RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 COX8AP10176 69 aa10.64□□□□□ -0.71
MUC1-224ENST00000611577 CBY1Q9Y3M2 126 aa10.64□□□□□ -0.71
MUC1-224ENST00000611577 MUSTN1Q8IVN3 82 aa10.63□□□□□ -0.71
MUC1-224ENST00000611577 LINC00518Q8N0U6 118 aa10.63□□□□□ -0.71
MUC1-224ENST00000611577 TRAV23DV6A0A075B6W5 121 aa10.61□□□□□ -0.71
MUC1-224ENST00000611577 IGLV6-57P01721 117 aa10.61□□□□□ -0.71
MUC1-224ENST00000611577 C14orf144Q96I85 54 aa10.61□□□□□ -0.71
MUC1-224ENST00000611577 KRTAP13-1Q8IUC0 172 aa10.6□□□□□ -0.71
MUC1-224ENST00000611577 LINC00337Q8N6G1 96 aa10.6□□□□□ -0.71
MUC1-224ENST00000611577 HIGD2AQ9BW72 106 aa10.6□□□□□ -0.71
MUC1-224ENST00000611577 MUC2Q02817 5179 aa10.59□□□□□ -0.71
MUC1-224ENST00000611577 PYY3Q5JQD4 70 aa10.59□□□□□ -0.71
MUC1-224ENST00000611577 PPDPFQ9H3Y8 114 aa10.59□□□□□ -0.71
MUC1-224ENST00000611577 DLEU1O43261 78 aa10.58□□□□□ -0.72
MUC1-224ENST00000611577 SPRR1AP35321 89 aa10.58□□□□□ -0.72
MUC1-224ENST00000611577 HINT1P49773 126 aaPredicted RBP10.58□□□□□ -0.72
MUC1-224ENST00000611577 SLC25A34Q6PIV7 304 aa10.58□□□□□ -0.72
MUC1-224ENST00000611577 HIST1H4GQ99525 98 aa10.58□□□□□ -0.72
MUC1-224ENST00000611577 A6NDN8 102 aa10.56□□□□□ -0.72
MUC1-224ENST00000611577 ZNF73O43830 326 aaPredicted RBP10.56□□□□□ -0.72
MUC1-224ENST00000611577 PRR26Q8N8Z3 221 aa10.56□□□□□ -0.72
MUC1-224ENST00000611577 TRAV13-2A0A0B4J235 113 aa10.53□□□□□ -0.72
MUC1-224ENST00000611577 B5MCH6 92 aa10.53□□□□□ -0.72
MUC1-224ENST00000611577 KRTAP4-16G5E9R7 235 aaPredicted RBP10.53□□□□□ -0.72
MUC1-224ENST00000611577 KRTAP1-4P0C5Y4 121 aa10.53□□□□□ -0.72
MUC1-224ENST00000611577 Q6ZRX8 168 aa10.52□□□□□ -0.73
MUC1-224ENST00000611577 ZNF706Q9Y5V0 76 aaPredicted RBP10.52□□□□□ -0.73
MUC1-224ENST00000611577 A4D1N5 150 aa10.51□□□□□ -0.73
MUC1-224ENST00000611577 RPL13AP40429 203 aaKnown RBP10.51□□□□□ -0.73
MUC1-224ENST00000611577 SMCR5Q8TEV8 140 aa10.51□□□□□ -0.73
MUC1-224ENST00000611577 HIGD1BQ9P298 99 aa10.5□□□□□ -0.73
MUC1-224ENST00000611577 CRYGAP11844 174 aa10.49□□□□□ -0.73
MUC1-224ENST00000611577 C6orf99Q4VX62 202 aa10.48□□□□□ -0.73
MUC1-224ENST00000611577 C12orf57Q99622 126 aa10.47□□□□□ -0.73
MUC1-224ENST00000611577 ANAPC11Q9NYG5 84 aa10.47□□□□□ -0.73
MUC1-224ENST00000611577 COX7BP24311 80 aa10.46□□□□□ -0.73
MUC1-224ENST00000611577 PRR4Q16378 134 aa10.46□□□□□ -0.73
MUC1-224ENST00000611577 FAM229BQ4G0N7 80 aa10.45□□□□□ -0.74
MUC1-224ENST00000611577 C2orf91Q6ZV80 131 aa10.45□□□□□ -0.74
MUC1-224ENST00000611577 SPRR4Q96PI1 79 aa10.45□□□□□ -0.74
MUC1-224ENST00000611577 Q9BRP9 147 aa10.45□□□□□ -0.74
MUC1-224ENST00000611577 TAL2Q16559 108 aa10.44□□□□□ -0.74
MUC1-224ENST00000611577 TYMSOSQ8TAI1 123 aa10.44□□□□□ -0.74
MUC1-224ENST00000611577 A0A087X002 238 aa10.43□□□□□ -0.74
MUC1-224ENST00000611577 DHRS4-AS1Q9P1J3 65 aa10.43□□□□□ -0.74
MUC1-224ENST00000611577 FAT4Q6V0I7 4981 aa10.43□□□□□ -0.74
MUC1-224ENST00000611577 A0A0U1RQV1 116 aa10.42□□□□□ -0.74
MUC1-224ENST00000611577 ERC2-IT1O76042 136 aa10.42□□□□□ -0.74
MUC1-224ENST00000611577 ELOF1P60002 83 aaKnown RBP10.42□□□□□ -0.74
MUC1-224ENST00000611577 GAGE2AQ6NT46 116 aa10.42□□□□□ -0.74
MUC1-224ENST00000611577 SMIM11BQ8TCY0 68 aa10.42□□□□□ -0.74
MUC1-224ENST00000611577 RAB37Q96AX2 223 aa10.42□□□□□ -0.74
MUC1-224ENST00000611577 UQCR10Q9UDW1 63 aa10.42□□□□□ -0.74
MUC1-224ENST00000611577 TMEM238LA0A1B0GVL6 79 aa10.41□□□□□ -0.74
MUC1-224ENST00000611577 A0A1B0GWB2 263 aa10.41□□□□□ -0.74
MUC1-224ENST00000611577 A6NJY4 79 aa10.41□□□□□ -0.74
MUC1-224ENST00000611577 CEND1Q8N111 149 aa10.41□□□□□ -0.74
MUC1-224ENST00000611577 KRTAP9-2Q9BYQ4 174 aa10.41□□□□□ -0.74
MUC1-224ENST00000611577 TRBV7-6A0A0J9YX20 115 aa10.4□□□□□ -0.74
MUC1-224ENST00000611577 VAMP3Q15836 100 aa10.4□□□□□ -0.74
MUC1-224ENST00000611577 H7C2G1 150 aa10.38□□□□□ -0.75
MUC1-224ENST00000611577 SMIM6P0DI80 62 aa10.38□□□□□ -0.75
MUC1-224ENST00000611577 HSD52Q0P140 79 aa10.38□□□□□ -0.75
MUC1-224ENST00000611577 CFC1BP0CG36 223 aa10.36□□□□□ -0.75
MUC1-224ENST00000611577 CFC1P0CG37 223 aa10.36□□□□□ -0.75
MUC1-224ENST00000611577 KRTAP13-2Q52LG2 175 aa10.36□□□□□ -0.75
MUC1-224ENST00000611577 NHP2Q9NX24 153 aaKnown RBP10.36□□□□□ -0.75
MUC1-224ENST00000611577 A0A0B4J2C4 111 aa10.35□□□□□ -0.75
MUC1-224ENST00000611577 SLC25A20O43772 301 aa10.35□□□□□ -0.75
MUC1-224ENST00000611577 ST20-AS1Q8NBB2 130 aa10.35□□□□□ -0.75
MUC1-224ENST00000611577 Q1RN00 199 aa10.34□□□□□ -0.75
MUC1-224ENST00000611577 LINC00483Q53H64 154 aa10.34□□□□□ -0.75
MUC1-224ENST00000611577 C3orf22Q8N5N4 141 aa10.34□□□□□ -0.75
MUC1-224ENST00000611577 PRO1933Q9H354 126 aa10.34□□□□□ -0.75
MUC1-224ENST00000611577 FXYD2P54710 66 aa10.33□□□□□ -0.76
MUC1-224ENST00000611577 IGLV9-49A0A0B4J1Y8 123 aa10.32□□□□□ -0.76
MUC1-224ENST00000611577 BVES-AS1Q5T3Y7 98 aa10.31□□□□□ -0.76
MUC1-224ENST00000611577 LINC00304Q8N9R0 145 aa10.31□□□□□ -0.76
MUC1-224ENST00000611577 DEFB105AQ8NG35 78 aa10.31□□□□□ -0.76
MUC1-224ENST00000611577 LOC105371267A0A1B0GV96 52 aa10.3□□□□□ -0.76
MUC1-224ENST00000611577 TSPAN13O95857 204 aa10.3□□□□□ -0.76
MUC1-224ENST00000611577 PRO1854Q9UHT4 67 aa10.3□□□□□ -0.76
MUC1-224ENST00000611577 C9orf153Q5TBE3 101 aa10.29□□□□□ -0.76
MUC1-224ENST00000611577 MOBPQ13875 183 aa10.28□□□□□ -0.76
MUC1-224ENST00000611577 C4orf48Q5BLP8 95 aa10.27□□□□□ -0.77
MUC1-224ENST00000611577 hADV29S1A0JD25 119 aa10.26□□□□□ -0.77
MUC1-224ENST00000611577 SNCGO76070 127 aa10.26□□□□□ -0.77
MUC1-224ENST00000611577 LINC00575Q6W349 94 aa10.26□□□□□ -0.77
MUC1-224ENST00000611577 Q8NBF4 154 aa10.26□□□□□ -0.77
MUC1-224ENST00000611577 LAMTOR3Q9UHA4 124 aa10.26□□□□□ -0.77
MUC1-224ENST00000611577 MUC17Q685J3 4493 aa10.25□□□□□ -0.77
MUC1-224ENST00000611577 TEX49A0A1B0GTD5 131 aa10.25□□□□□ -0.77
MUC1-224ENST00000611577 LCE2AQ5TA79 106 aaPredicted RBP10.25□□□□□ -0.77
MUC1-224ENST00000611577 TSTD3H0UI37 97 aa10.24□□□□□ -0.77
MUC1-224ENST00000611577 SPRR1BP22528 89 aa10.24□□□□□ -0.77
MUC1-224ENST00000611577 K7ERJ3 54 aa10.23□□□□□ -0.77
MUC1-224ENST00000611577 H0YGX0 51 aa10.22□□□□□ -0.77
MUC1-224ENST00000611577 SPAG11AQ6PDA7 123 aa10.22□□□□□ -0.77
MUC1-224ENST00000611577 SSBP3-AS1Q7Z2R9 100 aa10.22□□□□□ -0.77
MUC1-224ENST00000611577 KRTAP9-6A0A140TA67 174 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms