RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 HTN3P15516 51 aa7.33□□□□□ -1.24
PCDHGC3-202ENST00000611950 DEFB135Q30KP9 77 aa7.32□□□□□ -1.24
PCDHGC3-202ENST00000611950 PRKDCP78527 4128 aaKnown RBP7.31□□□□□ -1.24
PCDHGC3-202ENST00000611950 Q6ZTC4 211 aa7.31□□□□□ -1.24
PCDHGC3-202ENST00000611950 LINC00269Q8N2A0 174 aa7.31□□□□□ -1.24
PCDHGC3-202ENST00000611950 LINC00313P59037 77 aa7.31□□□□□ -1.24
PCDHGC3-202ENST00000611950 ENHOQ6UWT2 76 aa7.31□□□□□ -1.24
PCDHGC3-202ENST00000611950 ATP11AUNQ6ZP68 121 aa7.3□□□□□ -1.24
PCDHGC3-202ENST00000611950 TRAV22A0A0B4J277 110 aa7.3□□□□□ -1.24
PCDHGC3-202ENST00000611950 C16orf90A8MZG2 172 aa7.3□□□□□ -1.24
PCDHGC3-202ENST00000611950 NKAPP1Q8N9T2 125 aa7.3□□□□□ -1.24
PCDHGC3-202ENST00000611950 ANGP03950 147 aaKnown RBP7.29□□□□□ -1.24
PCDHGC3-202ENST00000611950 OBSCN-AS1Q96MR7 158 aa7.28□□□□□ -1.24
PCDHGC3-202ENST00000611950 TRBV7-4A0A0J9YYF1 115 aa7.28□□□□□ -1.24
PCDHGC3-202ENST00000611950 hDV103S1A0JD37 113 aa7.28□□□□□ -1.24
PCDHGC3-202ENST00000611950 FAM229AH3BQW9 127 aa7.28□□□□□ -1.24
PCDHGC3-202ENST00000611950 LINC00612Q8N6U2 182 aa7.27□□□□□ -1.25
PCDHGC3-202ENST00000611950 SPTSSBQ8NFR3 76 aa7.27□□□□□ -1.25
PCDHGC3-202ENST00000611950 PRYO14603 147 aa7.26□□□□□ -1.25
PCDHGC3-202ENST00000611950 UBE2AP49459 152 aa7.26□□□□□ -1.25
PCDHGC3-202ENST00000611950 TRAV10A0A0B4J240 114 aa7.26□□□□□ -1.25
PCDHGC3-202ENST00000611950 Q8NDZ9 215 aa7.25□□□□□ -1.25
PCDHGC3-202ENST00000611950 CMYA5Q8N3K9 4069 aa7.25□□□□□ -1.25
PCDHGC3-202ENST00000611950 CHCHD10Q8WYQ3 142 aaPredicted RBP7.25□□□□□ -1.25
PCDHGC3-202ENST00000611950 PRO0255Q9UI72 69 aa7.25□□□□□ -1.25
PCDHGC3-202ENST00000611950 LINC01554Q52M75 96 aa7.24□□□□□ -1.25
PCDHGC3-202ENST00000611950 CELA1Q9UNI1 258 aa7.24□□□□□ -1.25
PCDHGC3-202ENST00000611950 LRCOL1A6NCL2 159 aa7.23□□□□□ -1.25
PCDHGC3-202ENST00000611950 C10orf25Q5T742 122 aa7.23□□□□□ -1.25
PCDHGC3-202ENST00000611950 PRB2P02812 416 aaPredicted RBP7.23□□□□□ -1.25
PCDHGC3-202ENST00000611950 TENM3Q9P273 2699 aa7.23□□□□□ -1.25
PCDHGC3-202ENST00000611950 REG3AQ06141 175 aa7.23□□□□□ -1.25
PCDHGC3-202ENST00000611950 TMEM254Q8TBM7 123 aa7.23□□□□□ -1.25
PCDHGC3-202ENST00000611950 MP68P56378 58 aa7.22□□□□□ -1.25
PCDHGC3-202ENST00000611950 Q5VV11 94 aa7.22□□□□□ -1.25
PCDHGC3-202ENST00000611950 H0YGX0 51 aa7.22□□□□□ -1.25
PCDHGC3-202ENST00000611950 NANOS2P60321 138 aaKnown RBP7.22□□□□□ -1.25
PCDHGC3-202ENST00000611950 C6orf99Q4VX62 202 aa7.22□□□□□ -1.25
PCDHGC3-202ENST00000611950 UNQ6190/PRO20217Q6UXQ8 127 aa7.22□□□□□ -1.25
PCDHGC3-202ENST00000611950 ORMDL1Q9P0S3 153 aa7.22□□□□□ -1.25
PCDHGC3-202ENST00000611950 IGHV4-28A0A0C4DH34 117 aa7.21□□□□□ -1.25
PCDHGC3-202ENST00000611950 HCG22E2RYF7 251 aa7.21□□□□□ -1.25
PCDHGC3-202ENST00000611950 Q8IZM0 81 aa7.21□□□□□ -1.26
PCDHGC3-202ENST00000611950 KLK12Q9UKR0 248 aa7.21□□□□□ -1.26
PCDHGC3-202ENST00000611950 ERC2-IT1O76042 136 aa7.2□□□□□ -1.26
PCDHGC3-202ENST00000611950 KIAA0087Q14695 138 aa7.2□□□□□ -1.26
PCDHGC3-202ENST00000611950 XAGE1AQ9HD64 81 aa7.2□□□□□ -1.26
PCDHGC3-202ENST00000611950 A0A1B0GUV1 79 aa7.19□□□□□ -1.26
PCDHGC3-202ENST00000611950 CXCL6P80162 114 aa7.19□□□□□ -1.26
PCDHGC3-202ENST00000611950 Q8N814 137 aa7.18□□□□□ -1.26
PCDHGC3-202ENST00000611950 SPAG11BQ08648 103 aa7.17□□□□□ -1.26
PCDHGC3-202ENST00000611950 C9orf66Q5T8R8 295 aa7.17□□□□□ -1.26
PCDHGC3-202ENST00000611950 H0Y9J4 135 aa7.17□□□□□ -1.26
PCDHGC3-202ENST00000611950 C1orf64Q8NEQ6 169 aa7.16□□□□□ -1.26
PCDHGC3-202ENST00000611950 M0R2N4 97 aa7.16□□□□□ -1.26
PCDHGC3-202ENST00000611950 HIGD2BQ4VC39 106 aa7.16□□□□□ -1.26
PCDHGC3-202ENST00000611950 CHKB-CPT1BH3BT56 60 aa7.15□□□□□ -1.26
PCDHGC3-202ENST00000611950 UBL5Q9BZL1 73 aa7.15□□□□□ -1.26
PCDHGC3-202ENST00000611950 NREPQ16612 68 aa7.14□□□□□ -1.27
PCDHGC3-202ENST00000611950 Q8NAQ8 132 aa7.14□□□□□ -1.27
PCDHGC3-202ENST00000611950 COL7A1Q02388 2944 aa7.13□□□□□ -1.27
PCDHGC3-202ENST00000611950 PSCAO43653 123 aa7.12□□□□□ -1.27
PCDHGC3-202ENST00000611950 ZNF706Q9Y5V0 76 aaPredicted RBP7.12□□□□□ -1.27
PCDHGC3-202ENST00000611950 KPRPQ5T749 579 aaPredicted RBP7.12□□□□□ -1.27
PCDHGC3-202ENST00000611950 Q6ZQY7 126 aa7.12□□□□□ -1.27
PCDHGC3-202ENST00000611950 KMT2CQ8NEZ4 4911 aaKnown RBP7.11□□□□□ -1.27
PCDHGC3-202ENST00000611950 IGHV4-30-4P0DP06 118 aa7.1□□□□□ -1.27
PCDHGC3-202ENST00000611950 WFDC10BQ8IUB3 73 aa7.1□□□□□ -1.27
PCDHGC3-202ENST00000611950 SCXQ7RTU7 201 aa7.1□□□□□ -1.27
PCDHGC3-202ENST00000611950 HAMPP81172 84 aa7.09□□□□□ -1.27
PCDHGC3-202ENST00000611950 SPART-AS1P0CW21 52 aa7.09□□□□□ -1.27
PCDHGC3-202ENST00000611950 LINC00575Q6W349 94 aa7.09□□□□□ -1.27
PCDHGC3-202ENST00000611950 C6orf48Q9UBA6 75 aa7.09□□□□□ -1.28
PCDHGC3-202ENST00000611950 LINC01547P58512 204 aaPredicted RBP7.08□□□□□ -1.28
PCDHGC3-202ENST00000611950 COX17Q14061 63 aa7.08□□□□□ -1.28
PCDHGC3-202ENST00000611950 CYP4F30PQ9H0H9 118 aa7.08□□□□□ -1.28
PCDHGC3-202ENST00000611950 JMJD7-PLA2G4BH0Y9G9 81 aa7.08□□□□□ -1.28
PCDHGC3-202ENST00000611950 MOBPQ13875 183 aa7.07□□□□□ -1.28
PCDHGC3-202ENST00000611950 LELP1Q5T871 98 aa7.07□□□□□ -1.28
PCDHGC3-202ENST00000611950 PRAC1Q96KF2 57 aa7.06□□□□□ -1.28
PCDHGC3-202ENST00000611950 CDC42SE1Q9NRR8 79 aa7.06□□□□□ -1.28
PCDHGC3-202ENST00000611950 LINC00167Q96N53 147 aa7.06□□□□□ -1.28
PCDHGC3-202ENST00000611950 CAMK2N2Q96S95 79 aa7.05□□□□□ -1.28
PCDHGC3-202ENST00000611950 CSMD3Q7Z407 3707 aa7.05□□□□□ -1.28
PCDHGC3-202ENST00000611950 HIGD2AQ9BW72 106 aa7.04□□□□□ -1.28
PCDHGC3-202ENST00000611950 PRR34Q9NV39 138 aa7.04□□□□□ -1.28
PCDHGC3-202ENST00000611950 K7EIL1 84 aa7.04□□□□□ -1.28
PCDHGC3-202ENST00000611950 Q6ZQT0 140 aa7.04□□□□□ -1.28
PCDHGC3-202ENST00000611950 LIMD2Q9BT23 127 aa7.04□□□□□ -1.28
PCDHGC3-202ENST00000611950 C3orf84H3BNL1 204 aa7.03□□□□□ -1.28
PCDHGC3-202ENST00000611950 BPY2O14599 106 aa7.03□□□□□ -1.28
PCDHGC3-202ENST00000611950 IGLV6-57P01721 117 aa7.03□□□□□ -1.28
PCDHGC3-202ENST00000611950 Q75L30 129 aa7.03□□□□□ -1.28
PCDHGC3-202ENST00000611950 RYR3Q15413 4870 aa7.03□□□□□ -1.28
PCDHGC3-202ENST00000611950 A6NED7 52 aa7.02□□□□□ -1.29
PCDHGC3-202ENST00000611950 WWC2-AS2Q96NR7 200 aa7.02□□□□□ -1.29
PCDHGC3-202ENST00000611950 IGKV2D-24A0A075B6R9 120 aa7.01□□□□□ -1.29
PCDHGC3-202ENST00000611950 A0A0J9YWU9 116 aa7.01□□□□□ -1.29
PCDHGC3-202ENST00000611950 DEFB105AQ8NG35 78 aa7.01□□□□□ -1.29
PCDHGC3-202ENST00000611950 Q8N9L7 120 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms