RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ST20-AS1Q8NBB2 130 aa5.95□□□□□ -1.46
CSMD1-216ENST00000602557 Q8NBF4 154 aa5.95□□□□□ -1.46
CSMD1-216ENST00000602557 TRBV7-4A0A0J9YYF1 115 aa5.94□□□□□ -1.46
CSMD1-216ENST00000602557 LINC00315P59091 139 aa5.94□□□□□ -1.46
CSMD1-216ENST00000602557 K7EQZ3 153 aa5.94□□□□□ -1.46
CSMD1-216ENST00000602557 IGLV5-45A0A087WSX0 123 aa5.94□□□□□ -1.46
CSMD1-216ENST00000602557 C10orf142B7Z368 130 aa5.93□□□□□ -1.46
CSMD1-216ENST00000602557 LINC00167Q96N53 147 aa5.93□□□□□ -1.46
CSMD1-216ENST00000602557 LINC00476Q8WZB0 136 aa5.93□□□□□ -1.46
CSMD1-216ENST00000602557 ELOF1P60002 83 aaKnown RBP5.93□□□□□ -1.46
CSMD1-216ENST00000602557 CHTF8P0CG12 524 aa5.92□□□□□ -1.46
CSMD1-216ENST00000602557 EIF4EBP3O60516 100 aaPredicted RBP5.91□□□□□ -1.46
CSMD1-216ENST00000602557 UQCR11O14957 56 aa5.91□□□□□ -1.46
CSMD1-216ENST00000602557 Q5XG85 94 aa5.9□□□□□ -1.46
CSMD1-216ENST00000602557 Q6ZRX8 168 aa5.9□□□□□ -1.46
CSMD1-216ENST00000602557 PRAC1Q96KF2 57 aa5.9□□□□□ -1.47
CSMD1-216ENST00000602557 EPM2AB3EWF7 344 aa5.89□□□□□ -1.47
CSMD1-216ENST00000602557 C9orf129Q5T035 196 aaKnown RBP5.88□□□□□ -1.47
CSMD1-216ENST00000602557 CDC42SE1Q9NRR8 79 aa5.88□□□□□ -1.47
CSMD1-216ENST00000602557 CFAP54Q96N23 3096 aa5.88□□□□□ -1.47
CSMD1-216ENST00000602557 CRIPTQ9P021 101 aa5.88□□□□□ -1.47
CSMD1-216ENST00000602557 APLNQ9ULZ1 77 aa5.87□□□□□ -1.47
CSMD1-216ENST00000602557 FAM229BQ4G0N7 80 aa5.87□□□□□ -1.47
CSMD1-216ENST00000602557 C5orf42Q9H799 3197 aa5.87□□□□□ -1.47
CSMD1-216ENST00000602557 PHF5AQ7RTV0 110 aaKnown RBP5.86□□□□□ -1.47
CSMD1-216ENST00000602557 A0A0G2JQZ4 141 aa5.86□□□□□ -1.47
CSMD1-216ENST00000602557 A0A1W2PNN7 141 aa5.86□□□□□ -1.47
CSMD1-216ENST00000602557 FAM168BA1KXE4 195 aa5.85□□□□□ -1.47
CSMD1-216ENST00000602557 NBEAL2Q6ZNJ1 2754 aa5.85□□□□□ -1.47
CSMD1-216ENST00000602557 A8MWP4 228 aa5.85□□□□□ -1.47
CSMD1-216ENST00000602557 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
CSMD1-216ENST00000602557 ITPR2Q14571 2701 aa5.84□□□□□ -1.48
CSMD1-216ENST00000602557 LINC00313P59037 77 aa5.84□□□□□ -1.48
CSMD1-216ENST00000602557 A0A1B0GW54 56 aa5.83□□□□□ -1.48
CSMD1-216ENST00000602557 Q1T7F1 81 aa5.83□□□□□ -1.48
CSMD1-216ENST00000602557 RTL8CO15255 209 aa5.83□□□□□ -1.48
CSMD1-216ENST00000602557 C16orf90A8MZG2 172 aa5.83□□□□□ -1.48
CSMD1-216ENST00000602557 IGLV6-57P01721 117 aa5.82□□□□□ -1.48
CSMD1-216ENST00000602557 TRANK1O15050 2925 aa5.82□□□□□ -1.48
CSMD1-216ENST00000602557 GVQW2A0A096LPI5 108 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-216ENST00000602557 LINC01554Q52M75 96 aa5.81□□□□□ -1.48
CSMD1-216ENST00000602557 NSD1Q96L73 2696 aaPredicted RBP5.81□□□□□ -1.48
CSMD1-216ENST00000602557 A0A0D9SG42 100 aa5.81□□□□□ -1.48
CSMD1-216ENST00000602557 TYMSOSQ8TAI1 123 aa5.81□□□□□ -1.48
CSMD1-216ENST00000602557 Q96NJ1 140 aa5.8□□□□□ -1.48
CSMD1-216ENST00000602557 Q6ZRP5 223 aa5.8□□□□□ -1.48
CSMD1-216ENST00000602557 LINC00588Q9Y4M8 146 aa5.8□□□□□ -1.48
CSMD1-216ENST00000602557 FP248Q71RG6 208 aaPredicted RBP5.8□□□□□ -1.48
CSMD1-216ENST00000602557 Q8NAQ8 132 aa5.8□□□□□ -1.48
CSMD1-216ENST00000602557 PCNTO95613 3336 aa5.79□□□□□ -1.48
CSMD1-216ENST00000602557 NBDYA0A0U1RRE5 68 aa5.79□□□□□ -1.48
CSMD1-216ENST00000602557 DSPP15924 2871 aaKnown RBP5.79□□□□□ -1.48
CSMD1-216ENST00000602557 H3BNG1 76 aa5.78□□□□□ -1.48
CSMD1-216ENST00000602557 UBR5O95071 2799 aaPredicted RBP5.77□□□□□ -1.49
CSMD1-216ENST00000602557 IGFL1Q6UW32 110 aa5.76□□□□□ -1.49
CSMD1-216ENST00000602557 UTP20O75691 2785 aaKnown RBP5.76□□□□□ -1.49
CSMD1-216ENST00000602557 DSCR10P59022 87 aa5.76□□□□□ -1.49
CSMD1-216ENST00000602557 APCP25054 2843 aa5.76□□□□□ -1.49
CSMD1-216ENST00000602557 MRPL34Q9BQ48 92 aaKnown RBP5.76□□□□□ -1.49
CSMD1-216ENST00000602557 OBSCN-AS1Q96MR7 158 aa5.75□□□□□ -1.49
CSMD1-216ENST00000602557 C8orf17Q9NRJ1 99 aa5.75□□□□□ -1.49
CSMD1-216ENST00000602557 MGAQ8IWI9 3026 aa5.75□□□□□ -1.49
CSMD1-216ENST00000602557 DNAH10OSP0CZ25 163 aa5.75□□□□□ -1.49
CSMD1-216ENST00000602557 CSAG1Q6PB30 78 aa5.75□□□□□ -1.49
CSMD1-216ENST00000602557 Q75L30 129 aa5.74□□□□□ -1.49
CSMD1-216ENST00000602557 FAM229AH3BQW9 127 aa5.74□□□□□ -1.49
CSMD1-216ENST00000602557 OXTP01178 125 aa5.74□□□□□ -1.49
CSMD1-216ENST00000602557 SPANXA2-OT1Q8N9U9 137 aa5.73□□□□□ -1.49
CSMD1-216ENST00000602557 OCR1Q9BZK8 76 aa5.73□□□□□ -1.49
CSMD1-216ENST00000602557 KRTAP24-1Q3LI83 254 aa5.72□□□□□ -1.49
CSMD1-216ENST00000602557 LINC00528Q8N1L1 170 aa5.72□□□□□ -1.49
CSMD1-216ENST00000602557 PRR26Q8N8Z3 221 aa5.71□□□□□ -1.5
CSMD1-216ENST00000602557 LAMA2P24043 3122 aaKnown RBP5.71□□□□□ -1.5
CSMD1-216ENST00000602557 KCNQ1DNQ9H478 68 aa5.71□□□□□ -1.5
CSMD1-216ENST00000602557 Q8N1X5 172 aa5.7□□□□□ -1.5
CSMD1-216ENST00000602557 Q8N377 158 aa5.7□□□□□ -1.5
CSMD1-216ENST00000602557 A0A1B0GVX0 72 aa5.69□□□□□ -1.5
CSMD1-216ENST00000602557 Q5VV11 94 aa5.69□□□□□ -1.5
CSMD1-216ENST00000602557 ITPR1Q14643 2758 aa5.69□□□□□ -1.5
CSMD1-216ENST00000602557 LUZP6Q538Z0 58 aa5.69□□□□□ -1.5
CSMD1-216ENST00000602557 CSNK1G2-AS1Q8NCQ2 148 aa5.69□□□□□ -1.5
CSMD1-216ENST00000602557 IGLV1-50A0A075B6I6 118 aa5.68□□□□□ -1.5
CSMD1-216ENST00000602557 C9orf92A6NGG3 77 aa5.68□□□□□ -1.5
CSMD1-216ENST00000602557 C15orf56Q8N910 161 aa5.68□□□□□ -1.5
CSMD1-216ENST00000602557 FLNCQ14315 2725 aa5.68□□□□□ -1.5
CSMD1-216ENST00000602557 FAM104AQ969W3 186 aa5.68□□□□□ -1.5
CSMD1-216ENST00000602557 IGSF10Q6WRI0 2623 aa5.67□□□□□ -1.5
CSMD1-216ENST00000602557 COX6B2Q6YFQ2 88 aa5.66□□□□□ -1.5
CSMD1-216ENST00000602557 SPINK7P58062 85 aa5.66□□□□□ -1.5
CSMD1-216ENST00000602557 LINC00304Q8N9R0 145 aa5.66□□□□□ -1.5
CSMD1-216ENST00000602557 CHD7Q9P2D1 2997 aa5.66□□□□□ -1.5
CSMD1-216ENST00000602557 C9orf163Q8N9P6 203 aa5.66□□□□□ -1.5
CSMD1-216ENST00000602557 UTRNP46939 3433 aa5.65□□□□□ -1.5
CSMD1-216ENST00000602557 A0A1W2PNM2 257 aa5.65□□□□□ -1.5
CSMD1-216ENST00000602557 KRTAP10-11P60412 298 aa5.65□□□□□ -1.5
CSMD1-216ENST00000602557 Q8N9P0 234 aaPredicted RBP5.65□□□□□ -1.51
CSMD1-216ENST00000602557 ANAPC11Q9NYG5 84 aa5.64□□□□□ -1.51
CSMD1-216ENST00000602557 J3QL48 77 aa5.64□□□□□ -1.51
CSMD1-216ENST00000602557 IGLV5-48A0A075B6I7 105 aa5.63□□□□□ -1.51
CSMD1-216ENST00000602557 KMT2BQ9UMN6 2715 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms