RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 Q6ZVH6 145 aa5.19□□□□□ -1.58
SNCA-212ENST00000611107 LINC00337Q8N6G1 96 aa5.19□□□□□ -1.58
SNCA-212ENST00000611107 KCNQ1DNQ9H478 68 aa5.19□□□□□ -1.58
SNCA-212ENST00000611107 FAM19A1Q7Z5A9 133 aa5.18□□□□□ -1.58
SNCA-212ENST00000611107 MUSTN1Q8IVN3 82 aa5.18□□□□□ -1.58
SNCA-212ENST00000611107 DIRC1Q969H9 104 aa5.18□□□□□ -1.58
SNCA-212ENST00000611107 TRAV23DV6A0A075B6W5 121 aa5.17□□□□□ -1.58
SNCA-212ENST00000611107 RPL28P46779 137 aaKnown RBP5.17□□□□□ -1.58
SNCA-212ENST00000611107 UBE2AP49459 152 aa5.17□□□□□ -1.58
SNCA-212ENST00000611107 S100A7L2Q5SY68 101 aa5.17□□□□□ -1.58
SNCA-212ENST00000611107 SLC25A34Q6PIV7 304 aa5.17□□□□□ -1.58
SNCA-212ENST00000611107 COPS9Q8WXC6 57 aa5.17□□□□□ -1.58
SNCA-212ENST00000611107 ANAPC11Q9NYG5 84 aa5.16□□□□□ -1.58
SNCA-212ENST00000611107 HIGD1BQ9P298 99 aa5.16□□□□□ -1.58
SNCA-212ENST00000611107 LOC105371267A0A1B0GV96 52 aa5.14□□□□□ -1.59
SNCA-212ENST00000611107 ETDCA0A1B0GVM5 59 aa5.14□□□□□ -1.59
SNCA-212ENST00000611107 A4D1N5 150 aa5.14□□□□□ -1.59
SNCA-212ENST00000611107 B5MCH6 92 aa5.14□□□□□ -1.59
SNCA-212ENST00000611107 ZNF73O43830 326 aaPredicted RBP5.14□□□□□ -1.59
SNCA-212ENST00000611107 SMIM6P0DI80 62 aa5.14□□□□□ -1.59
SNCA-212ENST00000611107 Q6ZRX8 168 aa5.14□□□□□ -1.59
SNCA-212ENST00000611107 LINC00518Q8N0U6 118 aa5.14□□□□□ -1.59
SNCA-212ENST00000611107 OR13C6PQ8NH95 151 aa5.14□□□□□ -1.59
SNCA-212ENST00000611107 SMCR5Q8TEV8 140 aa5.14□□□□□ -1.59
SNCA-212ENST00000611107 HIST1H4GQ99525 98 aa5.14□□□□□ -1.59
SNCA-212ENST00000611107 A0A087X002 238 aa5.13□□□□□ -1.59
SNCA-212ENST00000611107 S100A12P80511 92 aa5.13□□□□□ -1.59
SNCA-212ENST00000611107 C12orf57Q99622 126 aa5.13□□□□□ -1.59
SNCA-212ENST00000611107 Q9BRP9 147 aa5.13□□□□□ -1.59
SNCA-212ENST00000611107 HIGD2AQ9BW72 106 aa5.13□□□□□ -1.59
SNCA-212ENST00000611107 RNF213Q63HN8 5207 aa5.11□□□□□ -1.59
SNCA-212ENST00000611107 TRAV13-2A0A0B4J235 113 aa5.11□□□□□ -1.59
SNCA-212ENST00000611107 A6NDN8 102 aa5.11□□□□□ -1.59
SNCA-212ENST00000611107 C6orf99Q4VX62 202 aa5.11□□□□□ -1.59
SNCA-212ENST00000611107 KRTAP13-2Q52LG2 175 aa5.11□□□□□ -1.59
SNCA-212ENST00000611107 UQCR10Q9UDW1 63 aa5.11□□□□□ -1.59
SNCA-212ENST00000611107 ERC2-IT1O76042 136 aa5.1□□□□□ -1.59
SNCA-212ENST00000611107 RPL13AP40429 203 aaKnown RBP5.1□□□□□ -1.59
SNCA-212ENST00000611107 FXYD2P54710 66 aa5.1□□□□□ -1.59
SNCA-212ENST00000611107 ELOF1P60002 83 aaKnown RBP5.1□□□□□ -1.59
SNCA-212ENST00000611107 TAL2Q16559 108 aa5.1□□□□□ -1.59
SNCA-212ENST00000611107 CEND1Q8N111 149 aa5.1□□□□□ -1.59
SNCA-212ENST00000611107 SPRR4Q96PI1 79 aa5.1□□□□□ -1.59
SNCA-212ENST00000611107 CBY1Q9Y3M2 126 aa5.1□□□□□ -1.59
SNCA-212ENST00000611107 HSD52Q0P140 79 aa5.09□□□□□ -1.59
SNCA-212ENST00000611107 SMIM11BQ8TCY0 68 aa5.09□□□□□ -1.59
SNCA-212ENST00000611107 PRO1933Q9H354 126 aa5.09□□□□□ -1.59
SNCA-212ENST00000611107 A0A0B4J2C4 111 aa5.08□□□□□ -1.6
SNCA-212ENST00000611107 CFC1BP0CG36 223 aa5.08□□□□□ -1.6
SNCA-212ENST00000611107 CFC1P0CG37 223 aa5.08□□□□□ -1.6
SNCA-212ENST00000611107 COX7BP24311 80 aa5.08□□□□□ -1.6
SNCA-212ENST00000611107 FAM229BQ4G0N7 80 aa5.08□□□□□ -1.6
SNCA-212ENST00000611107 TRBV7-6A0A0J9YX20 115 aa5.07□□□□□ -1.6
SNCA-212ENST00000611107 A0A1B0GWB2 263 aa5.07□□□□□ -1.6
SNCA-212ENST00000611107 ZNF706Q9Y5V0 76 aaPredicted RBP5.07□□□□□ -1.6
SNCA-212ENST00000611107 TMEM238LA0A1B0GVL6 79 aa5.06□□□□□ -1.6
SNCA-212ENST00000611107 A6NJY4 79 aa5.06□□□□□ -1.6
SNCA-212ENST00000611107 HINT1P49773 126 aaPredicted RBP5.06□□□□□ -1.6
SNCA-212ENST00000611107 LINC00483Q53H64 154 aa5.06□□□□□ -1.6
SNCA-212ENST00000611107 K7ERJ3 54 aa5.05□□□□□ -1.6
SNCA-212ENST00000611107 TSPAN13O95857 204 aa5.05□□□□□ -1.6
SNCA-212ENST00000611107 CRYGAP11844 174 aa5.05□□□□□ -1.6
SNCA-212ENST00000611107 C3orf22Q8N5N4 141 aa5.05□□□□□ -1.6
SNCA-212ENST00000611107 ST20-AS1Q8NBB2 130 aa5.05□□□□□ -1.6
SNCA-212ENST00000611107 RAB37Q96AX2 223 aa5.05□□□□□ -1.6
SNCA-212ENST00000611107 DHRS4-AS1Q9P1J3 65 aa5.05□□□□□ -1.6
SNCA-212ENST00000611107 H7C2G1 150 aa5.04□□□□□ -1.6
SNCA-212ENST00000611107 GAGE2AQ6NT46 116 aa5.04□□□□□ -1.6
SNCA-212ENST00000611107 NHP2Q9NX24 153 aaKnown RBP5.04□□□□□ -1.6
SNCA-212ENST00000611107 LINC01547P58512 204 aaPredicted RBP5.02□□□□□ -1.61
SNCA-212ENST00000611107 BVES-AS1Q5T3Y7 98 aa5.02□□□□□ -1.61
SNCA-212ENST00000611107 TYMSOSQ8TAI1 123 aa5.02□□□□□ -1.61
SNCA-212ENST00000611107 PRO1854Q9UHT4 67 aa5.02□□□□□ -1.61
SNCA-212ENST00000611107 TSTD3H0UI37 97 aa5.01□□□□□ -1.61
SNCA-212ENST00000611107 SPRR1BP22528 89 aa5.01□□□□□ -1.61
SNCA-212ENST00000611107 CTAG1AP78358 180 aa5.01□□□□□ -1.61
SNCA-212ENST00000611107 Q1RN00 199 aa5.01□□□□□ -1.61
SNCA-212ENST00000611107 LINC00575Q6W349 94 aa5.01□□□□□ -1.61
SNCA-212ENST00000611107 RETNLBQ9BQ08 111 aa5.01□□□□□ -1.61
SNCA-212ENST00000611107 IGLV5-48A0A075B6I7 105 aa5□□□□□ -1.61
SNCA-212ENST00000611107 TRIAP1O43715 76 aa5□□□□□ -1.61
SNCA-212ENST00000611107 FAM218AQ96MZ4 157 aa5□□□□□ -1.61
SNCA-212ENST00000611107 IGLV9-49A0A0B4J1Y8 123 aa4.99□□□□□ -1.61
SNCA-212ENST00000611107 MOBPQ13875 183 aa4.99□□□□□ -1.61
SNCA-212ENST00000611107 VAMP3Q15836 100 aa4.99□□□□□ -1.61
SNCA-212ENST00000611107 PRR4Q16378 134 aa4.99□□□□□ -1.61
SNCA-212ENST00000611107 Q6ZQY7 126 aa4.99□□□□□ -1.61
SNCA-212ENST00000611107 LINC00304Q8N9R0 145 aa4.99□□□□□ -1.61
SNCA-212ENST00000611107 MUC17Q685J3 4493 aa4.98□□□□□ -1.61
SNCA-212ENST00000611107 hADV29S1A0JD25 119 aa4.98□□□□□ -1.61
SNCA-212ENST00000611107 M0R143 59 aa4.98□□□□□ -1.61
SNCA-212ENST00000611107 SMIM29Q86T20 159 aa4.98□□□□□ -1.61
SNCA-212ENST00000611107 Q8NBF4 154 aa4.98□□□□□ -1.61
SNCA-212ENST00000611107 TEX49A0A1B0GTD5 131 aa4.97□□□□□ -1.61
SNCA-212ENST00000611107 SLC25A20O43772 301 aa4.97□□□□□ -1.61
SNCA-212ENST00000611107 C9orf153Q5TBE3 101 aa4.97□□□□□ -1.61
SNCA-212ENST00000611107 DEFB105AQ8NG35 78 aa4.97□□□□□ -1.61
SNCA-212ENST00000611107 Q8N377 158 aa4.96□□□□□ -1.62
SNCA-212ENST00000611107 CLEC2BQ92478 149 aa4.96□□□□□ -1.62
SNCA-212ENST00000611107 H0YGX0 51 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms