RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 IGLV8-61A0A075B6I0 122 aa13.76□□□□□ -0.21
SH3D19-211ENST00000604030 C9orf163Q8N9P6 203 aa13.75□□□□□ -0.21
SH3D19-211ENST00000604030 IGLV5-48A0A075B6I7 105 aa13.75□□□□□ -0.21
SH3D19-211ENST00000604030 ZNF462Q96JM2 2506 aa13.74□□□□□ -0.21
SH3D19-211ENST00000604030 IGLV5-37A0A075B6J1 123 aa13.74□□□□□ -0.21
SH3D19-211ENST00000604030 MTORP42345 2549 aa13.74□□□□□ -0.21
SH3D19-211ENST00000604030 SPINT4Q6UDR6 99 aa13.73□□□□□ -0.21
SH3D19-211ENST00000604030 PLA2G1BP04054 148 aaKnown RBP13.72□□□□□ -0.21
SH3D19-211ENST00000604030 KTN1-AS1Q86SY8 53 aa13.72□□□□□ -0.21
SH3D19-211ENST00000604030 A0A1W2PNM2 257 aa13.72□□□□□ -0.21
SH3D19-211ENST00000604030 CNBPP62633 177 aaKnown RBP13.69□□□□□ -0.22
SH3D19-211ENST00000604030 DSCR10P59022 87 aa13.69□□□□□ -0.22
SH3D19-211ENST00000604030 WWC2-AS2Q96NR7 200 aa13.69□□□□□ -0.22
SH3D19-211ENST00000604030 ANKRD17O75179 2603 aaKnown RBP13.68□□□□□ -0.22
SH3D19-211ENST00000604030 LCA10Q71F78 164 aa13.66□□□□□ -0.22
SH3D19-211ENST00000604030 KRTAP10-11P60412 298 aa13.62□□□□□ -0.23
SH3D19-211ENST00000604030 LINC00304Q8N9R0 145 aa13.62□□□□□ -0.23
SH3D19-211ENST00000604030 SPRR4Q96PI1 79 aa13.62□□□□□ -0.23
SH3D19-211ENST00000604030 CDC42SE1Q9NRR8 79 aa13.62□□□□□ -0.23
SH3D19-211ENST00000604030 F8P00451 2351 aa13.61□□□□□ -0.23
SH3D19-211ENST00000604030 OCR1Q9BZK8 76 aa13.61□□□□□ -0.23
SH3D19-211ENST00000604030 CRIPTQ9P021 101 aa13.61□□□□□ -0.23
SH3D19-211ENST00000604030 A0A087WTM6 91 aa13.6□□□□□ -0.23
SH3D19-211ENST00000604030 K7EIL1 84 aa13.6□□□□□ -0.23
SH3D19-211ENST00000604030 Q1T7F1 81 aa13.59□□□□□ -0.23
SH3D19-211ENST00000604030 WIPF1O43516 503 aa13.58□□□□□ -0.23
SH3D19-211ENST00000604030 ZNF575Q86XF7 245 aa13.58□□□□□ -0.24
SH3D19-211ENST00000604030 IGLV7-43P04211 117 aa13.56□□□□□ -0.24
SH3D19-211ENST00000604030 SPTBN4Q9H254 2564 aa13.55□□□□□ -0.24
SH3D19-211ENST00000604030 A0A1W2PNN7 141 aa13.54□□□□□ -0.24
SH3D19-211ENST00000604030 CHD8Q9HCK8 2581 aa13.53□□□□□ -0.24
SH3D19-211ENST00000604030 KRTAP10-3P60369 221 aa13.52□□□□□ -0.24
SH3D19-211ENST00000604030 FAM104AQ969W3 186 aa13.52□□□□□ -0.25
SH3D19-211ENST00000604030 POLQO75417 2590 aa13.49□□□□□ -0.25
SH3D19-211ENST00000604030 A0A0G2JQZ4 141 aa13.48□□□□□ -0.25
SH3D19-211ENST00000604030 PSORS1C2Q9UIG4 136 aa13.48□□□□□ -0.25
SH3D19-211ENST00000604030 ACANP16112 2415 aa13.45□□□□□ -0.26
SH3D19-211ENST00000604030 APLNQ9ULZ1 77 aa13.44□□□□□ -0.26
SH3D19-211ENST00000604030 EP400Q96L91 3159 aa13.43□□□□□ -0.26
SH3D19-211ENST00000604030 IGLV7-46A0A075B6I9 117 aa13.42□□□□□ -0.26
SH3D19-211ENST00000604030 CASC10Q5T4H9 136 aa13.38□□□□□ -0.27
SH3D19-211ENST00000604030 Q75L30 129 aa13.35□□□□□ -0.27
SH3D19-211ENST00000604030 KRTAP1-3Q8IUG1 177 aa13.35□□□□□ -0.27
SH3D19-211ENST00000604030 ANAPC11Q9NYG5 84 aa13.32□□□□□ -0.28
SH3D19-211ENST00000604030 C9orf92A6NGG3 77 aa13.3□□□□□ -0.28
SH3D19-211ENST00000604030 RBM12B-AS1Q9P1G2 102 aa13.29□□□□□ -0.28
SH3D19-211ENST00000604030 CENPFP49454 3210 aa13.29□□□□□ -0.28
SH3D19-211ENST00000604030 KRTAP1-1Q07627 177 aa13.28□□□□□ -0.28
SH3D19-211ENST00000604030 LINC01558Q9Y6Z2 57 aa13.26□□□□□ -0.29
SH3D19-211ENST00000604030 SPRR1AP35321 89 aa13.25□□□□□ -0.29
SH3D19-211ENST00000604030 SRCAPQ6ZRS2 3230 aa13.25□□□□□ -0.29
SH3D19-211ENST00000604030 FASNP49327 2511 aaKnown RBP13.25□□□□□ -0.29
SH3D19-211ENST00000604030 PRR26Q8N8Z3 221 aa13.25□□□□□ -0.29
SH3D19-211ENST00000604030 COX6B2Q6YFQ2 88 aa13.23□□□□□ -0.29
SH3D19-211ENST00000604030 J3QL48 77 aa13.22□□□□□ -0.29
SH3D19-211ENST00000604030 FAM229BQ4G0N7 80 aa13.21□□□□□ -0.29
SH3D19-211ENST00000604030 Q8N1X5 172 aa13.21□□□□□ -0.29
SH3D19-211ENST00000604030 Q5XG85 94 aa13.21□□□□□ -0.3
SH3D19-211ENST00000604030 MMP24-AS1A0A0U1RRL7 71 aa13.18□□□□□ -0.3
SH3D19-211ENST00000604030 Q8N9P0 234 aaPredicted RBP13.18□□□□□ -0.3
SH3D19-211ENST00000604030 SPRR1BP22528 89 aa13.17□□□□□ -0.3
SH3D19-211ENST00000604030 HRES1P13985 223 aa13.16□□□□□ -0.3
SH3D19-211ENST00000604030 A0A1B0GU33 70 aa13.11□□□□□ -0.31
SH3D19-211ENST00000604030 FP248Q71RG6 208 aaPredicted RBP13.1□□□□□ -0.31
SH3D19-211ENST00000604030 CR1P17927 2039 aa13.09□□□□□ -0.31
SH3D19-211ENST00000604030 A0A0D9SG42 100 aa13.06□□□□□ -0.32
SH3D19-211ENST00000604030 SMR3BP02814 79 aaPredicted RBP13.05□□□□□ -0.32
SH3D19-211ENST00000604030 Q8NDZ9 215 aa13.04□□□□□ -0.32
SH3D19-211ENST00000604030 LINC00472Q9H8W2 130 aa13.04□□□□□ -0.32
SH3D19-211ENST00000604030 PLAC8Q9NZF1 115 aa13.04□□□□□ -0.32
SH3D19-211ENST00000604030 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.02□□□□□ -0.33
SH3D19-211ENST00000604030 LUZP6Q538Z0 58 aa13.02□□□□□ -0.33
SH3D19-211ENST00000604030 CYSTM1Q9H1C7 97 aa13□□□□□ -0.33
SH3D19-211ENST00000604030 ZCCHC13Q8WW36 166 aaKnown RBP12.99□□□□□ -0.33
SH3D19-211ENST00000604030 EPG5Q9HCE0 2579 aa12.99□□□□□ -0.33
SH3D19-211ENST00000604030 LINC01554Q52M75 96 aa12.98□□□□□ -0.33
SH3D19-211ENST00000604030 Q5VV11 94 aa12.98□□□□□ -0.33
SH3D19-211ENST00000604030 DMAC1Q96GE9 116 aa12.97□□□□□ -0.33
SH3D19-211ENST00000604030 TNP2Q05952 138 aa12.95□□□□□ -0.34
SH3D19-211ENST00000604030 Q5W150 140 aa12.9□□□□□ -0.34
SH3D19-211ENST00000604030 Q6ZSA8 131 aa12.89□□□□□ -0.35
SH3D19-211ENST00000604030 KRTAP26-1Q6PEX3 210 aa12.85□□□□□ -0.35
SH3D19-211ENST00000604030 USP24Q9UPU5 2620 aa12.84□□□□□ -0.35
SH3D19-211ENST00000604030 MGAM2Q2M2H8 2515 aa12.82□□□□□ -0.36
SH3D19-211ENST00000604030 LINC00483Q53H64 154 aa12.79□□□□□ -0.36
SH3D19-211ENST00000604030 ASB16-AS1Q495Z4 193 aa12.79□□□□□ -0.36
SH3D19-211ENST00000604030 CSAG1Q6PB30 78 aa12.77□□□□□ -0.36
SH3D19-211ENST00000604030 SPINK7P58062 85 aa12.76□□□□□ -0.37
SH3D19-211ENST00000604030 CAMK2N1Q7Z7J9 78 aa12.75□□□□□ -0.37
SH3D19-211ENST00000604030 OXTP01178 125 aa12.75□□□□□ -0.37
SH3D19-211ENST00000604030 FLNAP21333 2647 aaKnown RBP12.73□□□□□ -0.37
SH3D19-211ENST00000604030 Q6ZR54 194 aa12.73□□□□□ -0.37
SH3D19-211ENST00000604030 S4R3F8 94 aa12.72□□□□□ -0.37
SH3D19-211ENST00000604030 PRRC2CQ9Y520 2896 aaKnown RBP12.72□□□□□ -0.37
SH3D19-211ENST00000604030 HECTD1Q9ULT8 2610 aa12.72□□□□□ -0.37
SH3D19-211ENST00000604030 PRAC1Q96KF2 57 aa12.69□□□□□ -0.38
SH3D19-211ENST00000604030 KRTAP4-16G5E9R7 235 aaPredicted RBP12.68□□□□□ -0.38
SH3D19-211ENST00000604030 KRTAP29-1A8MX34 341 aaPredicted RBP12.65□□□□□ -0.38
SH3D19-211ENST00000604030 FLNBO75369 2602 aaKnown RBP12.64□□□□□ -0.39
SH3D19-211ENST00000604030 ITPR3Q14573 2671 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms