000613228 TYMSOSQ8TAI1 123 aa5.52□□□□□ -1.53
PDE6A-204ENST00000613228 SPRR4Q96PI1 79 aa5.52□□□□□ -1.53
PDE6A-204ENST00000613228 SPRR1AP35321 89 aa5.52□□□□□ -1.53
PDE6A-204ENST00000613228 MRPL34Q9BQ48 92 aaKnown RBP5.51□□□□□ -1.53
PDE6A-204ENST00000613228 ABCA12Q86UK0 2595 aa5.51□□□□□ -1.53
PDE6A-204ENST00000613228 IGLV8-61A0A075B6I0 122 aa5.51□□□□□ -1.53
PDE6A-204ENST00000613228 USP9YO00507 2555 aaPredicted RBP5.5□□□□□ -1.53
PDE6A-204ENST00000613228 SPINK7P58062 85 aa5.5□□□□□ -1.53
PDE6A-204ENST00000613228 SPACA4Q8TDM5 124 aa5.5□□□□□ -1.53
PDE6A-204ENST00000613228 A0A1W2PNM2 257 aa5.49□□□□□ -1.53
PDE6A-204ENST00000613228 BRCA2P51587 3418 aa5.49□□□□□ -1.53
PDE6A-204ENST00000613228 DSCR10P59022 87 aa5.48□□□□□ -1.53
PDE6A-204ENST00000613228 PLAC8Q9NZF1 115 aa5.48□□□□□ -1.53
PDE6A-204ENST00000613228 PSORS1C2Q9UIG4 136 aa5.48□□□□□ -1.53
PDE6A-204ENST00000613228 MYO9AB2RTY4 2548 aa5.47□□□□□ -1.53
PDE6A-204ENST00000613228 C8orf17Q9NRJ1 99 aa5.47□□□□□ -1.53
PDE6A-204ENST00000613228 RANBP2P49792 3224 aaKnown RBP5.47□□□□□ -1.53
PDE6A-204ENST00000613228 TNRC18O15417 2968 aaPredicted RBP5.47□□□□□ -1.53
PDE6A-204ENST00000613228 MKI67P46013 3256 aaKnown RBP5.46□□□□□ -1.53
PDE6A-204ENST00000613228 DMAC1Q96GE9 116 aa5.46□□□□□ -1.53
PDE6A-204ENST00000613228 A0A1B0GVX0 72 aa5.46□□□□□ -1.54
PDE6A-204ENST00000613228 SPRR1BP22528 89 aa5.46□□□□□ -1.54
PDE6A-204ENST00000613228 CRIPTQ9P021 101 aa5.45□□□□□ -1.54
PDE6A-204ENST00000613228 A0A087X002 238 aa5.45□□□□□ -1.54
PDE6A-204ENST00000613228 POLQO75417 2590 aa5.45□□□□□ -1.54
PDE6A-204ENST00000613228 IGKV2D-30A0A075B6S6 120 aa5.44□□□□□ -1.54
PDE6A-204ENST00000613228 IGKV2-30P06310 120 aa5.44□□□□□ -1.54
PDE6A-204ENST00000613228 ZCCHC13Q8WW36 166 aaKnown RBP5.44□□□□□ -1.54
PDE6A-204ENST00000613228 TLN2Q9Y4G6 2542 aa5.43□□□□□ -1.54
PDE6A-204ENST00000613228 FASNP49327 2511 aaKnown RBP5.43□□□□□ -1.54
PDE6A-204ENST00000613228 KRTAP21-3Q3LHN1 58 aa5.43□□□□□ -1.54
PDE6A-204ENST00000613228 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
PDE6A-204ENST00000613228 AKAP13Q12802 2813 aa5.42□□□□□ -1.54
PDE6A-204ENST00000613228 Q8NDZ9 215 aa5.42□□□□□ -1.54
PDE6A-204ENST00000613228 PCNTO95613 3336 aa5.41□□□□□ -1.54
PDE6A-204ENST00000613228 KRTAP16-1A8MUX0 517 aa5.4□□□□□ -1.54
PDE6A-204ENST00000613228 HRES1P13985 223 aa5.4□□□□□ -1.54
PDE6A-204ENST00000613228 USP24Q9UPU5 2620 aa5.4□□□□□ -1.55
PDE6A-204ENST00000613228 C2CD3Q4AC94 2353 aa5.4□□□□□ -1.55
PDE6A-204ENST00000613228 LCE6AA0A183 80 aa5.39□□□□□ -1.55
PDE6A-204ENST00000613228 TNP2Q05952 138 aa5.39□□□□□ -1.55
PDE6A-204ENST00000613228 A0A0A0MQY5 61 aa5.39□□□□□ -1.55
PDE6A-204ENST00000613228 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.39□□□□□ -1.55
PDE6A-204ENST00000613228 LAMA3Q16787 3333 aa5.39□□□□□ -1.55
PDE6A-204ENST00000613228 ZFYVE26Q68DK2 2539 aa5.39□□□□□ -1.55
PDE6A-204ENST00000613228 EPG5Q9HCE0 2579 aa5.39□□□□□ -1.55
PDE6A-204ENST00000613228 FN1P02751 2386 aaKnown RBP5.37□□□□□ -1.55
PDE6A-204ENST00000613228 KRTAP1-5Q9BYS1 174 aa5.37□□□□□ -1.55
PDE6A-204ENST00000613228 Q96NJ1 140 aa5.37□□□□□ -1.55
PDE6A-204ENST00000613228 F8P00451 2351 aa5.36□□□□□ -1.55
PDE6A-204ENST00000613228 LINC00483Q53H64 154 aa5.35□□□□□ -1.55
PDE6A-204ENST00000613228 Q6ZR54 194 aa5.35□□□□□ -1.55
PDE6A-204ENST00000613228 ACANP16112 2415 aa5.34□□□□□ -1.55
PDE6A-204ENST00000613228 KRTAP4-16G5E9R7 235 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms