RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 SERTAD4-AS1Q5TG53 156 aa9.7□□□□□ -0.86
VPS36-207ENST00000611132 A8MUN3 132 aa9.69□□□□□ -0.86
VPS36-207ENST00000611132 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
VPS36-207ENST00000611132 KALRNO60229 2985 aa9.68□□□□□ -0.86
VPS36-207ENST00000611132 FLNAP21333 2647 aaKnown RBP9.67□□□□□ -0.86
VPS36-207ENST00000611132 RPL37AP61513 92 aaKnown RBP9.66□□□□□ -0.86
VPS36-207ENST00000611132 AKAP13Q12802 2813 aa9.66□□□□□ -0.86
VPS36-207ENST00000611132 TRAV22A0A0B4J277 110 aa9.66□□□□□ -0.86
VPS36-207ENST00000611132 C15orf56Q8N910 161 aa9.65□□□□□ -0.86
VPS36-207ENST00000611132 FASNP49327 2511 aaKnown RBP9.65□□□□□ -0.86
VPS36-207ENST00000611132 OCR1Q9BZK8 76 aa9.65□□□□□ -0.86
VPS36-207ENST00000611132 IGLV1-50A0A075B6I6 118 aa9.65□□□□□ -0.87
VPS36-207ENST00000611132 TP53AIP1Q9HCN2 124 aa9.64□□□□□ -0.87
VPS36-207ENST00000611132 FAM168BA1KXE4 195 aa9.64□□□□□ -0.87
VPS36-207ENST00000611132 USP34Q70CQ2 3546 aa9.63□□□□□ -0.87
VPS36-207ENST00000611132 OXTP01178 125 aa9.63□□□□□ -0.87
VPS36-207ENST00000611132 ADGRG4Q8IZF6 3080 aa9.62□□□□□ -0.87
VPS36-207ENST00000611132 A0A1W2PNM2 257 aa9.62□□□□□ -0.87
VPS36-207ENST00000611132 SPAG11AQ6PDA7 123 aa9.61□□□□□ -0.87
VPS36-207ENST00000611132 Q8NDZ9 215 aa9.59□□□□□ -0.87
VPS36-207ENST00000611132 IGLV5-48A0A075B6I7 105 aa9.59□□□□□ -0.87
VPS36-207ENST00000611132 FP248Q71RG6 208 aaPredicted RBP9.59□□□□□ -0.87
VPS36-207ENST00000611132 DNAH10OSP0CZ25 163 aa9.58□□□□□ -0.88
VPS36-207ENST00000611132 IGFL1Q6UW32 110 aa9.58□□□□□ -0.88
VPS36-207ENST00000611132 BOD1L1Q8NFC6 3051 aa9.58□□□□□ -0.88
VPS36-207ENST00000611132 CHD6Q8TD26 2715 aa9.57□□□□□ -0.88
VPS36-207ENST00000611132 A8MWP4 228 aa9.57□□□□□ -0.88
VPS36-207ENST00000611132 EPM2AB3EWF7 344 aa9.57□□□□□ -0.88
VPS36-207ENST00000611132 CYP4F30PQ9H0H9 118 aa9.57□□□□□ -0.88
VPS36-207ENST00000611132 ITPR3Q14573 2671 aa9.57□□□□□ -0.88
VPS36-207ENST00000611132 USP24Q9UPU5 2620 aa9.56□□□□□ -0.88
VPS36-207ENST00000611132 REV3LO60673 3130 aa9.55□□□□□ -0.88
VPS36-207ENST00000611132 MYO15AQ9UKN7 3530 aa9.55□□□□□ -0.88
VPS36-207ENST00000611132 LINC00588Q9Y4M8 146 aa9.55□□□□□ -0.88
VPS36-207ENST00000611132 C16orf90A8MZG2 172 aa9.55□□□□□ -0.88
VPS36-207ENST00000611132 COA5Q86WW8 74 aa9.54□□□□□ -0.88
VPS36-207ENST00000611132 CIRBP-AS1Q8TBR5 109 aa9.54□□□□□ -0.88
VPS36-207ENST00000611132 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
VPS36-207ENST00000611132 PRR15Q8IV56 129 aa9.53□□□□□ -0.88
VPS36-207ENST00000611132 PLA2G2DQ9UNK4 145 aa9.53□□□□□ -0.88
VPS36-207ENST00000611132 TACC2O95359 2948 aa9.53□□□□□ -0.88
VPS36-207ENST00000611132 A0A0G2JQZ4 141 aa9.53□□□□□ -0.88
VPS36-207ENST00000611132 A0A1W2PNN7 141 aa9.53□□□□□ -0.88
VPS36-207ENST00000611132 TLX1NBP0CAT3 122 aa9.52□□□□□ -0.88
VPS36-207ENST00000611132 GCN1Q92616 2671 aaKnown RBP9.52□□□□□ -0.89
VPS36-207ENST00000611132 ATRQ13535 2644 aa9.5□□□□□ -0.89
VPS36-207ENST00000611132 KRTAP10-3P60369 221 aa9.5□□□□□ -0.89
VPS36-207ENST00000611132 COL6A3P12111 3177 aa9.5□□□□□ -0.89
VPS36-207ENST00000611132 CR1P17927 2039 aa9.49□□□□□ -0.89
VPS36-207ENST00000611132 Q1T7F1 81 aa9.49□□□□□ -0.89
VPS36-207ENST00000611132 MOBPQ13875 183 aa9.49□□□□□ -0.89
VPS36-207ENST00000611132 FAM229BQ4G0N7 80 aa9.49□□□□□ -0.89
VPS36-207ENST00000611132 ACYP2P14621 99 aa9.47□□□□□ -0.89
VPS36-207ENST00000611132 RETNLBQ9BQ08 111 aa9.47□□□□□ -0.89
VPS36-207ENST00000611132 LOC101927531A0A1B0GV80 90 aa9.47□□□□□ -0.89
VPS36-207ENST00000611132 DSCR10P59022 87 aa9.47□□□□□ -0.89
VPS36-207ENST00000611132 K7ERS5 55 aa9.46□□□□□ -0.89
VPS36-207ENST00000611132 KRTAP1-3Q8IUG1 177 aa9.46□□□□□ -0.89
VPS36-207ENST00000611132 CD164Q04900 197 aa9.46□□□□□ -0.89
VPS36-207ENST00000611132 CHTF8P0CG12 524 aa9.46□□□□□ -0.9
VPS36-207ENST00000611132 SPANXA2-OT1Q8N9U9 137 aa9.46□□□□□ -0.9
VPS36-207ENST00000611132 EYSQ5T1H1 3165 aa9.45□□□□□ -0.9
VPS36-207ENST00000611132 LRBAP50851 2863 aa9.45□□□□□ -0.9
VPS36-207ENST00000611132 A0A1B0GU69 56 aa9.45□□□□□ -0.9
VPS36-207ENST00000611132 ATP11AUNQ6ZP68 121 aa9.45□□□□□ -0.9
VPS36-207ENST00000611132 SPRR4Q96PI1 79 aa9.45□□□□□ -0.9
VPS36-207ENST00000611132 HECTD1Q9ULT8 2610 aa9.43□□□□□ -0.9
VPS36-207ENST00000611132 SPTBN5Q9NRC6 3674 aaKnown RBP9.42□□□□□ -0.9
VPS36-207ENST00000611132 NUPR2A6NF83 97 aa9.41□□□□□ -0.9
VPS36-207ENST00000611132 IGLV5-37A0A075B6J1 123 aa9.41□□□□□ -0.9
VPS36-207ENST00000611132 NBEAL2Q6ZNJ1 2754 aa9.41□□□□□ -0.9
VPS36-207ENST00000611132 CFAP46Q8IYW2 2715 aa9.4□□□□□ -0.9
VPS36-207ENST00000611132 UNC79Q9P2D8 2635 aa9.4□□□□□ -0.9
VPS36-207ENST00000611132 MRPL34Q9BQ48 92 aaKnown RBP9.4□□□□□ -0.91
VPS36-207ENST00000611132 KTN1-AS1Q86SY8 53 aa9.4□□□□□ -0.91
VPS36-207ENST00000611132 ZZEF1O43149 2961 aa9.38□□□□□ -0.91
VPS36-207ENST00000611132 C8orf17Q9NRJ1 99 aa9.38□□□□□ -0.91
VPS36-207ENST00000611132 ATMQ13315 3056 aa9.38□□□□□ -0.91
VPS36-207ENST00000611132 SPINK1P00995 79 aa9.37□□□□□ -0.91
VPS36-207ENST00000611132 CASC10Q5T4H9 136 aa9.37□□□□□ -0.91
VPS36-207ENST00000611132 IGLV5-52A0A0A0MRZ9 124 aa9.37□□□□□ -0.91
VPS36-207ENST00000611132 KRTAP1-1Q07627 177 aa9.37□□□□□ -0.91
VPS36-207ENST00000611132 CFAP47Q6ZTR5 3102 aa9.36□□□□□ -0.91
VPS36-207ENST00000611132 DMXL2Q8TDJ6 3036 aa9.35□□□□□ -0.91
VPS36-207ENST00000611132 IGKV2D-30A0A075B6S6 120 aa9.35□□□□□ -0.91
VPS36-207ENST00000611132 IGKV2-30P06310 120 aa9.35□□□□□ -0.91
VPS36-207ENST00000611132 TEX15Q9BXT5 2789 aa9.34□□□□□ -0.91
VPS36-207ENST00000611132 KRTAP10-11P60412 298 aa9.33□□□□□ -0.92
VPS36-207ENST00000611132 MGAM2Q2M2H8 2515 aa9.32□□□□□ -0.92
VPS36-207ENST00000611132 A0A1B0GVX0 72 aa9.31□□□□□ -0.92
VPS36-207ENST00000611132 C8orf87E5RJ46 101 aa9.31□□□□□ -0.92
VPS36-207ENST00000611132 C7orf65Q6ZTY9 151 aa9.31□□□□□ -0.92
VPS36-207ENST00000611132 MDFIQ99750 246 aa9.3□□□□□ -0.92
VPS36-207ENST00000611132 CDC42SE1Q9NRR8 79 aa9.3□□□□□ -0.92
VPS36-207ENST00000611132 SPRR1AP35321 89 aa9.29□□□□□ -0.92
VPS36-207ENST00000611132 FLNBO75369 2602 aaKnown RBP9.29□□□□□ -0.92
VPS36-207ENST00000611132 LOC400499M0QZD8 3231 aa9.29□□□□□ -0.92
VPS36-207ENST00000611132 KRTAP24-1Q3LI83 254 aa9.28□□□□□ -0.92
VPS36-207ENST00000611132 NBDYA0A0U1RRE5 68 aa9.28□□□□□ -0.92
VPS36-207ENST00000611132 LY6G6CO95867 125 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms