RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 FAM229BQ4G0N7 80 aa7.58□□□□□ -1.2
SNX20-205ENST00000610485 TYMSOSQ8TAI1 123 aa7.58□□□□□ -1.2
SNX20-205ENST00000610485 SPANXB1Q9NS25 103 aaPredicted RBP7.58□□□□□ -1.2
SNX20-205ENST00000610485 ANAPC11Q9NYG5 84 aa7.58□□□□□ -1.2
SNX20-205ENST00000610485 KRTAP13-2Q52LG2 175 aa7.57□□□□□ -1.2
SNX20-205ENST00000610485 MIR7-3HGQ8N6C7 128 aa7.57□□□□□ -1.2
SNX20-205ENST00000610485 M0R143 59 aa7.56□□□□□ -1.2
SNX20-205ENST00000610485 HINT1P49773 126 aaPredicted RBP7.56□□□□□ -1.2
SNX20-205ENST00000610485 PRR4Q16378 134 aa7.55□□□□□ -1.2
SNX20-205ENST00000610485 ADAMTSL4-AS1Q5T5F5 129 aa7.55□□□□□ -1.2
SNX20-205ENST00000610485 Q6ZVH6 145 aa7.55□□□□□ -1.2
SNX20-205ENST00000610485 CEND1Q8N111 149 aa7.55□□□□□ -1.2
SNX20-205ENST00000610485 LITAFQ99732 161 aa7.55□□□□□ -1.2
SNX20-205ENST00000610485 SPANXDQ9BXN6 97 aa7.55□□□□□ -1.2
SNX20-205ENST00000610485 SPANXCQ9NY87 97 aa7.55□□□□□ -1.2
SNX20-205ENST00000610485 TSPAN13O95857 204 aa7.54□□□□□ -1.2
SNX20-205ENST00000610485 BATFQ16520 125 aa7.54□□□□□ -1.2
SNX20-205ENST00000610485 PRYO14603 147 aa7.53□□□□□ -1.2
SNX20-205ENST00000610485 NCR3O14931 201 aa7.53□□□□□ -1.2
SNX20-205ENST00000610485 BVES-AS1Q5T3Y7 98 aa7.53□□□□□ -1.2
SNX20-205ENST00000610485 MUSTN1Q8IVN3 82 aa7.53□□□□□ -1.2
SNX20-205ENST00000610485 DAND5Q8N907 189 aa7.53□□□□□ -1.2
SNX20-205ENST00000610485 COPS9Q8WXC6 57 aa7.53□□□□□ -1.2
SNX20-205ENST00000610485 LOC107984156A0A0G2JMH3 177 aa7.52□□□□□ -1.21
SNX20-205ENST00000610485 IFITM1P13164 125 aa7.52□□□□□ -1.21
SNX20-205ENST00000610485 SPRR1AP35321 89 aa7.52□□□□□ -1.21
SNX20-205ENST00000610485 NPC2P61916 151 aa7.52□□□□□ -1.21
SNX20-205ENST00000610485 ARL17AQ8IVW1 177 aa7.52□□□□□ -1.21
SNX20-205ENST00000610485 HIGD2AQ9BW72 106 aa7.52□□□□□ -1.21
SNX20-205ENST00000610485 SNHG12Q9BXW3 62 aa7.52□□□□□ -1.21
SNX20-205ENST00000610485 KCNQ1DNQ9H478 68 aa7.52□□□□□ -1.21
SNX20-205ENST00000610485 LINC00337Q8N6G1 96 aa7.51□□□□□ -1.21
SNX20-205ENST00000610485 LINC00308Q8TCZ7 52 aa7.51□□□□□ -1.21
SNX20-205ENST00000610485 TMEM238LA0A1B0GVL6 79 aa7.5□□□□□ -1.21
SNX20-205ENST00000610485 A6NJY4 79 aa7.5□□□□□ -1.21
SNX20-205ENST00000610485 KRTAP4-16G5E9R7 235 aaPredicted RBP7.5□□□□□ -1.21
SNX20-205ENST00000610485 FXYD2P54710 66 aa7.5□□□□□ -1.21
SNX20-205ENST00000610485 LINC00304Q8N9R0 145 aa7.5□□□□□ -1.21
SNX20-205ENST00000610485 TRBV10-3A0A0K0K1G6 114 aa7.49□□□□□ -1.21
SNX20-205ENST00000610485 A6NDN8 102 aa7.49□□□□□ -1.21
SNX20-205ENST00000610485 SPRR4Q96PI1 79 aa7.49□□□□□ -1.21
SNX20-205ENST00000610485 A4D1N5 150 aa7.48□□□□□ -1.21
SNX20-205ENST00000610485 ZNF706Q9Y5V0 76 aaPredicted RBP7.48□□□□□ -1.21
SNX20-205ENST00000610485 TRBV10-2A0A0K0K1G8 114 aa7.47□□□□□ -1.21
SNX20-205ENST00000610485 SOSTDC1Q6X4U4 206 aa7.47□□□□□ -1.21
SNX20-205ENST00000610485 C3orf22Q8N5N4 141 aa7.47□□□□□ -1.21
SNX20-205ENST00000610485 PPDPFQ9H3Y8 114 aa7.47□□□□□ -1.21
SNX20-205ENST00000610485 NHP2Q9NX24 153 aaKnown RBP7.47□□□□□ -1.21
SNX20-205ENST00000610485 ETDCA0A1B0GVM5 59 aa7.46□□□□□ -1.22
SNX20-205ENST00000610485 EIF4EBP3O60516 100 aaPredicted RBP7.46□□□□□ -1.22
SNX20-205ENST00000610485 COL5A1-AS1Q5SY13 56 aa7.46□□□□□ -1.22
SNX20-205ENST00000610485 NDUFC2O95298 119 aa7.45□□□□□ -1.22
SNX20-205ENST00000610485 SMCR5Q8TEV8 140 aa7.45□□□□□ -1.22
SNX20-205ENST00000610485 B5MCH6 92 aa7.44□□□□□ -1.22
SNX20-205ENST00000610485 RAB37Q96AX2 223 aa7.44□□□□□ -1.22
SNX20-205ENST00000610485 CFC1BP0CG36 223 aa7.43□□□□□ -1.22
SNX20-205ENST00000610485 CFC1P0CG37 223 aa7.43□□□□□ -1.22
SNX20-205ENST00000610485 RETNLBQ9BQ08 111 aa7.43□□□□□ -1.22
SNX20-205ENST00000610485 A0A0B4J2C4 111 aa7.42□□□□□ -1.22
SNX20-205ENST00000610485 A0A1B0GWB2 263 aa7.42□□□□□ -1.22
SNX20-205ENST00000610485 K7ERJ3 54 aa7.42□□□□□ -1.22
SNX20-205ENST00000610485 IGLV6-57P01721 117 aa7.42□□□□□ -1.22
SNX20-205ENST00000610485 LINC00483Q53H64 154 aa7.42□□□□□ -1.22
SNX20-205ENST00000610485 SPAG11AQ6PDA7 123 aa7.42□□□□□ -1.22
SNX20-205ENST00000610485 PRO1854Q9UHT4 67 aa7.41□□□□□ -1.22
SNX20-205ENST00000610485 ERC2-IT1O76042 136 aa7.4□□□□□ -1.22
SNX20-205ENST00000610485 S100A7L2Q5SY68 101 aa7.4□□□□□ -1.22
SNX20-205ENST00000610485 Q6ZRX8 168 aa7.4□□□□□ -1.22
SNX20-205ENST00000610485 Q9BRP9 147 aa7.4□□□□□ -1.22
SNX20-205ENST00000610485 TRAV23DV6A0A075B6W5 121 aa7.39□□□□□ -1.23
SNX20-205ENST00000610485 TAX1BP3O14907 124 aa7.39□□□□□ -1.23
SNX20-205ENST00000610485 TRAV13-2A0A0B4J235 113 aa7.38□□□□□ -1.23
SNX20-205ENST00000610485 TPRXLQ17RH7 258 aa7.38□□□□□ -1.23
SNX20-205ENST00000610485 Q8NBF4 154 aa7.38□□□□□ -1.23
SNX20-205ENST00000610485 C9orf118A6NHY6 69 aa7.37□□□□□ -1.23
SNX20-205ENST00000610485 H7C2G1 150 aa7.37□□□□□ -1.23
SNX20-205ENST00000610485 Q1RN00 199 aa7.37□□□□□ -1.23
SNX20-205ENST00000610485 GAGE2AQ6NT46 116 aa7.37□□□□□ -1.23
SNX20-205ENST00000610485 OR13C6PQ8NH95 151 aa7.37□□□□□ -1.23
SNX20-205ENST00000610485 MUC2Q02817 5179 aa7.36□□□□□ -1.23
SNX20-205ENST00000610485 IGLV7-46A0A075B6I9 117 aa7.36□□□□□ -1.23
SNX20-205ENST00000610485 ZNF73O43830 326 aaPredicted RBP7.36□□□□□ -1.23
SNX20-205ENST00000610485 C4orf48Q5BLP8 95 aa7.36□□□□□ -1.23
SNX20-205ENST00000610485 H3BUT2 72 aa7.35□□□□□ -1.23
SNX20-205ENST00000610485 CBY1Q9Y3M2 126 aa7.35□□□□□ -1.23
SNX20-205ENST00000610485 PSMB2P49721 201 aa7.34□□□□□ -1.23
SNX20-205ENST00000610485 NAA38Q9BRA0 125 aaKnown RBP7.34□□□□□ -1.23
SNX20-205ENST00000610485 SPINK1P00995 79 aa7.33□□□□□ -1.24
SNX20-205ENST00000610485 MOBPQ13875 183 aa7.33□□□□□ -1.24
SNX20-205ENST00000610485 FP248Q71RG6 208 aaPredicted RBP7.33□□□□□ -1.24
SNX20-205ENST00000610485 MUC17Q685J3 4493 aa7.32□□□□□ -1.24
SNX20-205ENST00000610485 IGLV9-49A0A0B4J1Y8 123 aa7.32□□□□□ -1.24
SNX20-205ENST00000610485 SSBP3-AS1Q7Z2R9 100 aa7.32□□□□□ -1.24
SNX20-205ENST00000610485 CDIP1Q9H305 208 aa7.32□□□□□ -1.24
SNX20-205ENST00000610485 SCGB1C2P0DMR2 95 aa7.31□□□□□ -1.24
SNX20-205ENST00000610485 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
SNX20-205ENST00000610485 A0A1B0GV90 55 aa7.3□□□□□ -1.24
SNX20-205ENST00000610485 A0A1W2PPM0 123 aa7.3□□□□□ -1.24
SNX20-205ENST00000610485 COX6CP09669 75 aa7.3□□□□□ -1.24
SNX20-205ENST00000610485 FABP2P12104 132 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms